BAC Information

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BAC

Clone NameB6Ng01-137K23
Chromosome1 (Build37)
Map Location 80,543,917 - 80,628,208
singlet/doubletdoublet
Overlap geneDock10
Upstream geneAp1s3, Wdfy1, Mrpl44, Serpine2, EG433326, LOC665064, LOC100039325, A830043J08Rik, 2310015K22Rik, Cul3, EG620899, 1700016L21Rik
Downstream geneLOC665092, 9430031J16Rik, EG621020
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137K23.bB6Ng01-137K23.g
ACCDH937139DH937140
length9961,066
definitionDH937139|Mus musculus domesticus DNA, BAC clone: B6Ng01-137K23, 5' end.DH937140|Mus musculus domesticus DNA, BAC clone: B6Ng01-137K23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(80,543,917 - 80,544,616)(80,627,129 - 80,628,208)
sequence
gaattcctcagataaataaagacataactacttcatcattcagaaatgca
acttaagtatatatgcccaaagcaactgaaatcagaacatttctcttttc
ttttttaaccaatacataaaaaaaaaccataaaatttcttcatgagaatg
aggcagcatgtaaagccttgtgtgtgtgtgtgtgtatacacatacatata
catacatgtatatatttatatatatgttgcatgtttaaatcagctaaaca
tatttatgtcctaaatacttattactcttctatcatgagaacattcaatg
cccttgcttctagcttttgaagtacattatgctacccagtatctactgtg
caacagtaaccaggccttctagcttctactgaatgaaccacactggatcc
gttttggccagtctttctccatacttcccttacatacttcatgagccttt
cagaaccacaactgtactttctcagcttctaggtgcctatggtttagaat
cacatataagtgagatcaagtgcaagttttccttatttctggctcattta
actcactggagtgagatccagttccatccaccatgccacaaatgatgcta
atatttaatgggcaaacagtatttcaccttgctatatgcattttgttcct
tagtagttggagccctagctggtgaatagcgcttcagtgaccatgtgcct
tttcaaggacatgacaaacatacctcttcttatttatagaatagggggat
ctatctatctatctatctatctatctatctatctatctatctatctatct
atccatctatctatctacctatcatctctttatctatcatttacctacat
atcatctctttgtcatctatctatctatctatctatctatctatctatct
atctatctatccatctatctatcatcatttatctatctatgtatcatcta
tctatttatctatctactatctatcatgtctgtttgtctgtctgca
gaattcctccaaagaacggaaacaaagaagaaaagaaatatttcattttt
ctgttgattttctgtatcgccaacaacacaaaaggccctggattgtactt
ggtttgaaagatggagatgaagcagagcctgtgttttacaatctgggaag
caggaaaatgctacttacaagggctcaccccccagtagccaggcctgcag
gtggcagataaaaaggaaaagggtttacagagagctgctttaagatgaag
aaatgcacacacacacacacacacacacacacacagacacacacacacac
acacacacacacacacacacacacaccaccaccaccaccaccaccaccac
caccaccaccatccatccatagaataatgctgaaagaacagtcttaacct
caaatactaatagcagccaatcattactgcctacttgccttgtgccagat
aggcatctaaaccattcacttataataattatgaagaaatgttacagcaa
agcatcctcttttaaagttgaggaaactgtgtcaaagaaacattaagaaa
cttacacgggcagtatcaaacaagcaagaatatattcagtgtctcatccc
aggccacagaggcagagtcccttgacttttgatggacaatgctaactgcc
agtgtgaagctttaccctagtgcctactggaaggaatctgcccttgcaac
catgctgcagcctctgcccaggccatcctggtagatacagttattagact
gcacagtaggaacattgttagagtttctgaaaacagataaataaagctag
cactaaagtggactcagacatttgcagggtttttgcagaatgctgtactg
agcttgcttcttgttcctccctgtatcaaattgcccaatgactccatgtg
gtggcaaggacaatgtcgtgttgctaggcacaaattgaaagatctagttt
catacatctggctcataaaaatctgaattttctctcacattactcttaca
ctgacagtgcacagctttttgtcaaggcagtgggcattctttcttagtct
cgatgattcataattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_80543917_80544616
seq2: B6Ng01-137K23.b_51_750

seq1  GAATTCCTCAGATAAATAAAGACATAACTACTTCATCATTCAGAAATGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCAGATAAATAAAGACATAACTACTTCATCATTCAGAAATGCA  50

seq1  ACTTAAGTATATATGCCCAAAGCAACTGAAATCAGAACATTTCTCTTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAAGTATATATGCCCAAAGCAACTGAAATCAGAACATTTCTCTTTTC  100

seq1  TTTTTTAACCAATACATAAAAAAAAACCATAAAATTTCTTCATGAGAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAACCAATACATAAAAAAAAACCATAAAATTTCTTCATGAGAATG  150

seq1  AGGCAGCATGTAAAGCCTTGTGTGTGTGTGTGTGTATACACATACATATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGCATGTAAAGCCTTGTGTGTGTGTGTGTGTATACACATACATATA  200

seq1  CATACATGTATATATTTATATATATGTTGCATGTTTAAATCAGCTAAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACATGTATATATTTATATATATGTTGCATGTTTAAATCAGCTAAACA  250

seq1  TATTTATGTCCTAAATACTTATTACTCTTCTATCATGAGAACATTCAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATGTCCTAAATACTTATTACTCTTCTATCATGAGAACATTCAATG  300

seq1  CCCTTGCTTCTAGCTTTTGAAGTACATTATGCTACCCAGTATCTACTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGCTTCTAGCTTTTGAAGTACATTATGCTACCCAGTATCTACTGTG  350

seq1  CAACAGTAACCAGGCCTTCTAGCTTCTACTGAATGAACCACACTGGATCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGTAACCAGGCCTTCTAGCTTCTACTGAATGAACCACACTGGATCC  400

seq1  GTTTTGGCCAGTCTTTCTCCATACTTCCCTTACATACTTCATGAGCCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGGCCAGTCTTTCTCCATACTTCCCTTACATACTTCATGAGCCTTT  450

seq1  CAGAACCACAACTGTACTTTCTCAGCTTCTAGGTGCCTATGGTTTAGAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACCACAACTGTACTTTCTCAGCTTCTAGGTGCCTATGGTTTAGAAT  500

seq1  CACATATAAGTGAGATCAAGTGCAAGTTTTCCTTATTTCTGGCTCATTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATATAAGTGAGATCAAGTGCAAGTTTTCCTTATTTCTGGCTCATTTA  550

seq1  ACTCACTGGAGTGAGATCCAGTTCCATCCACCATGCCACAAATGATGCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACTGGAGTGAGATCCAGTTCCATCCACCATGCCACAAATGATGCTA  600

seq1  ATATTTAATGGGCAAACAGTATTTCACCTTGCTATATGCATTTTGTTCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTAATGGGCAAACAGTATTTCACCTTGCTATATGCATTTTGTTCCT  650

seq1  TAGTAGTTGGAGCCCTAGCTGGTGAATAGCGCTTCAGTGACCATGTGCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAGTTGGAGCCCTAGCTGGTGAATAGCGCTTCAGTGACCATGTGCCT  700

seq1: chr1_80627129_80628208
seq2: B6Ng01-137K23.g_68_1133 (reverse)

seq1  AAATTATGAAATCATTCGAGACTAAGGAAAAGAATGCCCACTGCCTTTGA  50
      |||||||| ||||| |||||||||||  ||||||||||||||||| ||||
seq2  AAATTATG-AATCA-TCGAGACTAAG--AAAGAATGCCCACTGCC-TTGA  45

seq1  CAAAAAGCTGTGCACTGTCAGTGT-AGAGTAATGTGAGAGAAAATTCAAG  99
      |||||||||||||||||||||||| |||||||||||||||||||||| ||
seq2  CAAAAAGCTGTGCACTGTCAGTGTAAGAGTAATGTGAGAGAAAATTC-AG  94

seq1  ATTTTTATTGAGCCAGATGTATTGAAACTAGATTCTTTCCAATTTGTTGC  149
      ||||||| ||||||||||||| |||||||||| ||||| ||||||| |||
seq2  ATTTTTA-TGAGCCAGATGTA-TGAAACTAGA-TCTTT-CAATTTG-TGC  139

seq1  CTAGCAACCACGACATTTGTCCTTGCCACCACATGGAGTCATTGGGCAAT  199
      ||||||| ||||||| ||||||||||||||||||||||||||||||||||
seq2  CTAGCAA-CACGACA-TTGTCCTTGCCACCACATGGAGTCATTGGGCAAT  187

seq1  TTGATACAGGGAGGAACAAGAAGCAAGCTCAGTACAGCATTCTGCAAAAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATACAGGGAGGAACAAGAAGCAAGCTCAGTACAGCATTCTGCAAAAA  237

seq1  CCCTGCAAATGTCTGAGTCCACTTTAGTGCTAGCTTTATTTATCTGTTTT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCAAATGTCTGAGTCCACTTTAGTGCTAGCTTTATTTATCTGTTTT  287

seq1  CAGAAACTCTAACAATGTTCCTACTGTGCAGTCTAATAACTGTATCTACC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAACTCTAACAATGTTCCTACTGTGCAGTCTAATAACTGTATCTACC  337

seq1  AGGATGGCCTGGGCAGAGGCTGCAGCATGGTTGCAAGGGCAGATTCCTTC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGGCCTGGGCAGAGGCTGCAGCATGGTTGCAAGGGCAGATTCCTTC  387

seq1  CAGTAGGCACTAGGGTAAAGCTTCACACTGGCAGTTAGCATTGTCCATCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGGCACTAGGGTAAAGCTTCACACTGGCAGTTAGCATTGTCCATCA  437

seq1  AAAGTCAAGGGACTCTGCCTCTGTGGCCTGGGATGAGACACTGAATATAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCAAGGGACTCTGCCTCTGTGGCCTGGGATGAGACACTGAATATAT  487

seq1  TCTTGCTTGTTTGATACTGCCCGTGTAAGTTTCTTAATGTTTCTTTGACA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCTTGTTTGATACTGCCCGTGTAAGTTTCTTAATGTTTCTTTGACA  537

seq1  CAGTTTCCTCAACTTTAAAAGAGGATGCTTTGCTGTAACATTTCTTCATA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTCCTCAACTTTAAAAGAGGATGCTTTGCTGTAACATTTCTTCATA  587

seq1  ATTATTATAAGTGAATGGTTTAGATGCCTATCTGGCACAAGGCAAGTAGG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTATAAGTGAATGGTTTAGATGCCTATCTGGCACAAGGCAAGTAGG  637

seq1  CAGTAATGATTGGCTGCTATTAGTATTTGAGGTTAAGACTGTTCTTTCAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAATGATTGGCTGCTATTAGTATTTGAGGTTAAGACTGTTCTTTCAG  687

seq1  CATTATTCTATGGATGGATGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATTCTATGGATGGATGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTG  737

seq1  GTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTG  799
      |||  |||||||||||||||||||||||||||||||||||||||||||||
seq2  GTG--GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTG  785

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGCATTTCTTCATCTTAAAGCAGCTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGCATTTCTTCATCTTAAAGCAGCTC  835

seq1  TCTGTAAACCCTTTTCCTTTTTATCTGCCACCTGCAGGCCTGGCTACTGG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAAACCCTTTTCCTTTTTATCTGCCACCTGCAGGCCTGGCTACTGG  885

seq1  GGGGTGAGCCCTTGTAAGTAGCATTTTCCTGCTTCCCAGATTGTAAAACA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTGAGCCCTTGTAAGTAGCATTTTCCTGCTTCCCAGATTGTAAAACA  935

seq1  CAGGCTCTGCTTCATCTCCATCTTTCAAACCAAGTACAATCCAGGGCCTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTCTGCTTCATCTCCATCTTTCAAACCAAGTACAATCCAGGGCCTT  985

seq1  TTGTGTTGTTGGCGATACAGAAAATCAACAGAAAAATGAAATATTTCTTT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTTGTTGGCGATACAGAAAATCAACAGAAAAATGAAATATTTCTTT  1035

seq1  TCTTCTTTGTTTCCGTTCTTTGGAGGAATTC  1080
      |||||||||||||||||||||||||||||||
seq2  TCTTCTTTGTTTCCGTTCTTTGGAGGAATTC  1066