BAC Information

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BAC

Clone NameB6Ng01-136E12
Chromosome1 (Build37)
Map Location 147,748,325 - 147,932,036
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC667877, LOC625057, LOC383570
Downstream geneLOC383571, B830045N13Rik, LOC100043240
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-136E12.bB6Ng01-136E12.g
ACCDH936096DH936097
length1,104905
definitionDH936096|Mus musculus domesticus DNA, BAC clone: B6Ng01-136E12, 5' end.DH936097|Mus musculus domesticus DNA, BAC clone: B6Ng01-136E12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(147,930,907 - 147,932,036)(147,748,325 - 147,749,223)
sequence
gaattctcaactgaggaatactgaatgcctgagaagcacctgaaaaaatg
ttcatcatcttcaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggttaagatcaaaaactcaggtgacagc
agatgctggcaaggacatggagaaagaggaacactccttcattgctggta
ggattgcaagaaagctttttctaaggctaacccaacatagcagacaaccc
tgattctcctgagggttctctacttgtgacataccaaatttttataccaa
tgctatgcctttgtgttttacttttcctaattctccttatgtggcaactc
agaatttttgtatagttgaaggtcagtaagtgtatcaggtggaataatgt
gatctaattccatatccagggactcatttggtcattggaaatattcagga
ttttgtctgggagattagcagagtttttctacattcttctgtagaggttt
gtgtgtctctgggatatggtgatttaggcttgctgacagcatgatggaat
cagcatatttatagttctcatgttgttgcctgtttctaggtctacagcag
cagcatacatgggcatagacccagaagtctcagttaatgcagaacaaaga
ccatatggattggaaggggcacagttgaagtgttacaaatatgtgaatac
cagtaactctttctggatagtaatttcttttttttcttaataatttaatt
ttttaattagttattttcttcatttacatttcaaatgctatcccaaaagt
cccccagaacttcccccccactcccctacccacccactcccacttactgg
acctgaagatttgctgaaaggaccctgatatagctgtctctgtgaggtat
gctggggcctggcaacacagaagtgatgcttacagtcagctatggatgga
acacagatccccatggaggagctagagaaagcaccccaaactcagtctct
agctgctaatgttcaaaagatggctagtggcatcatgggaggaaggctct
ttgtcttgcaacttatatgctcatatggatggaatttttataaagctact
catt
gaattctctgcttagctctgtaacccagttttaaattgggttatttgttt
tggtttggtttggtttggtttttttggagtctaaacttcttgagttcttt
atatattttggattttagtcctctattacctattgactcttgatcattga
taagactgcattcatggaatcagaggtcaaatttaatgtttccacgagtg
aaggaacaacagccagtgtgacactccttatttcaagaaacataatttac
aaaagaatattttataatattttaacttctgaagttatgtgtctaagttc
ttttttcatactattggtgagtatttttcatactgttgattaatattatt
catcaatgaaaaatatcacataaatatttgactttatggatagaacacag
aaaatgtaagaatgactcagaaagaagtgaattttcatatttgaagtatt
gtatataatatgcgctcaatgaggcaggactataaaatgtttttctgttg
ccctcacagtacatttgaatatacagggaagaatatttaacttctgtgga
ctaattatgtttagttgccttatgattttttttttcaagtagaataagag
cagcaatataaccacacatgacatggacaagccaaagttttctgtccaca
cttatcacccagtgttgacttaggcttctctccatactttttttatgtgc
tggtttacatctgtatcccaggactcagggatcaaaggatttgtctaata
acatttctgggccatcaggggatgttttgagaataaatacctcaccccta
tataacttgtagaatctttgaaaagaaaataatatattttgaaggggttt
tgtatttgttatatatgttccatccttcaggagttaattttgtcataact
ttgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_147930907_147932036
seq2: B6Ng01-136E12.b_47_1150 (reverse)

seq1  AATGAGTAGCCTATTATAAGAAATTACTATCCATACTGAGGCATATAAAG  50
      ||||||||||   |||||| ||||| | ||||||| ||| ||||||||  
seq2  AATGAGTAGC--TTTATAA-AAATT-CCATCCATA-TGA-GCATATAA--  42

seq1  TTTGCAAGACCAAGGGGCCTCTCTTCCCAATGATGGCCAACTAGGCCATC  100
       |||||||| ||| | |||| || |||| ||||||  | |||| ||||||
seq2  GTTGCAAGA-CAAAGAGCCT-TCCTCCC-ATGATG--CCACTA-GCCATC  86

seq1  TTCTGATACATATGCAGCTAGAGACATGAGTTCTGGGGGTGCTTTCTCTA  150
      || ||| ||||  |||||||||||| |||||  | |||||||||||||||
seq2  TTTTGA-ACATTAGCAGCTAGAGAC-TGAGT--TTGGGGTGCTTTCTCTA  132

seq1  GCTCCTCCATTGGGGGATCTGTGTTCCATCCAATAGCTGACTGTGAGCAT  200
      ||||||||||  ||||||||||||||||||| |||||||||||| |||||
seq2  GCTCCTCCAT--GGGGATCTGTGTTCCATCC-ATAGCTGACTGTAAGCAT  179

seq1  CCACTTCTGTGTTTGCCAGGCCCCAGCATAGCCTCACAAGAGACAGCTAT  250
       |||||||||| |||||||||||||||||| |||||| ||||||||||||
seq2  -CACTTCTGTG-TTGCCAGGCCCCAGCATA-CCTCAC-AGAGACAGCTAT  225

seq1  ATCAGGGTCCTTTCAGCAAAATCTTCAGGTCCAGTAAGTGGGAGTGGGTG  300
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  ATCAGGGTCCTTTCAGC-AAATCTTCAGGTCCAGTAAGTGGGAGTGGGTG  274

seq1  GGTAGGGGAGTGGGGGGGAAGTTCTGGGGGACTTTTGGGATAGCATTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGGGGAGTGGGGGGGAAGTTCTGGGGGACTTTTGGGATAGCATTTGA  324

seq1  AATGTAAATGAAGAAAATAACTAATTAAAAAATTAAATTATTAAGAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAAATGAAGAAAATAACTAATTAAAAAATTAAATTATTAAGAAAAA  374

seq1  AAAGAAATTACTATCCAGAAAGAGTTACTGGTATTCACATATTTGTAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAATTACTATCCAGAAAGAGTTACTGGTATTCACATATTTGTAACA  424

seq1  CTTCAACTGTGCCCCTTCCAATCCATATGGTCTTTGTTCTGCATTAACTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAACTGTGCCCCTTCCAATCCATATGGTCTTTGTTCTGCATTAACTG  474

seq1  AGACTTCTGGGTCTATGCCCATGTATGCTGCTGCTGTAGACCTAGAAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTCTGGGTCTATGCCCATGTATGCTGCTGCTGTAGACCTAGAAACA  524

seq1  GGCAACAACATGAGAACTATAAATATGCTGATTCCATCATGCTGTCAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAACAACATGAGAACTATAAATATGCTGATTCCATCATGCTGTCAGCA  574

seq1  AGCCTAAATCACCATATCCCAGAGACACACAAACCTCTACAGAAGAATGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTAAATCACCATATCCCAGAGACACACAAACCTCTACAGAAGAATGT  624

seq1  AGAAAAACTCTGCTAATCTCCCAGACAAAATCCTGAATATTTCCAATGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAACTCTGCTAATCTCCCAGACAAAATCCTGAATATTTCCAATGAC  674

seq1  CAAATGAGTCCCTGGATATGGAATTAGATCACATTATTCCACCTGATACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGAGTCCCTGGATATGGAATTAGATCACATTATTCCACCTGATACA  724

seq1  CTTACTGACCTTCAACTATACAAAAATTCTGAGTTGCCACATAAGGAGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTGACCTTCAACTATACAAAAATTCTGAGTTGCCACATAAGGAGAA  774

seq1  TTAGGAAAAGTAAAACACAAAGGCATAGCATTGGTATAAAAATTTGGTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGAAAAGTAAAACACAAAGGCATAGCATTGGTATAAAAATTTGGTAT  824

seq1  GTCACAAGTAGAGAACCCTCAGGAGAATCAGGGTTGTCTGCTATGTTGGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACAAGTAGAGAACCCTCAGGAGAATCAGGGTTGTCTGCTATGTTGGG  874

seq1  TTAGCCTTAGAAAAAGCTTTCTTGCAATCCTACCAGCAATGAAGGAGTGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCCTTAGAAAAAGCTTTCTTGCAATCCTACCAGCAATGAAGGAGTGT  924

seq1  TCCTCTTTCTCCATGTCCTTGCCAGCATCTGCTGTCACCTGAGTTTTTGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTTTCTCCATGTCCTTGCCAGCATCTGCTGTCACCTGAGTTTTTGA  974

seq1  TCTTAACCATTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAACCATTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATT  1024

seq1  TGCATTTCCCTGATGATTGAAGATGATGAACATTTTTTCAGGTGCTTCTC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTTCCCTGATGATTGAAGATGATGAACATTTTTTCAGGTGCTTCTC  1074

seq1  AGGCATTCAGTATTCCTCAGTTGAGAATTC  1130
      ||||||||||||||||||||||||||||||
seq2  AGGCATTCAGTATTCCTCAGTTGAGAATTC  1104

seq1: chr1_147748325_147749223
seq2: B6Ng01-136E12.g_70_974

seq1  GAATTCTCTGCTTAGCTCTGTAACCCAGTTTTAAATTGGGTTATTTGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGCTTAGCTCTGTAACCCAGTTTTAAATTGGGTTATTTGTTT  50

seq1  TGGTTTGGTTTGGTTTGGTTTTTTTGGAGTCTAAACTTCTTGAGTTCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTGGTTTGGTTTGGTTTTTTTGGAGTCTAAACTTCTTGAGTTCTTT  100

seq1  ATATATTTTGGATTTTAGTCCTCTATTACCTATTGACTCTTGATCATTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTTTGGATTTTAGTCCTCTATTACCTATTGACTCTTGATCATTGA  150

seq1  TAAGACTGCATTCATGGAATCAGAGGTCAAATTTAATGTTTCCACGAGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACTGCATTCATGGAATCAGAGGTCAAATTTAATGTTTCCACGAGTG  200

seq1  AAGGAACAACAGCCAGTGTGACACTCCTTATTTCAAGAAACATAATTTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAACAACAGCCAGTGTGACACTCCTTATTTCAAGAAACATAATTTAC  250

seq1  AAAAGAATATTTTATAATATTTTAACTTCTGAAGTTATGTGTCTAAGTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAATATTTTATAATATTTTAACTTCTGAAGTTATGTGTCTAAGTTC  300

seq1  TTTTTTCATACTATTGGTGAGTATTTTTCATACTGTTGATTAATATTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCATACTATTGGTGAGTATTTTTCATACTGTTGATTAATATTATT  350

seq1  CATCAATGAAAAATATCACATAAATATTTGACTTTATGGATAGAACACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAATGAAAAATATCACATAAATATTTGACTTTATGGATAGAACACAG  400

seq1  AAAATGTAAGAATGACTCAGAAAGAAGTGAATTTTCATATTTGAAGTATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTAAGAATGACTCAGAAAGAAGTGAATTTTCATATTTGAAGTATT  450

seq1  GTATATAATATGCGCTCAATGAGGCAGGACTATAAAATGTTTTTCTGTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATAATATGCGCTCAATGAGGCAGGACTATAAAATGTTTTTCTGTTG  500

seq1  CCCTCACAGTACATTTGAATATACAGGGAAGAATATTTAACTTCTGTGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCACAGTACATTTGAATATACAGGGAAGAATATTTAACTTCTGTGGA  550

seq1  CTAATTATGTTTAGTTGCCTTATGATTTTTTTTTTCAAGTAGAATAAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTATGTTTAGTTGCCTTATGATTTTTTTTTTCAAGTAGAATAAGAG  600

seq1  CAGCAATATAACCACACATGACATGGACAAGCCAAAGTTTTCTGTCCACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAATATAACCACACATGACATGGACAAGCCAAAGTTTTCTGTCCACA  650

seq1  CTTATCACCCAGTGTTGACTTAGGCTTCTCTCCATAC-TTTTTTATGTGC  699
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CTTATCACCCAGTGTTGACTTAGGCTTCTCTCCATACTTTTTTTATGTGC  700

seq1  TGGTTTACATCTGTATCCCAGGACTCAGGGATCAAAGGATTTGTCTAATA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTACATCTGTATCCCAGGACTCAGGGATCAAAGGATTTGTCTAATA  750

seq1  ACA-TTCTGGGCCATCA-GGGATG-TTTGAGAATAAAATACCTCACCCCT  796
      ||| ||||||||||||| |||||| ||||||||| |||||||||||||||
seq2  ACATTTCTGGGCCATCAGGGGATGTTTTGAGAAT-AAATACCTCACCCCT  799

seq1  ATATAAC-TGTAGAATCTTTGAAAAG-AAATAATATATTTTGAAGGGGTT  844
      ||||||| |||||||||||||||||| |||||||||||||||||||||||
seq2  ATATAACTTGTAGAATCTTTGAAAAGAAAATAATATATTTTGAAGGGGTT  849

seq1  TTGTATTTGTTATATATGTTCCAT-CTTCATGAGTT-ATTTTGTCAATAA  892
      |||||||||||||||||||||||| ||||| ||||| |||||||| ||||
seq2  TTGTATTTGTTATATATGTTCCATCCTTCAGGAGTTAATTTTGTC-ATAA  898

seq1  CTTTGTG  899
      |||||||
seq2  CTTTGTG  905