BAC Information

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BAC

Clone NameB6Ng01-136C21
Chromosome1 (Build37)
Map Location 149,600,874 - 149,716,970
singlet/doubletdoublet
Overlap genenone
Upstream geneB830045N13Rik
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-136C21.bB6Ng01-136C21.g
ACCDH936023DH936024
length8041,058
definitionDH936023|Mus musculus domesticus DNA, BAC clone: B6Ng01-136C21, 5' end.DH936024|Mus musculus domesticus DNA, BAC clone: B6Ng01-136C21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(149,716,168 - 149,716,970)(149,600,874 - 149,601,927)
sequence
gaattcacagagatccacttgcttctgtctcctgtgtacttgaattaaag
gcatgcaataccaagcctagctgagacagtgaatcttaaacagaacaatc
agcagtgtatgcaaggttttagaaggtggaagagaaaggaaagtgttatg
cattgttatcattatttcaaaagataaaacaattaattaaaaaataaaat
ttgctgaggagttcacaaagtttctgtggatcctctcaatatgtatatat
attatcactatagtaaatatatattatatatattatcactatctatctat
atctacatctatatctatatacatatctattatatatatatatatatata
tatatatatatatatatagagagagagagagagagagagagaggaatgta
ttaaacttaaatttccaaataacttttatttttcatgaaaaaaaaaacaa
aaaacagtattcagtatttgtcatttaagcaaaaataaaaagaaaaaaat
gtagtcagaaatgactggaaatcataaggaaatgcaagatattcaaaata
gatgtcaacactgtaattataaatcacagaccaaagcaaacctagatgac
ataaaatctgcattaaaagacaaaatgaaaaaggtgctaggaaagtagtt
attaaaaaacatctacagataagttttcaaaactacatttaacaagtaaa
taaatatgcttaggcagcatgttaaaaaaaaaaaaactttagtagaatta
agtattttgaaaggtaatccaataacaactcatgagatcacatcaaatgg
aaat
gaattcagatgttaataaatgaaaatatctttggctgttagtgtgcaaaa
ctggaaaaccaaaactctgatcatttagatgagactcaatatcaaattga
gacatatctcggtgttagtgtacgttctcaacatacaaggatacctgagt
ttcatctacaacactggagagaacaaaagttcatttgaagatcaacaaaa
gacaaagagctaagctagtgatgttctccataagataatgtgcaaaaaac
tccaacatgcatattggcagctgatataactcctgggaggtagaaggcca
gtagattaccacccagccattcacaacctgggttcaatgtctggagatgc
tggagatgatagcccagcctttcacctcttgtgatgaccaactcagaggg
gcatcattctttcatcttggctgtttttcaccatgctatgtaagaattac
ctccactgtttcaacagcaaagtagcagtcctatccaagactgaacttca
aacaggagcatcctgatgaatctgagagagaaatctggattatccaagaa
caaataaaaaaatatagactttaacagagttactgtttgtttactgtatg
ggtgtgtgatggttagtagcccaattgaattttatgtatggtttaaatct
atagtttgttttattgtattgttatctccttatgttttgacttttaaaat
ctacattttagtatagtttccctacaaattgacttttcataaatacttaa
gatattgttcattgactttaagactctatgttttaacctttatcttagaa
ctttatcattagtctcaatttttctactcctacaagtaattttctctaca
tttttatacctatatggagtatatattatttttccacacctccactctat
agccatatttgtacagtatatttttctctgcttattcaaatccttcctaa
tttcactgcatacatcttgatacctgtgctgtataaaaatatctacaaat
ccacccaccttcttcaactagttctctagtgctctatggttcccaagtgt
aaaacaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_149716168_149716970
seq2: B6Ng01-136C21.b_50_853 (reverse)

seq1  ATTTCCATTTTGATGTGTTCTCATGAGTTGTTATTGGATTACCTTTC-AA  49
      ||||||| ||||||||| ||||||||||||||||||||||||||||| ||
seq2  ATTTCCA-TTTGATGTGATCTCATGAGTTGTTATTGGATTACCTTTCAAA  49

seq1  ATACTTAATTCTACTAAAGTTTTTTTTTTTTTAACATGCTGCCTAAGCAT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTAATTCTACTAAAGTTTTTTTTTTTTTAACATGCTGCCTAAGCAT  99

seq1  ATTTATTTACTTGTTAAATGTAGTTTTGAAAACTTATCTGTAGATG-TTT  148
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ATTTATTTACTTGTTAAATGTAGTTTTGAAAACTTATCTGTAGATGTTTT  149

seq1  TTAATAACTACTTTCCTAGCACCTTTTTCATTTTGTCTTTTAATGCAGAT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAACTACTTTCCTAGCACCTTTTTCATTTTGTCTTTTAATGCAGAT  199

seq1  TTTATGTCATCTAGGTTTGCTTTGGTCTGTGATTTATAATTACAGTGTTG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGTCATCTAGGTTTGCTTTGGTCTGTGATTTATAATTACAGTGTTG  249

seq1  ACATCTATTTTGAATATCTTGCATTTCCTTATGATTTCCAGTCATTTCTG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTATTTTGAATATCTTGCATTTCCTTATGATTTCCAGTCATTTCTG  299

seq1  ACTACATTTTTTTCTTTTTATTTTTGCTTAAATGACAAATACTGAATACT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACATTTTTTTCTTTTTATTTTTGCTTAAATGACAAATACTGAATACT  349

seq1  GTTTTTTGTTTTTTTTTTCATGAAAAATAAAAGTTATTTGGAAATTTAAG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTGTTTTTTTTTTCATGAAAAATAAAAGTTATTTGGAAATTTAAG  399

seq1  TTTAATACATTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATAT  448
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TTTAATACATTCCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATAT  449

seq1  ATATATATATATATATATATATATAATAGATATGTATATAGATATAGATG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATATATATATAATAGATATGTATATAGATATAGATG  499

seq1  TAGATATAGATAGATAGTGATAATATATATAATATATATTTACTATAGTG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATATAGATAGATAGTGATAATATATATAATATATATTTACTATAGTG  549

seq1  ATAATATATATACATATTGAGAGGATCCACAGAAACTTTGTGAACTCCTC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATATATATACATATTGAGAGGATCCACAGAAACTTTGTGAACTCCTC  599

seq1  AGCAAATTTTATTTTTTAATTAATTGTTTTATCTTTTGAAATAATGATAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAATTTTATTTTTTAATTAATTGTTTTATCTTTTGAAATAATGATAA  649

seq1  CAATGCATAACACTTTCCTTTCTCTTCCACCTTCTAAAACCTTGCATACA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGCATAACACTTTCCTTTCTCTTCCACCTTCTAAAACCTTGCATACA  699

seq1  CTGCTGATTGTTCTGTTTAAGATTCACTGTCTCAGCTAGGCTTGGTATTG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGATTGTTCTGTTTAAGATTCACTGTCTCAGCTAGGCTTGGTATTG  749

seq1  CATGCCTTTAATTCAAGTACACAGGAGACAGAAGCAAGTGGATCTCTGTG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCTTTAATTCAAGTACACAGGAGACAGAAGCAAGTGGATCTCTGTG  799

seq1  AATTC  803
      |||||
seq2  AATTC  804

seq1: chr1_149600874_149601927
seq2: B6Ng01-136C21.g_64_1121

seq1  GAATTCAGATGTTAATAAATGAAAATATCTTTGGCTGTTAGTGTGCAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGATGTTAATAAATGAAAATATCTTTGGCTGTTAGTGTGCAAAA  50

seq1  CTGGAAAACCAAAACTCTGATCATTTAGATGAGACTCAATATCAAATTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAAACCAAAACTCTGATCATTTAGATGAGACTCAATATCAAATTGA  100

seq1  GACATATCTCGGTGTTAGTGTACGTTCTCAACATACAAGGATACCTGAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATATCTCGGTGTTAGTGTACGTTCTCAACATACAAGGATACCTGAGT  150

seq1  TTCATCTACAACACTGGAGAGAACAAAAGTTCATTTGAAGATCAACAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCTACAACACTGGAGAGAACAAAAGTTCATTTGAAGATCAACAAAA  200

seq1  GACAAAGAGCTAAGCTAGTGATGTTCTCCATAAGATAATGTGCAAAAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAGAGCTAAGCTAGTGATGTTCTCCATAAGATAATGTGCAAAAAAC  250

seq1  TCCAACATGCATATTGGCAGCTGATATAACTCCTGGGAGGTAGAAGGCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACATGCATATTGGCAGCTGATATAACTCCTGGGAGGTAGAAGGCCA  300

seq1  GTAGATTACCACCCAGCCATTCACAACCTGGGTTCAATGTCTGGAGATGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGATTACCACCCAGCCATTCACAACCTGGGTTCAATGTCTGGAGATGC  350

seq1  TGGAGATGATAGCCCAGCCTTTCACCTCTTGTGATGACCAACTCAGAGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGATGATAGCCCAGCCTTTCACCTCTTGTGATGACCAACTCAGAGGG  400

seq1  GCATCATTCTTTCATCTTGGCTGTTTTTCACCATGCTATGTAAGAATTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCATTCTTTCATCTTGGCTGTTTTTCACCATGCTATGTAAGAATTAC  450

seq1  CTCCACTGTTTCAACAGCAAAGTAGCAGTCCTATCCAAGACTGAACTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACTGTTTCAACAGCAAAGTAGCAGTCCTATCCAAGACTGAACTTCA  500

seq1  AACAGGAGCATCCTGATGAATCTGAGAGAGAAATCTGGATTATCCAAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGAGCATCCTGATGAATCTGAGAGAGAAATCTGGATTATCCAAGAA  550

seq1  CAAATAAAAAAATATAGACTTTAACAGAGTTACTGTTTGTTTACTGTATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAAAAAAATATAGACTTTAACAGAGTTACTGTTTGTTTACTGTATG  600

seq1  GGTGTGTGATGGTTAGTAGCCCAATTGAATTTTATGTATGGTTTAAATCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGTGATGGTTAGTAGCCCAATTGAATTTTATGTATGGTTTAAATCT  650

seq1  ATAGTTTGTTTTATTGTATTGTTATCTCCTTATGTTTTGACTTTTAAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTTGTTTTATTGTATTGTTATCTCCTTATGTTTTGACTTTTAAAAT  700

seq1  CTACATTTTAGTATAGTTTCCCTACAAATTGACTTTTCATAAATACTTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATTTTAGTATAGTTTCCCTACAAATTGACTTTTCATAAATACTTAA  750

seq1  GATATTGTTCATTGACTTTAAGACTCTATGTTTTAACCTTTATCTTAGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTGTTCATTGACTTTAAGACTCTATGTTTTAACCTTTATCTTAGAA  800

seq1  CTTTATCATTAGTCTCAATTTTTCTACTCCTACAAGTAATTTTCTCTACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATCATTAGTCTCAATTTTTCTACTCCTACAAGTAATTTTCTCTACA  850

seq1  TTTTTATACCTATATGGAGTATATATTA-TTTTCCACACCTCCACTCTAT  899
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TTTTTATACCTATATGGAGTATATATTATTTTTCCACACCTCCACTCTAT  900

seq1  AGCCATATTTGTACAGTATATTTTTCTCTGCTTATTCAAATCCTTCCTAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATATTTGTACAGTATATTTTTCTCTGCTTATTCAAATCCTTCCTAA  950

seq1  TTTCACTGCATACATCTTGATACCTGTGCTGTAT-AAAATATCTACAAAT  998
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TTTCACTGCATACATCTTGATACCTGTGCTGTATAAAAATATCTACAAAT  1000

seq1  -CACCCACCTTCTTCAACTAGTTCTCTAGTGCTCTATGG-TCCCAAGTGT  1046
       |||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CCACCCACCTTCTTCAACTAGTTCTCTAGTGCTCTATGGTTCCCAAGTGT  1050

seq1  AAAACAAA  1054
      ||||||||
seq2  AAAACAAA  1058