BAC Information

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BAC

Clone NameB6Ng01-135C16
Chromosome1 (Build37)
Map Location 164,494,326 - 164,615,756
singlet/doubletdoublet
Overlap geneVamp4, LOC435651, Myoc, Bat2d
Upstream geneEG435650, LOC100039623, LOC269134, Fasl, AI848100, EG665109, Pigc, Dnm3, LOC100039703, Dnm3os, 5630401D24Rik
Downstream geneFmo4, Fmo1, Fmo2, Fmo6, Fmo3, 4921528O07Rik, Prrx1, LOC100039597, Scyl1bp1, LOC665237
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-135C16.bB6Ng01-135C16.g
ACCDH935276DH935277
length1,1191,127
definitionDH935276|Mus musculus domesticus DNA, BAC clone: B6Ng01-135C16, 5' end.DH935277|Mus musculus domesticus DNA, BAC clone: B6Ng01-135C16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(164,614,615 - 164,615,756)(164,494,326 - 164,495,453)
sequence
gaattcatgccaggacagccagggctacacagagaaaccctgtctggaaa
aaacaaaaaaacaaaaacaaaaaaaaaaaaaacaaaacagaaattaacag
gcgatgatggtaatgggcagatctctgagtttgaggccagcttggtctac
agagtgagttccaggacagccaagactatacagagaaaccctatctttaa
cacacacacacaaaaaccactttaaaaaacaaatttagaaattggtattt
aaagggttaaacttgtttgttagtggtattaaagatgctacgtaggaaac
gcaccgccttacaaatcatcttaaagattatcttgggtttacctttcatc
acagtattttttctggtaatacaaagaacctttttgcctccatatgtggt
agaatcttgctctgctcttcaattcagaaatcactagacacataaaatta
ctcaacatttgaacaatgggtagtctaaattgaattgtgatctaaattga
agagaaaatgagagagatctacatctgaaattttaatattaaaaggggaa
attaagaaataggtggcatttgtgtaaatctcagggcttcagagatcagg
agtcaagtgttcaaagtcatctttcagtgcacagtgagtttaaggcctgg
ccatgctatgccacagtgaaacagtgaaagcaaataagaggaaacatggg
ttgttatatcaattactatttcagttataaatacattgtttcaaattatc
ttttaatcaatttaatattgcctttttgtttttagcttgtaaaacatagt
gggtagaaaaatttagtttcgtgtatgtggcaggcattattgttatctga
aagttagtaggcactgctgctccattttaaagatctcattctgtccttta
aaacatgaaaatccgtgtgaaccagggccacaatatatatgtccagacag
tacttgccctgtacatcaccatgtgcctttgaaagtgttgatttaaaaag
aaggaacaggacgtgttatataagctttctgacacaggcggatattagtc
tctccatgagaccattcttcttattacactggtgggagtaggcaatgttt
ttggatattgctttaacta
gaattcatttgggcttatagttccaaagagttaagagtccatgatggagg
agcaaaggcatggaagcagaagcagggagcagggggtggggcatgaggag
aggctaacacacttagtgttgtgttgctgtataagactgtatttggaaga
gaatgtaatagttcaccacttttatatcctcaaactttaatagaatacct
gtcacatatatttgaaagattagctgatccactttgacactacacctaaa
attagcattaccactttcagcaagaaagccatgtttgaccttcagcacac
taaaccctcctagatcaagtgggatcatctcaaggtactaaacttgaaag
agcgcttctatatgctttaagaataagctgggggtgagggggtatggctg
ccccattaacagtggatgggctgcaggaagtccacagctaccgccacagg
atcagactgaggttctgctggagcagctaaagataaaacagaagaatcaa
tggcagacaactgtgaggagaaaataagagaattctatgttggcctgcca
tttgacactattgatatggtgtcaaatcaaaggaaggctacaaaaagtta
gtcgaaaataagaccgagagtcaataaccaagagcttgctcatcagtttg
gaagaaacttggcacaggggacattttcagagaaattctaaacacttgta
ccaggtgcaccctctctgcatctccctagaagtaactagatagagtcaag
gctacaggctgaatgcagtagtacacagtgttgcctaactaacccctctg
aattggagcactgctcttagaaggagaggctcacaagattcgggaggcta
cagaatgctacaatgctacaagtcacaagattctcaagaccctaagctca
taaaagcagaactgctaagtctctctagtggagtcatctgctagttgggc
acaagccatgtagggggtggcttagggtgatgcactcttctgcttttggt
taccccacagtccaggagtacttccccccccatcaacttctttgttcacc
acaatagactgggggtggattttctcttggtctgctggcttggtggccta
gctggagaaaacggacattggtcacac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_164614615_164615756
seq2: B6Ng01-135C16.b_43_1161 (reverse)

seq1  TAGTTAAAGCACTTATCAAAAAACAAATGGCCCTACCTCCCACCAGTGTA  50
      |||||||||||  |||| ||||||  || | |||| ||||||||||||||
seq2  TAGTTAAAGCA-ATATCCAAAAAC--ATTG-CCTA-CTCCCACCAGTGTA  45

seq1  ATAAAGAAGAATGGGTCTTCCATGGGAGAGACTTAATATTCTGCCTGTTG  100
      || ||||||||| |||||  ||| |||||||| ||||| || ||||| ||
seq2  AT-AAGAAGAAT-GGTCT--CAT-GGAGAGAC-TAATA-TCCGCCTG-TG  87

seq1  TCAGAAAAGGCCTTATATAACACGGTCCCCTGTTCCTTCTTTTTAAATCA  150
      |||||||    |||||||||||||    ||||||||||||||||||||||
seq2  TCAGAAA---GCTTATATAACACG---TCCTGTTCCTTCTTTTTAAATCA  131

seq1  ACACTTTTCAAAGGCACATGGTGATGTAACAGGGCAAGTACTGTCTTGGA  200
      |||| |||||||||||||||||||||| ||||||||||||||||| ||||
seq2  ACAC-TTTCAAAGGCACATGGTGATGT-ACAGGGCAAGTACTGTC-TGGA  178

seq1  CATATATATTTGTGGCCCTGGTTCACACGGATTTTCATGTTTTAAAGGAC  250
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CATATATA-TTGTGGCCCTGGTTCACACGGATTTTCATGTTTTAAAGGAC  227

seq1  AGAATGAGATCTTTAAAATGGAGCAGCAGTGCCTACTAACTTTCAGATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGAGATCTTTAAAATGGAGCAGCAGTGCCTACTAACTTTCAGATAA  277

seq1  CAATAATGCCTGCCACATACACGAAACTAAATTTTTCTACCCACTATGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAATGCCTGCCACATACACGAAACTAAATTTTTCTACCCACTATGTT  327

seq1  TTACAAGCTAAAAACAAAAAGGCAATATTAAATTGATTAAAAGATAATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAGCTAAAAACAAAAAGGCAATATTAAATTGATTAAAAGATAATTT  377

seq1  GAAACAATGTATTTATAACTGAAATAGTAATTGATATAACAACCCATGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAATGTATTTATAACTGAAATAGTAATTGATATAACAACCCATGTT  427

seq1  TCCTCTTATTTGCTTTCACTGTTTCACTGTGGCATAGCATGGCCAGGCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTTATTTGCTTTCACTGTTTCACTGTGGCATAGCATGGCCAGGCCT  477

seq1  TAAACTCACTGTGCACTGAAAGATGACTTTGAACACTTGACTCCTGATCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTCACTGTGCACTGAAAGATGACTTTGAACACTTGACTCCTGATCT  527

seq1  CTGAAGCCCTGAGATTTACACAAATGCCACCTATTTCTTAATTTCCCCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGCCCTGAGATTTACACAAATGCCACCTATTTCTTAATTTCCCCTT  577

seq1  TTAATATTAAAATTTCAGATGTAGATCTCTCTCATTTTCTCTTCAATTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATATTAAAATTTCAGATGTAGATCTCTCTCATTTTCTCTTCAATTTA  627

seq1  GATCACAATTCAATTTAGACTACCCATTGTTCAAATGTTGAGTAATTTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCACAATTCAATTTAGACTACCCATTGTTCAAATGTTGAGTAATTTTA  677

seq1  TGTGTCTAGTGATTTCTGAATTGAAGAGCAGAGCAAGATTCTACCACATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCTAGTGATTTCTGAATTGAAGAGCAGAGCAAGATTCTACCACATA  727

seq1  TGGAGGCAAAAAGGTTCTTTGTATTACCAGAAAAAATACTGTGATGAAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGCAAAAAGGTTCTTTGTATTACCAGAAAAAATACTGTGATGAAAG  777

seq1  GTAAACCCAAGATAATCTTTAAGATGATTTGTAAGGCGGTGCGTTTCCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACCCAAGATAATCTTTAAGATGATTTGTAAGGCGGTGCGTTTCCTA  827

seq1  CGTAGCATCTTTAATACCACTAACAAACAAGTTTAACCCTTTAAATACCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAGCATCTTTAATACCACTAACAAACAAGTTTAACCCTTTAAATACCA  877

seq1  ATTTCTAAATTTGTTTTTTAAAGTGGTTTTTGTGTGTGTGTGTTAAAGAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTAAATTTGTTTTTTAAAGTGGTTTTTGTGTGTGTGTGTTAAAGAT  927

seq1  AGGGTTTCTCTGTATAGTCTTGGCTGTCCTGGAACTCACTCTGTAGACCA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTTCTCTGTATAGTCTTGGCTGTCCTGGAACTCACTCTGTAGACCA  977

seq1  AGCTGGCCTCAAACTCAGAGATCTGCCCATTACCATCATCGCCTGTTAAT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGCCTCAAACTCAGAGATCTGCCCATTACCATCATCGCCTGTTAAT  1027

seq1  TTCTGTTTTGTTTTTTTTTTTTTTGTTTTTGTTTTTTTGTTTTTTCCAGA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTTTGTTTTTTTTTTTTTTGTTTTTGTTTTTTTGTTTTTTCCAGA  1077

seq1  CAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGCATGAATTC  1142
      ||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGCATGAATTC  1119

seq1: chr1_164494326_164495453
seq2: B6Ng01-135C16.g_67_1193

seq1  GAATTCATTTGGGCTTATAGTTCCAAAGAGTTAAGAGTCCATGATGGAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTGGGCTTATAGTTCCAAAGAGTTAAGAGTCCATGATGGAGG  50

seq1  AGCAAAGGCATGGAAGCAGAAGCAGGGAGCAGGGGGTGGGGCATGAGGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAGGCATGGAAGCAGAAGCAGGGAGCAGGGGGTGGGGCATGAGGAG  100

seq1  AGGCTAACACACTTAGTGTTGTGTTGCTGTATAAGACTGTATTTGGAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTAACACACTTAGTGTTGTGTTGCTGTATAAGACTGTATTTGGAAGA  150

seq1  GAATGTAATAGTTCACCACTTTTATATCCTCAAACTTTAATAGAATACCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTAATAGTTCACCACTTTTATATCCTCAAACTTTAATAGAATACCT  200

seq1  GTCACATATATTTGAAAGATTAGCTGATCCACTTTGACACTACACCTAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACATATATTTGAAAGATTAGCTGATCCACTTTGACACTACACCTAAA  250

seq1  ATTAGCATTACCACTTTCAGCAAGAAAGCCATGTTTGACCTTCAGCACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGCATTACCACTTTCAGCAAGAAAGCCATGTTTGACCTTCAGCACAC  300

seq1  TAAACCCTCCTAGATCAAGTGGGATCATCTCAAGGTACTAAACTTGAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCCTCCTAGATCAAGTGGGATCATCTCAAGGTACTAAACTTGAAAG  350

seq1  AGCGCTTCTATATGCTTTAAGAATAAGCTGGGGGTGAGGGGGTATGGCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGCTTCTATATGCTTTAAGAATAAGCTGGGGGTGAGGGGGTATGGCTG  400

seq1  CCCCATTAACAGTGGATGGGCTGCAGGAAGTCCACAGCTACCGCCACAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATTAACAGTGGATGGGCTGCAGGAAGTCCACAGCTACCGCCACAGG  450

seq1  ATCAGACTGAGGTTCTGCTGGAGCAGCTAAAGATAAAACAGAAGAATCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGACTGAGGTTCTGCTGGAGCAGCTAAAGATAAAACAGAAGAATCAA  500

seq1  TGGCAGACAACTGTGAGGAGAAAATAAGAGAATTCTATGTTGGCCTGCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGACAACTGTGAGGAGAAAATAAGAGAATTCTATGTTGGCCTGCCA  550

seq1  TTTGACACTATTGATATGGTGTCAAATCAAAGGAAGGCTACAAAAAGTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACACTATTGATATGGTGTCAAATCAAAGGAAGGCTACAAAAAGTTA  600

seq1  GTCGAAAATAAGACCGAGAGTCAATAACCAAGAGCTTGCTCATCAGTTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGAAAATAAGACCGAGAGTCAATAACCAAGAGCTTGCTCATCAGTTTG  650

seq1  GAAGAAACTTGGCACAGGGGACATTTTCAGAGAAATTCTAAACACTTGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAACTTGGCACAGGGGACATTTTCAGAGAAATTCTAAACACTTGTA  700

seq1  CCAGGTGCACCCTCTCTGCATCTCCCTAGAAGTAACTAGATAGAGTCAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTGCACCCTCTCTGCATCTCCCTAGAAGTAACTAGATAGAGTCAAG  750

seq1  GCTACAGGCTGAATGCAGTAGTACACAGTGTTGCCTAACTAACCCCTCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACAGGCTGAATGCAGTAGTACACAGTGTTGCCTAACTAACCCCTCTG  800

seq1  AATTGGAGCACTGCTCTTAGAAGGAGAGGCTCACAAGATTCGGGAGGCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGAGCACTGCTCTTAGAAGGAGAGGCTCACAAGATTCGGGAGGCTA  850

seq1  CAGAATGCTACAATGCTACAAGTCACAAGATTCTCAAGACCCTAAGCTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATGCTACAATGCTACAAGTCACAAGATTCTCAAGACCCTAAGCTCA  900

seq1  TAAAAGCAGAACTGCTAAGTCTCTCTAGTGGAGTCATCTGCTAGTTGGGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGCAGAACTGCTAAGTCTCTCTAGTGGAGTCATCTGCTAGTTGGGC  950

seq1  AACAAGCCATGTAGGGGGTGGCTTAGGGTGATGCACTC-TCTGCTTTTGG  999
       ||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  -ACAAGCCATGTAGGGGGTGGCTTAGGGTGATGCACTCTTCTGCTTTTGG  999

seq1  GTCACCCACAGTCCAGGAAGTACTCCACACCCAATCAACTCTTTGGTTCA  1049
       |  ||||||||||||| |||||| | | ||| |||||||  || |||||
seq2  TTACCCCACAGTCCAGG-AGTACTTCCCCCCCCATCAACTTCTTTGTTCA  1048

seq1  CCACAATAGACTGGGGTGGAATTATTCTCTT-GTCTGCTG--CTGGTGCC  1096
      ||||||||||||||||  | ||| ||||||| ||||||||   ||||| |
seq2  CCACAATAGACTGGGGGTGGATT-TTCTCTTGGTCTGCTGGCTTGGTGGC  1097

seq1  CTAGCTGAGGAAAAACGGACATTTGTTCACAC  1128
      ||||||| |  |||||||||| ||| ||||||
seq2  CTAGCTG-GAGAAAACGGACA-TTGGTCACAC  1127