BAC Information

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BAC

Clone NameB6Ng01-140N19
Chromosome1 (Build37)
Map Location 37,360,004 - 37,540,880
singlet/doubletdoublet
Overlap geneInpp4a, 6330578E17Rik, Unc50, Mgat4a
Upstream geneArid5a, 4632411B12Rik, 4930533C12Rik, Lman2l, Cnnm4, Cnnm3, Ankrd23, Ankrd39, Sema4c, 1700024G10Rik, BC050210, EG623414, Cox5b, Actr1b, 4933424G06Rik, Zap70, Tmem131, EG241053, A230074B11Rik, 4921511C04Rik, Cnga3
Downstream gene2010300C02Rik, Tsga10, EG623661, Mitd1, Mrpl30, Gm776, 2300002O18Rik, Txndc9, EG666434, Eif5b, Rev1, EG329123, Aff3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-140N19.bB6Ng01-140N19.g
ACCDH939476DH939477
length5881,017
definitionDH939476|Mus musculus domesticus DNA, BAC clone: B6Ng01-140N19, 5' end.DH939477|Mus musculus domesticus DNA, BAC clone: B6Ng01-140N19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,360,004 - 37,360,531)(37,539,861 - 37,540,880)
sequence
gaattcttaaaaattaaacattctggggatgggtgagtgggtgggtgagg
gagcacctcagaagcaaaggggaaggggaatggggtgaaggactcaggga
ggggtgaccaggaagcgggagcaacatttggaatgtaaataaaataattt
aattaagaaaagagaaacccaaaacattctatacatacagtacttaaaac
ccaggaaatgaacatgacacggtgcagttatttaatgcacaggtcttatt
tagatgttagagattgctccaatgacgttctttatctaaaagaaaccccc
caccttgtttattgtttgggtgctttatgggcacagtctcttttagcgtt
cctttgtgtttaattgccatgtttgacgctgacatgtttgaagactattg
ttttagataatgcctctcagtttgggttccctgatacttgggttcaggtt
ggtgcttgttgcaggagcagcagagttgcagccttgtcaactggaagata
ctgcctacgacctcattaaacatgaagctaggcttgttagctttgatacc
ttgatgaggatgatgtgggcgtcacttgagatgtttca
gaattctctgcgttgtgctcatcctgagcccggtgtctcgtacagacctg
tgtgttctctggtttatgtgtgctactccaaagcctgcctcttcctttct
actcgcttctccctccgccccagctgctcaccttctgtgaggctacctct
ggtctcctagttaaattattgatagtgctaacaggcaaatatggaaaaaa
aatttttttaggcaaaacagggatttctacgaaggcatgaatatctccag
tttaaacatatgaggagagagtacggatgaaaagattctgggcatgcttt
tgtatgcctgtaaactcatatcttaggaggctgagacaggaggattgctg
caagttcagagccagccaaggctatgaaagactgttttttgaagtattgg
tctgtgaagagaatgtgtaggccaccgtgggtagtctctgcttcactaat
gtcactttttcttctctctatttttatttgtatattccttggttttcatt
ttaaaattcaaagtgttcacttttattttttaaattaatttcgggtttta
aggttcctctctcatcccaatgtccctaaacccttccttgcattctttca
aactcatggcctcatctttcataaattgctgctatctagaggttatatat
aggtgtgtgttaaacaggttgcgtgtacccgagatacgtaaatacaacct
gcttgatatgtatagtgtcactcaggtgtgtctttagatctgaccattcg
gtattggataacagatatgtgtgctttcctggggaagacccttttctcag
gaccccggccttccgcagtggcctgcagctctttgtgcaaggttgaggcc
tgtgggccttccccctttcgtatctgttggtgctgtccttactcgctctg
cttgggcagtcatgctgatgagactttatgagtggtggcttctgatgttc
taagaaaacgggcctgtagtgaacctcatttctctacctctggggtcttt
ccactcttctcctgaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_37360004_37360531
seq2: B6Ng01-140N19.b_48_575

seq1  GAATTCTTAAAAATTAAACATTCTGGGGATGGGTGAGTGGGTGGGTGAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAAAAATTAAACATTCTGGGGATGGGTGAGTGGGTGGGTGAGG  50

seq1  GAGCACCTCAGAAGCAAAGGGGAAGGGGAATGGGGTGAAGGACTCAGGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCACCTCAGAAGCAAAGGGGAAGGGGAATGGGGTGAAGGACTCAGGGA  100

seq1  GGGGTGACCAGGAAGCGGGAGCAACATTTGGAATGTAAATAAAATAATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTGACCAGGAAGCGGGAGCAACATTTGGAATGTAAATAAAATAATTT  150

seq1  AATTAAGAAAAGAGAAACCCAAAACATTCTATACATACAGTACTTAAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAGAAAAGAGAAACCCAAAACATTCTATACATACAGTACTTAAAAC  200

seq1  CCAGGAAATGAACATGACACGGTGCAGTTATTTAATGCACAGGTCTTATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGAAATGAACATGACACGGTGCAGTTATTTAATGCACAGGTCTTATT  250

seq1  TAGATGTTAGAGATTGCTCCAATGACGTTCTTTATCTAAAAGAAACCCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGTTAGAGATTGCTCCAATGACGTTCTTTATCTAAAAGAAACCCCC  300

seq1  CACCTTGTTTATTGTTTGGGTGCTTTATGGGCACAGTCTCTTTTAGCGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTGTTTATTGTTTGGGTGCTTTATGGGCACAGTCTCTTTTAGCGTT  350

seq1  CCTTTGTGTTTAATTGCCATGTTTGACGCTGACATGTTTGAAGACTATTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGTGTTTAATTGCCATGTTTGACGCTGACATGTTTGAAGACTATTG  400

seq1  TTTTAGATAATGCCTCTCAGTTTGGGTTCCCTGATACTTGGGTTCAGGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGATAATGCCTCTCAGTTTGGGTTCCCTGATACTTGGGTTCAGGTT  450

seq1  GGTGCTTGTTGCAGGAGCAGCAGAGTTGCAGCCTTGTCAACTGGAAGATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCTTGTTGCAGGAGCAGCAGAGTTGCAGCCTTGTCAACTGGAAGATA  500

seq1  CTGCCTACGACCTCATTAAACATGAAGC  528
      ||||||||||||||||||||||||||||
seq2  CTGCCTACGACCTCATTAAACATGAAGC  528

seq1: chr1_37539861_37540880
seq2: B6Ng01-140N19.g_66_1082 (reverse)

seq1  CTTCAGGAGAAGGGTGGAAAGACCCAAGAGGTAGAGAAATGGAGTTCACT  50
      |||||||||||| |||||||||||| |||||||||||||||  |||||||
seq2  CTTCAGGAGAAGAGTGGAAAGACCCCAGAGGTAGAGAAATGAGGTTCACT  50

seq1  CCGAGGCCGTGTCTCCTAAGAACATCAGAAGCCA-CACTCATAAAGTCTC  99
       | |||||  || | || |||||||||||||||| |||||||||||||||
seq2  AC-AGGCC-CGTTTTCTTAGAACATCAGAAGCCACCACTCATAAAGTCTC  98

seq1  ATCAGCATGGCTGCCCAAGCAGGAGCGGAGTAAGGACAGCACCAACAGAT  149
      ||||||||| ||||||||||| |||| |||||||||||||||||||||||
seq2  ATCAGCATGACTGCCCAAGCA-GAGC-GAGTAAGGACAGCACCAACAGAT  146

seq1  ACGGAAGGGGGAAGGCCCACAGGCCTCAACCTTGCACAAAGAGCTGCAGG  199
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAAAGGGGGAAGGCCCACAGGCCTCAACCTTGCACAAAGAGCTGCAGG  196

seq1  CCACTGCGGAAGGCCGGGGTCCTGAGAAAAGGGTCTTCCCCAGGAAAGCA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGCGGAAGGCCGGGGTCCTGAGAAAAGGGTCTTCCCCAGGAAAGCA  246

seq1  CACATATCTGTTATCCAATACCGAATGGTCAGATCTAAAGACACACCTGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATATCTGTTATCCAATACCGAATGGTCAGATCTAAAGACACACCTGA  296

seq1  GTGACACTATACATATCAAGCAGGTTGTATTTACGTATCTCGGGTACACG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACACTATACATATCAAGCAGGTTGTATTTACGTATCTCGGGTACACG  346

seq1  CAACCTGTTTAACACACACCTATATATAACCTCTAGATAGCAGCAATTTA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTGTTTAACACACACCTATATATAACCTCTAGATAGCAGCAATTTA  396

seq1  TGAAAGATGAGGCCATGAGTTTGAAAGAATGCAAGGAAGGGTTTAGGGAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGATGAGGCCATGAGTTTGAAAGAATGCAAGGAAGGGTTTAGGGAC  446

seq1  ATTGGGATGAGAGAGGAACCTTAAAACCCGAAATTAATTTAAAAAATAAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGGATGAGAGAGGAACCTTAAAACCCGAAATTAATTTAAAAAATAAA  496

seq1  AGTGAACACTTTGAATTTTAAAATGAAAACCAAGGAATATACAAATAAAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAACACTTTGAATTTTAAAATGAAAACCAAGGAATATACAAATAAAA  546

seq1  ATAGAGAGAAGAAAAAGTGACATTAGTGAAGCAGAGACTACCCACGGTGG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGAGAAGAAAAAGTGACATTAGTGAAGCAGAGACTACCCACGGTGG  596

seq1  CCTACACATTCTCTTCACAGACCAATACTTCAAAAAACAGTCTTTCATAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACACATTCTCTTCACAGACCAATACTTCAAAAAACAGTCTTTCATAG  646

seq1  CCTTGGCTGGCTCTGAACTTGCAGCAATCCTCCTGTCTCAGCCTCCTAAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGCTGGCTCTGAACTTGCAGCAATCCTCCTGTCTCAGCCTCCTAAG  696

seq1  ATATGAGTTTACAGGCATACAAAAGCATGCCCAGAATCTTTTCATCCGTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAGTTTACAGGCATACAAAAGCATGCCCAGAATCTTTTCATCCGTA  746

seq1  CTCTCTCCTCATATGTTTAAACTGGAGATATTCATGCCTTCGTAGAAATC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCCTCATATGTTTAAACTGGAGATATTCATGCCTTCGTAGAAATC  796

seq1  CCTGTTTTGCCTAAAAAAATTTTTTTTCCATATTTGCCTGTTAGCACTAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTTTGCCTAAAAAAATTTTTTTTCCATATTTGCCTGTTAGCACTAT  846

seq1  CAATAATTTAACTAGGAGACCAGAGGTAGCCTCACAGAAGGTGAGCAGCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAATTTAACTAGGAGACCAGAGGTAGCCTCACAGAAGGTGAGCAGCT  896

seq1  GGGGCGGAGGGAGAAGCGAGTAGAAAGGAAGAGGCAGGCTTTGGAGTAGC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCGGAGGGAGAAGCGAGTAGAAAGGAAGAGGCAGGCTTTGGAGTAGC  946

seq1  ACACATAAACCAGAGAACACACAGGTCTGTACGAGACACCGGGCTCAGGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATAAACCAGAGAACACACAGGTCTGTACGAGACACCGGGCTCAGGA  996

seq1  TGAGCACAACGCAGAGAATTC  1020
      |||||||||||||||||||||
seq2  TGAGCACAACGCAGAGAATTC  1017