BAC Information

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BAC

Clone NameB6Ng01-134J15
Chromosome1 (Build37)
Map Location 161,907,076 - 162,058,766
singlet/doubletdoublet
Overlap gene4930523C07Rik, 4930562F07Rik, Tnn
Upstream gene4930562F17Rik, EG240853, LOC664972, Rfwd2, EG620484, Tnr
Downstream geneMrps14, Cacybp, Rabgap1l, Gpr52, EG620750, Rc3h1, Serpinc1, Zbtb37, Gas5, Dars2, Cenpl, Klhl20
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-134J15.bB6Ng01-134J15.g
ACCDH934858DH934859
length9611,201
definitionDH934858|Mus musculus domesticus DNA, BAC clone: B6Ng01-134J15, 5' end.DH934859|Mus musculus domesticus DNA, BAC clone: B6Ng01-134J15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(162,058,246 - 162,058,766)(161,907,076 - 161,907,997)
sequence
gaattcacttaaagcaatgggtgcacatcacttttgttgctgtgataaaa
cactgaccaaaaccaatgtgaggaggaaagcatctgagaagggacccctg
aagagagcctggaaggacaggtgggagctaacggggaagtcacctgtgca
aaggcctcagggatgaggttgagcagttggtaatctcaagtgtcctttat
ggtaggcaggtctgtgacgtggtaaaatagcaaggatggggcctggacat
taaagtgtcccaggagttagaccctttattgttccacgatgacaacagtg
atatagccccatctctgtgcttcttaaggtcagttgtctcatgggaccac
ttgtcactgctaggtctggcccgtggtggtgtgcagggtgaaatgctctt
ttatttatttatttatctatttatttatttattattttaaaaatatttta
ttaggtattttcctcatttacatttctaatgctatcccagaagtccccca
taccctcccccccccactcccctacccacccactcccactttttggccct
gtcgttcccctgtactgagggatataaagtttgcaagtccaatgggcctc
tctttccattgatggccgactaggccatcttttgatacatatgcagctag
agtcaagagttccggggttctggttagttcataatgttgttccacctata
gggttgcagatccctttagctccttgggtactttctctagctcctccatt
gggggccctgtgatccatccaatagctgcctgtgagcatccacttctgtg
tttgctaggccccggcatagtctcacaagagacagctatatctaggtcct
ttcagcaaaaatcttgttagtgtatgtaatggtgtcagcatttggaagct
gattatgggatggatccccagatatggcagtctctagatggtcatctttc
atcacagctcc
gaattctccttcgcctaggacgtgtcactccctgattggctgcagcccat
cggccgagttgacgtcacggggaaggcagagcacatggagtgaagaacca
ccctcggcacatgcgcagattatttgtttaccacttagaacacagctgtc
agcgccatcttgtaacggcgaatgtgggcgcggctcccaacactttctag
caggcattgactgcaaatagcctcttggttagctgtggggctttgtgtcc
acctcttctcagtgctggaactttgtgtggtatggacccatgcaggtctt
atgcaggctgccaccatctccatgagtttttatgggcatcagtcctatcg
tagctggaagacagtttccttggaatcatccatcacatccggctccttgt
gaccattctgcctcctcttccacatagatccctgagccttgaagggaaag
gtttggtgaagacatcccatgtaggaatgactgttccaaagtctctcaca
atgtccagggtctctaatgtccattgtctcataatattgtgggtctctgt
gttatttagcatccattgaaaaaagaccattttctgatgaaggctgaata
tgacattgatctataggcatagaaatatgttgttaggagtgacattctat
ggctatgtttctttagcagagtaatagcagtatgttttcccatagggtcc
ataatttctctagtctcaagttcttggacagtttaaccatatcaggtata
gattctatttcatctcatggagtaggttaggataaaaaccttctaaacaa
ttttctatttatatcagtcaataacaagtaaacgtaccctcctctcctaa
cctctaaccaacatgagcacaccacagcctaccctgtttcatctaaaagt
tcttggtattctctgagttagctctggaaactatgatataattaaagggt
tagtgagcaagttggatgatctcccacccaaatcatgagaggatttggtg
ataggaatccccctcgaaagagctcataataattgtctagtggaagtact
gtcctgtttagatcatcaaacagagctaagctgatcttggtgctggcaaa
gcctaggaatcaagaaatccaaggtcccgaggagaccagtgtagattgtg
ccatatccagatccatcctaaatctgatatcctcttgaaggcgtggggaa
c
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_162058246_162058766
seq2: B6Ng01-134J15.b_47_567 (reverse)

seq1  GGGAGTGGGGGGGGGAGGGTATGGGGGACTTCTGGGATAGCATTAGAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGTGGGGGGGGGAGGGTATGGGGGACTTCTGGGATAGCATTAGAAAT  50

seq1  GTAAATGAGGAAAATACCTAATAAAATATTTTTAAAATAATAAATAAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATGAGGAAAATACCTAATAAAATATTTTTAAAATAATAAATAAATA  100

seq1  AATAGATAAATAAATAAATAAAAGAGCATTTCACCCTGCACACCACCACG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGATAAATAAATAAATAAAAGAGCATTTCACCCTGCACACCACCACG  150

seq1  GGCCAGACCTAGCAGTGACAAGTGGTCCCATGAGACAACTGACCTTAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGACCTAGCAGTGACAAGTGGTCCCATGAGACAACTGACCTTAAGA  200

seq1  AGCACAGAGATGGGGCTATATCACTGTTGTCATCGTGGAACAATAAAGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAGAGATGGGGCTATATCACTGTTGTCATCGTGGAACAATAAAGGG  250

seq1  TCTAACTCCTGGGACACTTTAATGTCCAGGCCCCATCCTTGCTATTTTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAACTCCTGGGACACTTTAATGTCCAGGCCCCATCCTTGCTATTTTAC  300

seq1  CACGTCACAGACCTGCCTACCATAAAGGACACTTGAGATTACCAACTGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGTCACAGACCTGCCTACCATAAAGGACACTTGAGATTACCAACTGCT  350

seq1  CAACCTCATCCCTGAGGCCTTTGCACAGGTGACTTCCCCGTTAGCTCCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTCATCCCTGAGGCCTTTGCACAGGTGACTTCCCCGTTAGCTCCCA  400

seq1  CCTGTCCTTCCAGGCTCTCTTCAGGGGTCCCTTCTCAGATGCTTTCCTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCCTTCCAGGCTCTCTTCAGGGGTCCCTTCTCAGATGCTTTCCTCC  450

seq1  TCACATTGGTTTTGGTCAGTGTTTTATCACAGCAACAAAAGTGATGTGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATTGGTTTTGGTCAGTGTTTTATCACAGCAACAAAAGTGATGTGCA  500

seq1  CCCATTGCTTTAAGTGAATTC  521
      |||||||||||||||||||||
seq2  CCCATTGCTTTAAGTGAATTC  521

seq1: chr1_161907076_161907997
seq2: B6Ng01-134J15.g_354_1269

seq1  ACCCATGCAGGTCTTATGCAGGCTGCCACCATCTCCATGAGTTTTTATGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATGCAGGTCTTATGCAGGCTGCCACCATCTCCATGAGTTTTTATGG  50

seq1  GCATCAGTCCTATCGTAGCTGGAAGACAGTTTCCTTGGAATCATCCATCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCAGTCCTATCGTAGCTGGAAGACAGTTTCCTTGGAATCATCCATCA  100

seq1  CATCCGGCTCCTTGTGACCATTCTGCCTCCTCTTCCACATAGATCCCTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCGGCTCCTTGTGACCATTCTGCCTCCTCTTCCACATAGATCCCTGA  150

seq1  GCCTTGAAGGGAAAGGTTTGGTGAAGACATCCCATGTAGGAATGACTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGAAGGGAAAGGTTTGGTGAAGACATCCCATGTAGGAATGACTGTT  200

seq1  CCAAAGTCTCTCACAATGTCCAGGGTCTCTAATGTCCATTGTCTCATAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGTCTCTCACAATGTCCAGGGTCTCTAATGTCCATTGTCTCATAAT  250

seq1  ATTGTGGGTCTCTGTGTTATTTAGCATCCATTGAAAAAAGACCATTTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGGGTCTCTGTGTTATTTAGCATCCATTGAAAAAAGACCATTTTCT  300

seq1  GATGAAGGCTGAATATGACATTGATCTATAGGCATAGAAATATGTTGTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAAGGCTGAATATGACATTGATCTATAGGCATAGAAATATGTTGTTA  350

seq1  GGAGTGACATTCTATGGCTATGTTTCTTTAGCAGAGTAATAGCAGTATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTGACATTCTATGGCTATGTTTCTTTAGCAGAGTAATAGCAGTATGT  400

seq1  TTTCCCATAGGGTCCATAATTTCTCTAGTCTCAAGTTCTTGGACAGTTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCATAGGGTCCATAATTTCTCTAGTCTCAAGTTCTTGGACAGTTTA  450

seq1  ACCATATCAGGTATAGATTCTATTTCATCTCATGGAGTAGGTTAGGATAA  500
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  ACCATATCAGGTATAGATTCTATTTCATCTCATGGAGTAGGTTAGGAT-A  499

seq1  AAAACCTTCTAAACAATTTTCTATTTATATCAGTCAATAACAAGTAAACG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCTTCTAAACAATTTTCTATTTATATCAGTCAATAACAAGTAAACG  549

seq1  TACCCTCCTCTCCTAACCTCTAACCAACATGAGCACACCACAGCCTACCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCTCCTCTCCTAACCTCTAACCAACATGAGCACACCACAGCCTACCC  599

seq1  TGTTTCATCTAAAAGTTCTTGGTATTCTCTGAGTTAGCTCTGGAAACTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TGTTTCATCTAAAAGTTCTTGGTATTCTCTGAGTTAGCTCTGGAAAC-TA  648

seq1  TGATATAATTAAAGGGTTAGTGAGC-AGGTGGATGATCTCCCACCCAAAT  699
      ||||||||||||||||||||||||| || |||||||||||||||||||||
seq2  TGATATAATTAAAGGGTTAGTGAGCAAGTTGGATGATCTCCCACCCAAAT  698

seq1  CATGAGAGGATTTGGGTGATAGGAATTCTCCTCAGAAGAGCTCAT-ATAA  748
      ||||||||||||| |||||||||||| | ||||  |||||||||| ||||
seq2  CATGAGAGGATTT-GGTGATAGGAATCCCCCTCGAAAGAGCTCATAATAA  747

seq1  TTGTCTAGT-GAAGTACTGTCATGTTTAGAATCATC-AACAGAGCTAAGC  796
      ||||||||| ||||||||||| ||||||| |||||| |||||||||||||
seq2  TTGTCTAGTGGAAGTACTGTCCTGTTTAG-ATCATCAAACAGAGCTAAGC  796

seq1  TGATCTTGGTGCTGGCAAAAGCCTAGGATTCAGAGAATCAAAGGTCTCAG  846
      |||||||||||||||| ||||||||||| |||   |||| |||||| | |
seq2  TGATCTTGGTGCTGGC-AAAGCCTAGGAATCAAGAAATCCAAGGTC-CCG  844

seq1  AGGAGCAGAGTGTAGTTTGTGACAATACCCAGAACCCATCCTAGATCTGA  896
      |||||   ||||||| ||||| | ||| |||| | |||||||| ||||||
seq2  AGGAGACCAGTGTAGATTGTG-CCATATCCAG-ATCCATCCTAAATCTGA  892

seq1  TAATCACTCTGGAAGGCGTGGGGAAC  922
      | ||| |||| |||||||||||||||
seq2  T-ATC-CTCTTGAAGGCGTGGGGAAC  916