BAC Information

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BAC

Clone NameB6Ng01-137B12
Chromosome1 (Build37)
Map Location 29,507,514 - 29,508,635
singlet/doubletsinglet
Overlap genenone
Upstream geneEG665903, Gm597, LOC435614, EG623924
Downstream geneEG433283, LOC100040665, LOC665944
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137B12.bB6Ng01-137B12.g
ACCDH936699DH936700
length1,1121,255
definitionDH936699|Mus musculus domesticus DNA, BAC clone: B6Ng01-137B12, 5' end.DH936700|Mus musculus domesticus DNA, BAC clone: B6Ng01-137B12, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttgaagatgagaatgtacacaataaggggatatggtagattct
tcctgtgtgacttactttccaataatatgatgttacctaaccaaaattat
gcaacattttatgatcacttgtattacatacttatagccacgggcctatg
aggaatttgagtacatatttctgatacatattacagcaaaggtgtttgca
ataaacacagcttttagtatatcccaattcaaaaaaatgatttcttagct
cactctaataaattcttaaatatataaagctgtttgagtttttataggca
catctaattttcttttataatctaaagcttaagttggaaaaggttcttct
aataaaacacctgatatagtgcagatttataaattattttgtaaaatgtt
tagaaatttaagtcctagtgctttctttaagagataattaaaaaaacagg
aaatataaattagggaaattcctctattatattggaccctatgccttttt
gtggttattaaggattttcttggttgaagtggttgggcccagatccctgt
ggccagttccattgctaggatggtagttctggatttgtattatgaaaaag
caacctgagggatccatcaaaaagcaaggcagcatcatgtactgtcttta
ggtgcctgcttaagttcctgccctgatgaacatctatgataaactaattt
gtaagccaaataaacccatttctactgaaagtggctttggccgttatctt
agttagagctacaattgctataataaaagatcatgaaccaaacatagtcg
ggaaggaactgttttaaagagctgttaaaaaatatttaattctgttctct
gagcaacatatgacttgcttccttccaatatagtagggtatggcatgtgg
cgttcctcaaggtccaacttattgtctcagatattttatttatgttttaa
tatgacacaggtgaaagcttaatttgatacattctgatttgctggctaca
tgctagctcttatctatgacataaggatatgcttaccaaagacagtgtag
atattgactttgtaaaagatattcatcagttgcatatttacattttaggg
aagactaaatat
gaattcttgacggcgagatactagctcgggcaagacaagagagagagagg
agagggaaagcagccccttttatagtgagttatgcacatctgactgttgc
gaggtaaatgttgggtaccaagagcaagtaccaagaaacattatggaaag
ggcgttaggggaaaaatattgaagagtaggcagataaggaattaaggcat
taaatgttccctggaggagttatgccagtactattcctttactctctgga
gctgtacttatttctgcatatgctgcacggatgagccagtaatcattgaa
tcatagaagagaaggaggccaatagagcttgtcctaatggagtggaccta
acagcagtagtggactcctggagaagtctttgttgaggaagttacccgtg
agttactatgtgcagtggatagttccgcataatggcccaatttagttgcc
atgattgaacccagtgcatcacggagcaaaagaaaattaagagaaaaagt
aatgaaatacaaagggtgcttgaaaatgggaggatggtgatgatgaaaga
caagggattagggtaatcagaatgtattatgcacatctatgatattgtca
aagaagaatgaatttatgaaattcttagtcaaatgggtggatctggagga
tatcatcctgagtgaggtaacccaatcacaaaagaacacacatgatatga
actcactgataagtggatattagcctagaaacttataatacccaagataa
aatttgcaaaacacatgacaatcaagaagaaggaagacaaaagtgtggac
acttgttccttcttagaatggggaacagaataccatggaaaggagttaca
gagacaaagttcagagctgagagagaaggaaggaccacccagaaactgcc
ctactcagggattcatcccataatcaacctccaacccagacactattgca
tatgctagcaaggtttgctgacaggaccctgaataaagctattctcttgt
gaggctatggccagtgcctgccaaatacagaagccagatgctcacagtca
cctatggatggaccagggtccccaaggtagagactgagaaagtatcaaga
gctaagggttctgcatctctaggagaacacatattgaaataccagattcc
acaccccacaagtgctatcttagtacagtagaggactggtctgggaatta
ttgcctatctacgggtatggcacgaggcgatgcatgtcttggtgagtggt
gcgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_29507514_29508635
seq2: B6Ng01-137B12.b_50_1161

seq1  GAATTCCTTGAAGATGAGAATGTACACAATAAGGGGATATGGTAGATTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGAAGATGAGAATGTACACAATAAGGGGATATGGTAGATTCT  50

seq1  TCCTGTGTGACTTACTTTCCAATAATATGATGTTACCTAACCAAAATTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTGTGACTTACTTTCCAATAATATGATGTTACCTAACCAAAATTAT  100

seq1  GCAACATTTTATGATCACTTGTATTACATACTTATAGCCACGGGCCTATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACATTTTATGATCACTTGTATTACATACTTATAGCCACGGGCCTATG  150

seq1  AGGAATTTGAGTACATATTTCTGATACATATTACAGCAAAGGTGTTTGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATTTGAGTACATATTTCTGATACATATTACAGCAAAGGTGTTTGCA  200

seq1  ATAAACACAGCTTTTAGTATATCCCAATTCAAAAAAATGATTTCTTAGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACACAGCTTTTAGTATATCCCAATTCAAAAAAATGATTTCTTAGCT  250

seq1  CACTCTAATAAATTCTTAAATATATAAAGCTGTTTGAGTTTTTATAGGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTAATAAATTCTTAAATATATAAAGCTGTTTGAGTTTTTATAGGCA  300

seq1  CATCTAATTTTCTTTTATAATCTAAAGCTTAAGTTGGAAAAGGTTCTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTAATTTTCTTTTATAATCTAAAGCTTAAGTTGGAAAAGGTTCTTCT  350

seq1  AATAAAACACCTGATATAGTGCAGATTTATAAATTATTTTGTAAAATGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAACACCTGATATAGTGCAGATTTATAAATTATTTTGTAAAATGTT  400

seq1  TAGAAATTTAAGTCCTAGTGCTTTCTTTAAGAGATAATTAAAAAAACAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATTTAAGTCCTAGTGCTTTCTTTAAGAGATAATTAAAAAAACAGG  450

seq1  AAATATAAATTAGGGAAATTCCTCTATTATATTGGACCCTATGCCTTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATAAATTAGGGAAATTCCTCTATTATATTGGACCCTATGCCTTTTT  500

seq1  GTGGTTATTAAGGATTTTCTTGGTTGAAGTGGTTGGGCCCAGATCCCTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTATTAAGGATTTTCTTGGTTGAAGTGGTTGGGCCCAGATCCCTGT  550

seq1  GGCCAGTTCCATTGCTAGGATGGTAGTTCTGGATTTGTATTATGAAAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGTTCCATTGCTAGGATGGTAGTTCTGGATTTGTATTATGAAAAAG  600

seq1  CAACCTGAGGGATCCATCAAAAAGCAAGGCAGCATCATGTACTGTCTTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTGAGGGATCCATCAAAAAGCAAGGCAGCATCATGTACTGTCTTTA  650

seq1  GGTGCCTGCTTAAGTTCCTGCCCTGATGAACATCTATGATAAACTAATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCCTGCTTAAGTTCCTGCCCTGATGAACATCTATGATAAACTAATTT  700

seq1  GTAAGCCAAATAAACCCATTTCTACTGAAAGTGGCTTTGGCCGTTATCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGCCAAATAAACCCATTTCTACTGAAAGTGGCTTTGGCCGTTATCTT  750

seq1  AGTTAGAGCTACAATTGCTATAATAAAAGATCATGAACCAAACATAGTCG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGAGCTACAATTGCTATAATAAAAGATCATGAACCAAACATAGTCG  800

seq1  GGAAGGAACTGTTTTAAAGAGCTGTTAAAAAATATTTAATTCTGTTCTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGAACTGTTTTAAAGAGCTGTTAAAAAATATTTAATTCTGTTCTCT  850

seq1  GAGCAACATATGACTTGCTTCCTTCCAATATAGTAGGGTATGGCATGTGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAACATATGACTTGCTTCCTTCCAATATAGTAGGGTATGGCATGTGG  900

seq1  CGTTTCCTCAAGGTCCAACTTATTGTCTCAGATATTTTATTTATGTTTTA  950
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CG-TTCCTCAAGGTCCAACTTATTGTCTCAGATATTTTATTTATGTTTTA  949

seq1  ATATGACACAAGTGAAAGCTTAATTTGATACATTTCTGATTTTGCTGGCT  1000
      |||||||||| ||||||||||||||||||||| |||||| ||||||||||
seq2  ATATGACACAGGTGAAAGCTTAATTTGATACA-TTCTGA-TTTGCTGGCT  997

seq1  ACCATGCTAGCTCTTATCTATGACATAAAGGATATGCTTTACCAAAGACC  1050
      | |||||||||||||||||||||||| |||||||||| |||||||||| |
seq2  A-CATGCTAGCTCTTATCTATGACAT-AAGGATATGC-TTACCAAAGA-C  1043

seq1  AGTGTAAGATTATTGACTTTGTAAAAGAATATTCATCAGTTGCATATTTA  1100
      ||||| ||| ||||||||||||||||| ||||||||||||||||||||||
seq2  AGTGT-AGA-TATTGACTTTGTAAAAG-ATATTCATCAGTTGCATATTTA  1090

seq1  CATATAAGGGAAGACAAAATAT  1122
      ||| | ||||||||| ||||||
seq2  CATTTTAGGGAAGACTAAATAT  1112