BAC Information

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BAC

Clone NameB6Ng01-137C08
Chromosome1 (Build37)
Map Location 46,190,167 - 46,356,134
singlet/doubletdoublet
Overlap geneDnahc7b
Upstream geneLOC383640, Col3a1, Col5a2, EG666799, LOC631429, LOC666814, EG666819, Wdr75, EG433297, LOC383644, Slc40a1, LOC670603, EG227054, LOC100042453, EG212225
Downstream geneLOC666855, Slc39a10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137C08.bB6Ng01-137C08.g
ACCDH936737DH936738
length1,087313
definitionDH936737|Mus musculus domesticus DNA, BAC clone: B6Ng01-137C08, 5' end.DH936738|Mus musculus domesticus DNA, BAC clone: B6Ng01-137C08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(46,355,050 - 46,356,134)(46,190,167 - 46,190,293)
sequence
gaattctttgttagcttacatttgagtaagatggttaaatccaaatggtt
agacctcagtaatttgcaaagttcttaaaggtgataataaattatttagt
aaaattagctgtatggtcatgtaaattttaatagagacaaatagggtatt
tttgttttattgtttgtttgtttgtttgttttaagaatggggcattgtat
tgaggttatcctcaaactcactgttcagactgagctctgctcaggctcat
aatcctcttgccctagcttcctaagtgcagggattataggtgccaccaca
caaggctctagaaacagacttttaaactaaaatatataaaagtttaagta
acaaagtcttcttaatttatattaactactctgaaattctgtcttgtctt
gccttgccttaattaatttcactgtctggttttaatgagtatacgtatat
gttcccatgtagaatagtaaataaatccatgacatcatgatagtgttact
gatctagacaagcatcatcaggctaggaggatactgaacaggggctccac
acacatggcaagcttcagatcctaccttcaattttaccccataaaattgt
ggaggttttggtgctttgctggggcatactctgggaaagctactcctcct
gattataagaatcctattttctacctctgaccagggagagacatgatagt
ctaatcttccgcaaagactagaaaatgacttactattacctcctcctcta
caggtaatacaactgggcctagagctgtgatcctctcgagttaaattttg
agttgagttatctagacacggagaatctttgacactggtatagtatcttg
gtatataccccagaccctctcccagtaactacagcatctaagctcctaca
gactgaacccttactgaccaagttgtcatgtattcagcagattcacagtg
agacaaaaggaaaatagcaacttgttccttttcgaagagcgagcggcaat
gtgacattgatggagttaggtgaagtgtctcctgagaatctgaagctaag
gctatcaaaggtagaaatagaaaaacacaaactggat
caggaccagaaagtgggagtgggtgggttggtgagcaggggaagagggga
gcagatagggggttttcagtggggaaaccaggaatgaggacaacatttgc
aatgtaaattaagtatctaataaatgattaaaaaagaatgcatactgctc
ctggagaggacctgagtttggttcccagcactcactttgggttgctggca
acccctggtgactccaactccagaacatctgattcccctttctggtctct
atgggcaattgaactcatgtgactttaatcttcctccaacaccatgcaca
tacttagaaataa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_46355050_46356134
seq2: B6Ng01-137C08.b_58_1133 (reverse)

seq1  ATCCAGTTTGTGTTTGTCTATCTCTCCCTGTGATGGCCCTTAGGCTTCAG  50
      ||||||||||||||| ||||| ||| ||| |||| | ||||| |||||||
seq2  ATCCAGTTTGTGTTTTTCTATTTCTACCTTTGATAG-CCTTA-GCTTCAG  48

seq1  ATTCTCA-GAGATCACTTCACCT-ACTCACTCTATGTCAACATCTGCCGC  98
      ||||||| |||| |||||||||| ||||  || ||||| |||| ||||||
seq2  ATTCTCAGGAGA-CACTTCACCTAACTCCATCAATGTC-ACAT-TGCCGC  95

seq1  TCGCTCTTCGAAAAGG-ACAAGTTGCTGTTTTCATTTTGTCTCACTGTGA  147
      |||||||||||||||| |||||||||| ||||| ||||||||||||||||
seq2  TCGCTCTTCGAAAAGGAACAAGTTGCTATTTTCCTTTTGTCTCACTGTGA  145

seq1  ATCTGCTG-ATACATGAGAACGCGGTCAGTAAGGGTTCAGTCTGTAGGAA  196
      |||||||| |||||||| |||  |||||||||||||||||||||||||| 
seq2  ATCTGCTGAATACATGACAACTTGGTCAGTAAGGGTTCAGTCTGTAGGAG  195

seq1  TACAGATGCTGTAGCTACTGGGAGAGGATCTGGGGTATATACCAAGATAC  246
         ||||||||||| |||||||||||| ||||||||||||||||||||||
seq2  CTTAGATGCTGTAGTTACTGGGAGAGGGTCTGGGGTATATACCAAGATAC  245

seq1  TATACCAGTGTCAAAGATTCTCCGTGTCTAGATAACTCAACTCAAAATTT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACCAGTGTCAAAGATTCTCCGTGTCTAGATAACTCAACTCAAAATTT  295

seq1  AACTAGAATAGGATCACAGCTCTAGGCCCAGTTGTATTACCAGTTAGAGG  346
      |||| | | |||||||||||||||||||||||||||||||| | ||||||
seq2  AACTCG-AGAGGATCACAGCTCTAGGCCCAGTTGTATTACCTG-TAGAGG  343

seq1  AGGAGGTAATAGTAAGTCATTTTCTAATCTTTCCGGCAGATTAGAATATC  396
      |||||||||||||||||||||||||| ||||| ||| |||||||| ||||
seq2  AGGAGGTAATAGTAAGTCATTTTCTAGTCTTTGCGGAAGATTAGACTATC  393

seq1  ATGTCTCTCCCTGGTCAGAGGTAG-AAATAGGATTCTTATAATCAGGAGG  445
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  ATGTCTCTCCCTGGTCAGAGGTAGAAAATAGGATTCTTATAATCAGGAGG  443

seq1  AGTAGCTTTCCCAGAGTATGCCCCAGCAAAGCACCAAAACCTCCACAATT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGCTTTCCCAGAGTATGCCCCAGCAAAGCACCAAAACCTCCACAATT  493

seq1  TTATGGGGTAAAATTGGAGGTGGGATCTGAAGCTTGCCATGTGTGTGGAG  545
      |||||||||||||||| |||| ||||||||||||||||||||||||||||
seq2  TTATGGGGTAAAATTGAAGGTAGGATCTGAAGCTTGCCATGTGTGTGGAG  543

seq1  CCCCTGTTCAGTATCCTCCTAGCCTAATGATGCTTGTCTAGATCAGTAAC  595
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CCCCTGTTCAGTATCCTCCTAGCCTGATGATGCTTGTCTAGATCAGTAAC  593

seq1  ACTATCATGATGTCATGGATTTATTTACTATTCCACATGGGAACATATAC  645
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ACTATCATGATGTCATGGATTTATTTACTATTCTACATGGGAACATATAC  643

seq1  ATATACTTATTAAAACCAGACAATGAAATTAATTAAGGCAATGCCAGACA  695
       |||||| |||||||||||||| |||||||||||||||||| || |||||
seq2  GTATACTCATTAAAACCAGACAGTGAAATTAATTAAGGCAAGGCAAGACA  693

seq1  AGACAGAATTTCAGAGAAGTTAATATAAATTAAGAAGACTTTGTTACTTA  745
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AGACAGAATTTCAGAGTAGTTAATATAAATTAAGAAGACTTTGTTACTTA  743

seq1  AACTTTTGTATATTTTAGTTTAAAAGTCTGTTTCTAGAGCCTTGTGTGGT  795
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTTATATATTTTAGTTTAAAAGTCTGTTTCTAGAGCCTTGTGTGGT  793

seq1  GGCACCTATAATCCCTGCACTTAGGAAGCTAGGGCAAGAGGATTATGAGC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACCTATAATCCCTGCACTTAGGAAGCTAGGGCAAGAGGATTATGAGC  843

seq1  CTGAGCAGAGCTCAGTCTGAACAGTGAGTTTGAGGATAAACTCAATACAA  895
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CTGAGCAGAGCTCAGTCTGAACAGTGAGTTTGAGGATAACCTCAATACAA  893

seq1  TGCCCCATTCTTAAAACAAACAAACAAACAAACAAATAATAATAAAACAA  945
      |||||||||||||||||||||||||||||||||       ||||||||||
seq2  TGCCCCATTCTTAAAACAAACAAACAAACAAAC-------AATAAAACAA  936

seq1  AAATACTCATTTTGTTTCTATTAAAATTTATATGACCATGCATCTAACTT  995
      |||||| |  ||||| |||||||||||||| |||||||| || |||| ||
seq2  AAATACCCTATTTGTCTCTATTAAAATTTACATGACCATACAGCTAATTT  986

seq1  TACTAAATAATTTATTATCATCTTTGAGAACTTTGCAAATTACTGAGGTC  1045
      |||||||||||||||||||| |||| ||||||||||||||||||||||||
seq2  TACTAAATAATTTATTATCACCTTTAAGAACTTTGCAAATTACTGAGGTC  1036

seq1  TAACCATTTGGATTTAACTATCTTACTCAAATGTAAGCTA  1085
      |||||||||||||||||| |||||||||||||||||||||
seq2  TAACCATTTGGATTTAACCATCTTACTCAAATGTAAGCTA  1076

seq1: chr1_46190167_46190293
seq2: B6Ng01-137C08.g_260_386

seq1  TTGGGCTGCTGGCAACCCCTGGTGACTCCAACTCCAGAGGATCAGAGTCC  50
      ||||| ||||||||||||||||||||||||||||||||  ||| || |||
seq2  TTGGGTTGCTGGCAACCCCTGGTGACTCCAACTCCAGAACATCTGATTCC  50

seq1  CTTTTCTGGCCTCTATGGGCAGTTGAACTCATGTGACTTTAATCTTCCTC  100
      | ||||||| ||||||||||| ||||||||||||||||||||||||||||
seq2  CCTTTCTGGTCTCTATGGGCAATTGAACTCATGTGACTTTAATCTTCCTC  100

seq1  CAACACCATGCACATACTTAGAAATAA  127
      |||||||||||||||||||||||||||
seq2  CAACACCATGCACATACTTAGAAATAA  127