BAC Information

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BAC

Clone NameB6Ng01-135D22
Chromosome1 (Build37)
Map Location 148,875,374 - 148,876,540
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC383571, B830045N13Rik, LOC100043240
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-135D22.bB6Ng01-135D22.g
ACCDH935336DH935337
length1,1561,213
definitionDH935336|Mus musculus domesticus DNA, BAC clone: B6Ng01-135D22, 5' end.DH935337|Mus musculus domesticus DNA, BAC clone: B6Ng01-135D22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctattctaggaaacttgctagaaaaaaaataggccaaaaaaaaaa
tcccaacagaattactcctctccgaagtggataatcaaaataatttctgg
taatttataaccagatacactcactctttggtgagtttactaaatgtaaa
cagaacagtattttttggttatacataggtttgtgggaccctggaactag
gagggactggagcaaaagtggatttgaggaacttttatttagagatcaat
aggaagtgggcccacttcttctgtttccttgagcctgcaggcctgcatct
ttgctcacaccataggaagtcatttagttgtagcagcaaaagtaaacttc
ccctcttataaggtcaggttcagcaaacacctgaaactcctcgctatgca
aatgagacatcctcagcacttagaccctgaccagttctgtatatcaacca
tgataatccctcatcatcctcaaagatttaaaggaccttgtccctctcaa
ttaaataaggtgatctctgacgccagagaagtctgtttctttctcattgt
gctcactcaccatctgagattccctatactgcctgtttgttgaatttggc
agaaagttgatagagatcactaacactgccaatttttgtcattttcaata
ttgaaggcattacagtgagcatacagtataaacatatttgaaataaagag
aagctgatacaaaagaagaaaggaagttagaaggatagatggcaaaagga
aaggacagaatatgctctttctgttgtctccactcccaacatagattaaa
gacaactacatataaaatgataagcctctgtgtaagttgaaatactttgc
aaacaatctttcagaattgacatacttcaaataattgcagagattattat
cctagacacgttgtgagacatcatagagttgtaattttactgaaaggttc
ttaatgatgtcacatttcctgctgtttttaccacgataactggaagaagt
atttggatatacttcaacatactgaaacactaggaaaaataagtggcacc
ctcttttacacgattttagtagtaataatgttacaaagacttcatgggaa
aagaaaacatttatttctagcatactaaagagttttttttccttcgaaaa
gcatac
gaattcttacagaggttgagctcagctgtgaaaccagaccctgaaaccag
acagtcattcaccaaaatattggcattcgaaaatgcaaataccgaatatg
aaagaataatcaaaccattgaaagcacatggcgcttctatagatgaatgg
ataaggaaaacaatggatattggttatcagaaatataatgccaacatcgt
tgctagaaatatcaggaatcaaagtgttcaatgttgtaactgaggtgaac
ttgctcatttccaaggaaatagtaaagcaaaagattaataactcaaaatg
ataggtacaatgactctagagcatatggtaatcataggaaagagcaagca
ggttctggtcaccatgaaccccaaagacgtccagggtactgtagccactg
tggaaagggcaaacaatggacagcagacaattggtgtaagagagacatag
aggtgacctcttgctaccaggaaacgaaccaatgggcctgtcagctcaag
gccgtgcagcaaaccacatgagccatgttcctttggtcaggcagcaggta
ccgaacaatcaagaaaatcaatattaggtatttctgatcttatacctgct
acagaaggaagtgcagcttttgatctggctacagatccctttcttacttt
atccccaaaagtcgaatgttaaagttaaccactggcatatgtggtccctt
accttcagggacagtggggataatcttgtgaagaagtggatcaaattctc
aagggtttattgcgcatccaggtataatagatgggagtagcaaggaagaa
ataaaaattatggcatatgttaaaagggagatgcaaattgaggcagaaga
tagaatggctcaactgttgtttttttccttacatcaagggcgaggctgct
ccaatagaaaggacgggttcttttgggaaaattgtatattctaacgaata
atggtcaatggccagagacccaaattaatttacaaatgatggttgtgaca
tagaagtcttggtggattttcacaaagtcttggaatccgaattgaccacc
tcgaggttatacacctatttaaaggaattgtaattatcatgagccatgat
tgaggaaatctgtgtgaaagttacgaagacattggaagtacgaacctaat
tgcataatatctcgatgttatcagttcttgtgtgagagctgaaaaggctg
ctgtatgacgatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_148875374_148876540
seq2: B6Ng01-135D22.b_48_1203

seq1  GAATTCTATTCTAGGAAACTTGCTAGAAAAAAAATAGGCCAAAAAAAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATTCTAGGAAACTTGCTAGAAAAAAAATAGGCCAAAAAAAAAA  50

seq1  TCCCAACAGAATTACTCCTCTCCGAAGTGGATAATCAAAATAATTTCTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAACAGAATTACTCCTCTCCGAAGTGGATAATCAAAATAATTTCTGG  100

seq1  TAATTTATAACCAGATACACTCACTCTTTGGTGAGTTTACTAAATGTAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTATAACCAGATACACTCACTCTTTGGTGAGTTTACTAAATGTAAA  150

seq1  CAGAACAGTATTTTTTGGTTATACATAGGTTTGTGGGACCCTGGAACTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACAGTATTTTTTGGTTATACATAGGTTTGTGGGACCCTGGAACTAG  200

seq1  GAGGGACTGGAGCAAAAGTGGATTTGAGGAACTTTTATTTAGAGATCAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGACTGGAGCAAAAGTGGATTTGAGGAACTTTTATTTAGAGATCAAT  250

seq1  AGGAAGTGGGCCCACTTCTTCTGTTTCCTTGAGCCTGCAGGCCTGCATCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGTGGGCCCACTTCTTCTGTTTCCTTGAGCCTGCAGGCCTGCATCT  300

seq1  TTGCTCACACCATAGGAAGTCATTTAGTTGTAGCAGCAAAAGTAAACTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCACACCATAGGAAGTCATTTAGTTGTAGCAGCAAAAGTAAACTTC  350

seq1  CCCTCTTATAAGGTCAGGTTCAGCAAACACCTGAAACTCCTCGCTATGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTTATAAGGTCAGGTTCAGCAAACACCTGAAACTCCTCGCTATGCA  400

seq1  AATGAGACATCCTCAGCACTTAGACCCTGACCAGTTCTGTATATCAACCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGACATCCTCAGCACTTAGACCCTGACCAGTTCTGTATATCAACCA  450

seq1  TGATAATCCCTCATCATCCTCAAAGATTTAAAGGACCTTGTCCCTCTCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAATCCCTCATCATCCTCAAAGATTTAAAGGACCTTGTCCCTCTCAA  500

seq1  TTAAATAAGGTGATCTCTGACGCCAGAGAAGTCTGTTTCTTTCTCATTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATAAGGTGATCTCTGACGCCAGAGAAGTCTGTTTCTTTCTCATTGT  550

seq1  GCTCACTCACCATCTGAGATTCCCTATACTGCCTGTTTGTTGAATTTGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCACTCACCATCTGAGATTCCCTATACTGCCTGTTTGTTGAATTTGGC  600

seq1  AGAAAGTTGATAGAGATCACTAACACTGCCAATTTTTGTCATTTTCAATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGTTGATAGAGATCACTAACACTGCCAATTTTTGTCATTTTCAATA  650

seq1  TTGAAGGCATTACAGTGAGCATACAGTATAAACATATTTGAAATAAAGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGGCATTACAGTGAGCATACAGTATAAACATATTTGAAATAAAGAG  700

seq1  AAGCTGATACAAAAGAAGAAAGGAAGTTAGAAGGATAGATGGCAAAAGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGATACAAAAGAAGAAAGGAAGTTAGAAGGATAGATGGCAAAAGGA  750

seq1  AAGGACAGAATATGCTCTTTCTGTTGTCTCCACTCCCAACATAGATTAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACAGAATATGCTCTTTCTGTTGTCTCCACTCCCAACATAGATTAAA  800

seq1  GACAACTACATATAAAATGATAAGCCTCTGTGTAAGTTGAAATACTTTGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAACTACATATAAAATGATAAGCCTCTGTGTAAGTTGAAATACTTTGC  850

seq1  AAACAATCTTTCAGAATTGACATACTTCAAATAATTGCAGAGATTATTAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAATCTTTCAGAATTGACATACTTCAAATAATTGCAGAGATTATTAT  900

seq1  CCTAGACACGTTGTGAGACATCATAGAGTTGTAATTTTACTGAAAGGTTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGACACGTTGTGAGACATCATAGAGTTGTAATTTTACTGAAAGGTTC  950

seq1  TTAATGATGTCACATTTCCTGCTGTTTTAACCACGATAACTGGAAAGAAG  1000
      |||||||||||||||||||||||||||| |||||||||||||| ||||||
seq2  TTAATGATGTCACATTTCCTGCTGTTTTTACCACGATAACTGG-AAGAAG  999

seq1  TATTTGGATATACTCCAACATAACTGAAACACTAGGAAAAATAAGTGGCA  1050
      |||||||||||||| |||||| ||||||||||||||||||||||||||||
seq2  TATTTGGATATACTTCAACAT-ACTGAAACACTAGGAAAAATAAGTGGCA  1048

seq1  CCCTCTTTTTACACGATTTTAGTAGTAAATAATGTTACAAAGACTTCATT  1100
      ||||| |||||||||||||||||||| |||||||||||||||||||||| 
seq2  CCCTC-TTTTACACGATTTTAGTAGT-AATAATGTTACAAAGACTTCATG  1096

seq1  GGAGAAGAAAACATTTTATTTCTAGCATACTAAAAGAGTTTTTTTTTCCT  1150
      ||| ||||||||| ||||||||||||||||| |||||| |||||||||||
seq2  GGAAAAGAAAACA-TTTATTTCTAGCATACT-AAAGAG-TTTTTTTTCCT  1143

seq1  TCAGAAAATAGGCATAC  1167
      || |||||   ||||||
seq2  TC-GAAAA---GCATAC  1156