BAC Information

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BAC

Clone NameB6Ng01-134B18
Chromosome1 (Build37)
Map Location 163,568,522 - 163,717,587
singlet/doubletdoublet
Overlap geneLOC100039623, LOC269134, Fasl
Upstream geneRabgap1l, EG620750, Rc3h1, Serpinc1, Zbtb37, Gas5, Dars2, Cenpl, Klhl20, Ankrd45, 4930469G21Rik, EG665117, EG640200, EG620839, Prdx6, Tnfsf4, Tnfsf18, EG435650
Downstream geneAI848100, EG665109, Pigc, Dnm3, LOC100039703, Dnm3os, 5630401D24Rik, Vamp4, LOC435651, Myoc, Bat2d
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-134B18.bB6Ng01-134B18.g
ACCDH934488DH934489
length1,146938
definitionDH934488|Mus musculus domesticus DNA, BAC clone: B6Ng01-134B18, 5' end.DH934489|Mus musculus domesticus DNA, BAC clone: B6Ng01-134B18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(163,716,427 - 163,717,587)(163,568,522 - 163,569,459)
sequence
gaattcaaggcaaatacttattcctctctgagttgtcaagggtgtttgat
gagcttctcgctgcttcatgtttagtgattcaaggatgaaaatcaatttt
gtgtcttgttcagaagtgtaaataaattaattttcttcaaagagacttag
aagtcttactactactctagatacaattgtgtggctaaaccctaactcgg
gccaggtctgacatatctgagtcctctttctatggattgctgtgacttct
gcttccttggcttaaataactgcacatttattctatgactctctttctct
cactagttcaccaaccaaagccttaaagtatcatcttttgaaaagcaaat
aggtaagtacttttatgtctgccttgtgagttcccatagctggtcttcaa
cactcaataaagttgggaggatgcctaggattctgtgcctttcttgggct
tatgtttcctaggcatgaaaccctgaggagcttttgactcttcgttcagt
gtggttctgtgaacgatgtgaaaatattgactgtagcttattgctcaata
tcagtgtatctgaatgaacactgcccacaactcaaacgaatttggacttg
actttggaaagagacacacatatagccctggaccttctcccttggctcct
tccaagggtatcttggtcccatcttacgttgtggtggctgtaactcctag
ggacagaaggggagtagaggcaaaaatactagatgtaaaatactagacca
attaggttcagtgcccaagcctcctgtctgaaactgggactaggagaaca
gtcccccagtgccttgttacctattaggactatacaatgcatagagaaac
ttccacctcttagtcgtggcccagaatgagaagcaaatacaaagctggtt
tcctttgtaagggcaacatgacaagtgtattctaataactttgagaaacc
aaaccatccataaaaggggatggatccaccacagtgcagtttggtctact
tgtgagtcctcacactggaggagggggttgttccctgatcttttgctcct
gtagatccatccctaattgggctgcttggtctggtctcatggagagtatt
gtgttcttagtctgatgacttgattgctaagtgattgatacagggt
gaattctcatgtacatcaagtttctttgtgcaaaccttcctccccaagtt
aattggtcaataaaaggctaaagcctatgattgtgcagtagatagaggta
ggtgggttttcagttacctggttggggccataggaagagaggaaagagga
aggaaaaaagacatggaaggaagaggaggaggccaccatgagaggagatg
caccacaatcacatggccaagagaaacagcaagtaacaaggaacacagag
ctgcgatgcaagttagaattgttccaaaacctgcccaatctaggtttgga
gcttataaataaaatgcctggattgtgtgtcttttttattttattttaac
ctttttaatttttttacttaaagataacaaccacttacttccttttactt
ctgttgcataaaacttctcagctgggctgattaagtcatgggcactcatc
tatagacactaacatacaaggcatcagaactgacctactctaggactgca
ctgacaatttttttttcacagttaagtattttttattagatattttcttt
atttacatttcaaatgttatcccccttcctagtttcccctccaaaaatcc
cctttgtccccccccccccactgctccccaacccacccactcccacttcc
tggccctgggcattcccctatactgggacatagagccttcacaggatcaa
gggcctcttctcccattgatgaccgactaggccatcctctgctacatatg
cagctagagccatgagtcccaccctgtgtttttgttgattggtatttagt
cccagggatctctagggatactggttagttcaaatttgttgttctcctat
gggcctgcaaaccccttcagcttcttgggtactttcttctagctccttca
atggggaccctgtgcttcttccatggatggctgtgagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_163716427_163717587
seq2: B6Ng01-134B18.b_46_1191 (reverse)

seq1  ACCCTGTATCAATCCACTCTAGCACATCAAGTCACTCAGGACTA--GACA  48
      ||||||||||||| |||| ||||| ||||||||| ||| |||||   |||
seq2  ACCCTGTATCAAT-CACT-TAGCA-ATCAAGTCA-TCA-GACTAAGAACA  45

seq1  C-ATACTCTCCCACTGAGACCAGACAAGGCAGCCCAATTAGGGGAATGGG  97
      | |||||||||   ||||||||||| | |||||||||||||||  || ||
seq2  CAATACTCTCC--ATGAGACCAGACCAAGCAGCCCAATTAGGG--AT-GG  90

seq1  ATCTACAGGAAGGCAAAAGATTCAGGG-ACAACCCCCT-CTCCAGTTGTT  145
      ||||||||||  |||||||| |||||| |||||||||| |||||||   |
seq2  ATCTACAGGA--GCAAAAGA-TCAGGGAACAACCCCCTCCTCCAGT--GT  135

seq1  GAGGGACTCACATGTAGACCAAACTGCACTGTGGTGGATCCATCCCCTTT  195
      || ||||||||| |||||||||||||||||||||||||||||||||| ||
seq2  GA-GGACTCACAAGTAGACCAAACTGCACTGTGGTGGATCCATCCCC-TT  183

seq1  TTATGGATGGTTTGGTTTTCTTCAAAGTTATTAGAATACACTTGTCATGT  245
      ||||||||||||||||||   |||||||||||||||||||||||||||||
seq2  TTATGGATGGTTTGGTTT--CTCAAAGTTATTAGAATACACTTGTCATGT  231

seq1  TGCCCTTACAAAGGAAACCAGCTTTGTATTTGCTTCTCATTTCTGGGCCA  295
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TGCCCTTACAAAGGAAACCAGCTTTGTATTTGCTTCTCA-TTCTGGGCCA  280

seq1  CGACTAAGAGGTGGAAGTTTCTCTATGCATTGTATAGTCCTAATAGGTAA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACTAAGAGGTGGAAGTTTCTCTATGCATTGTATAGTCCTAATAGGTAA  330

seq1  CAAGGCACTGGGGGACTGTTCTCCTAGTCCCAGTTTCAGACAGGAGGCTT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCACTGGGGGACTGTTCTCCTAGTCCCAGTTTCAGACAGGAGGCTT  380

seq1  GGGCACTGAACCTAATTGGTCTAGTATTTTACATCTAGTATTTTTGCCTC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCACTGAACCTAATTGGTCTAGTATTTTACATCTAGTATTTTTGCCTC  430

seq1  TACTCCCCTTCTGTCCCTAGGAGTTACAGCCACCACAACGTAAGATGGGA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCCCCTTCTGTCCCTAGGAGTTACAGCCACCACAACGTAAGATGGGA  480

seq1  CCAAGATACCCTTGGAAGGAGCCAAGGGAGAAGGTCCAGGGCTATATGTG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGATACCCTTGGAAGGAGCCAAGGGAGAAGGTCCAGGGCTATATGTG  530

seq1  TGTCTCTTTCCAAAGTCAAGTCCAAATTCGTTTGAGTTGTGGGCAGTGTT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTTTCCAAAGTCAAGTCCAAATTCGTTTGAGTTGTGGGCAGTGTT  580

seq1  CATTCAGATACACTGATATTGAGCAATAAGCTACAGTCAATATTTTCACA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCAGATACACTGATATTGAGCAATAAGCTACAGTCAATATTTTCACA  630

seq1  TCGTTCACAGAACCACACTGAACGAAGAGTCAAAAGCTCCTCAGGGTTTC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTCACAGAACCACACTGAACGAAGAGTCAAAAGCTCCTCAGGGTTTC  680

seq1  ATGCCTAGGAAACATAAGCCCAAGAAAGGCACAGAATCCTAGGCATCCTC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTAGGAAACATAAGCCCAAGAAAGGCACAGAATCCTAGGCATCCTC  730

seq1  CCAACTTTATTGAGTGTTGAAGACCAGCTATGGGAACTCACAAGGCAGAC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTTTATTGAGTGTTGAAGACCAGCTATGGGAACTCACAAGGCAGAC  780

seq1  ATAAAAGTACTTACCTATTTGCTTTTCAAAAGATGATACTTTAAGGCTTT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAGTACTTACCTATTTGCTTTTCAAAAGATGATACTTTAAGGCTTT  830

seq1  GGTTGGTGAACTAGTGAGAGAAAGAGAGTCATAGAATAAATGTGCAGTTA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGGTGAACTAGTGAGAGAAAGAGAGTCATAGAATAAATGTGCAGTTA  880

seq1  TTTAAGCCAAGGAAGCAGAAGTCACAGCAATCCATAGAAAGAGGACTCAG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGCCAAGGAAGCAGAAGTCACAGCAATCCATAGAAAGAGGACTCAG  930

seq1  ATATGTCAGACCTGGCCCGAGTTAGGGTTTAGCCACACAATTGTATCTAG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTCAGACCTGGCCCGAGTTAGGGTTTAGCCACACAATTGTATCTAG  980

seq1  AGTAGTAGTAAGACTTCTAAGTCTCTTTGAAGAAAATTAATTTATTTACA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTAGTAAGACTTCTAAGTCTCTTTGAAGAAAATTAATTTATTTACA  1030

seq1  CTTCTGAACAAGACACAAAATTGATTTTCATCCTTGAATCACTAAACATG  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGAACAAGACACAAAATTGATTTTCATCCTTGAATCACTAAACATG  1080

seq1  AAGCAGCGAGAAGCTCATCAAACACCCTTGACAACTCAGAGAGGAATAAG  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGCGAGAAGCTCATCAAACACCCTTGACAACTCAGAGAGGAATAAG  1130

seq1  TATTTGCCTTGAATTC  1161
      ||||||||||||||||
seq2  TATTTGCCTTGAATTC  1146

seq1: chr1_163568522_163569459
seq2: B6Ng01-134B18.g_69_1006

seq1  GAATTCTCATGTACATCAAGTTTCTTTGTGCAAACCTTCCTCCCCAAGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATGTACATCAAGTTTCTTTGTGCAAACCTTCCTCCCCAAGTT  50

seq1  AATTGGTCAATAAAAGGCTAAAGCCTATGATTGTGCAGTAGATAGAGGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGTCAATAAAAGGCTAAAGCCTATGATTGTGCAGTAGATAGAGGTA  100

seq1  GGTGGGTTTTCAGTTACCTGGTTGGGGCCATAGGAAGAGAGGAAAGAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGTTTTCAGTTACCTGGTTGGGGCCATAGGAAGAGAGGAAAGAGGA  150

seq1  AGGAAAAAAGACATGGAAGGAAGAGGAGGAGGCCACCATGAGAGGAGATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAAAAGACATGGAAGGAAGAGGAGGAGGCCACCATGAGAGGAGATG  200

seq1  CACCACAATCACATGGCCAAGAGAAACAGCAAGTAACAAGGAACACAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACAATCACATGGCCAAGAGAAACAGCAAGTAACAAGGAACACAGAG  250

seq1  CTGCGATGCAAGTTAGAATTGTTCCAAAACCTGCCCAATCTAGGTTTGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCGATGCAAGTTAGAATTGTTCCAAAACCTGCCCAATCTAGGTTTGGA  300

seq1  GCTTATAAATAAAATGCCTGGATTGTGTGTCTTTTTTATTTTATTTTAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTATAAATAAAATGCCTGGATTGTGTGTCTTTTTTATTTTATTTTAAC  350

seq1  CTTTTTAATTTTTTTACTTAAAGATAACAACCACTTACTTCCTTTTACTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTAATTTTTTTACTTAAAGATAACAACCACTTACTTCCTTTTACTT  400

seq1  CTGTTGCATAAAACTTCTCAGCTGGGCTGATTAAGTCATGGGCACTCATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGCATAAAACTTCTCAGCTGGGCTGATTAAGTCATGGGCACTCATC  450

seq1  TATAGACACTAACATACAAGGCATCAGAACTGACCTACTCTAGGACTGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGACACTAACATACAAGGCATCAGAACTGACCTACTCTAGGACTGCA  500

seq1  CTGACAATTTTTTTTTCACAGTTAAGTATTTTTTATTAGATATTTTCTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACAATTTTTTTTTCACAGTTAAGTATTTTTTATTAGATATTTTCTTT  550

seq1  ATTTACATTTCAAATGTTATCCCCCTTCCTAGTTTCCCCTCCAAAAATCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACATTTCAAATGTTATCCCCCTTCCTAGTTTCCCCTCCAAAAATCC  600

seq1  CCTTTGTCCCCCCCCCCCCACTGCTCCCCAACCCACCCACTCCCACTTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGTCCCCCCCCCCCCACTGCTCCCCAACCCACCCACTCCCACTTCC  650

seq1  TGGCCCT-GGCATTCCCCTATACTGGGACATAGAGCCTTCACAGGATCAA  699
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCCTGGGCATTCCCCTATACTGGGACATAGAGCCTTCACAGGATCAA  700

seq1  GGGCCTCTTCTCCCATTGATGACCGACTAGGCCATCCTCTGCTACATATG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTCTTCTCCCATTGATGACCGACTAGGCCATCCTCTGCTACATATG  750

seq1  CAGCTAGAGCCATGAGTCCCACCCTGTGTTTTTGTTGATTGGTAATTTAG  799
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CAGCTAGAGCCATGAGTCCCACCCTGTGTTTTTGTTGATTGGT-ATTTAG  799

seq1  TCCCAGGGATCTCTAGGGATACTGGTTAGTTCATA-TTGTTGTTCCTCCT  848
      ||||||||||||||||||||||||||||||||| | |||||||| |||||
seq2  TCCCAGGGATCTCTAGGGATACTGGTTAGTTCAAATTTGTTGTT-CTCCT  848

seq1  ATGGGCCTGCAAACCCCTTCAGCTTCTTGGGTACTTTC-TCTAGCTCCTT  897
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  ATGGGCCTGCAAACCCCTTCAGCTTCTTGGGTACTTTCTTCTAGCTCCTT  898

seq1  CATTGGGGACCCTGTGCTTCATCCAATGGATGGCTGTGAGC  938
      || ||||||||||||||||| ||| ||||||||||||||||
seq2  CAATGGGGACCCTGTGCTTCTTCC-ATGGATGGCTGTGAGC  938