BAC Information

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BAC

Clone NameB6Ng01-142C14
Chromosome1 (Build37)
Map Location 111,094,748 - 111,095,875
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC435640, EG626474
Downstream geneEG666508, Cdh7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-142C14.bB6Ng01-142C14.g
ACCDH940428DH940429
length8061,116
definitionDH940428|Mus musculus domesticus DNA, BAC clone: B6Ng01-142C14, 5' end.DH940429|Mus musculus domesticus DNA, BAC clone: B6Ng01-142C14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcataatatatacacaaaagctctgtggaagagagggagaggggga
agggggagggagaaagaacatgatattttaagaattttgaaagatgttgt
ttattttacatggtgcaagtggcatgcaacacagtttgactcccttggag
aaaatgaaacttctgtttccaagagattattatatgcagatttcttttcc
attaggagtagatgtgtgtgtccaagtctcctttcatttttagtgccgga
tactgcctcagtttctgagctcatatgatcaatgttttccttgatttaga
gggctttctttctttggtgtcctgtatactttctggcacttgcactcttt
ctgcctctttttgcagagttccctgaggcatatgggaagagtatcacaga
gacttctcatttatgatgaagtgttctaatatatctgactctttgtggga
ctcttcatcttttccattctgctgcaataagaagcttctctggtcatggc
tgagaaaggtactgacctatgagtacaggagaaagttattaggaggtatt
gattgctatatttatttagtagaacaatagtatttggttttaacctatgt
tcccaggatactaattctccagttcttggttacccaaggagtgttgagta
tgggtttcatctcctacaatgtactttttgtcaaataaaaaaatactaaa
caaaactggttgtttattttccacaagttttattctagcactacactagg
ttttatcttgcaggggccgacatcatttgaagattcaagggatatagctg
ggttgg

gaattcacaagctgagtgacagatgggttacaaggaaggtaataaacaac
agaatgttctacagagttttagtagtgttcttaatcacctattattatgt
ttagacatttcttggcattttttatttctattttaattaacagttttctt
gtagctacacagaatatatatttgaaaacttcgcctttctttctgaagtt
catttttatttactatatgtaaaaccaattgctattatccccatataatg
tgttaaatggtctaatcattcagataacgttatctgctttttccgggcaa
atagctatgaatcaatgatcatgctgaagttcaaaactcattcatttctt
ttgcatcaaaatatcaagataaagttcatttatctgttaatttaaattca
ttattcagcgatgagatcagggatgcgatgacagagcaaccacactgtca
cttccttatgctttgccaaatgtttgttgtgaggtcctgagcagggcctg
aagtacacggcagacttgctattggaagaatcttctatggccactgtcaa
tacatatctgaattgtgaagaatcattcttgttagaacatggagaagaaa
gctgtgacagaaaaaggaatatcaagttttcaatggttgaatgtctcttt
gttaaatcaacctcattgctgcctccaaagggaggggaccacttccccgt
ctatctctgctttagtacaccgtcatattcttgcatacagtggctgtgct
ctctaattttaatcaacctgagccaagttagcatcatcaaaggcgaagaa
atctaatttgggaaaatcccttcataaatttgtgctatagggaattgtgt
tgggcactgttttttccaattagagaatggtggaggaggaccccatcact
tgaagttggtgtcattcctgagctgtagtcctggcttctataagaaagca
ggcaaacaagccacgagagtagctcattaaacaacagctttctatagctt
catctcagcttctgcctcaaagttccagccccatctgaatgctatccgga
cttccttgattatcatagtgcttgcaagttaagcaaatatatttttttcc
tgaggtgtttttggtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_111094748_111095875
seq2: B6Ng01-142C14.g_69_1184 (reverse)

seq1  GACCAAAAACACCTTCAGGAGAAAAATATAATTTTGCTTTTACTTGCAAG  50
      ||||||||||||| |||||| |||||||||  ||||| || |||||||||
seq2  GACCAAAAACACC-TCAGGAAAAAAATATA--TTTGC-TTAACTTGCAAG  46

seq1  CACTATGGATAATTCAAGGAAGTCGGGATAGGCATTCAGATGGGGCTGGA  100
      |||||| ||||| ||||||||||| ||||| |||||||||||||||||||
seq2  CACTAT-GATAA-TCAAGGAAGTCCGGATA-GCATTCAGATGGGGCTGGA  93

seq1  ACTTTGAGGCAGAAGCTGAGGATGAAGCTATAGAAAGCTGTTGTTTAATG  150
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  ACTTTGAGGCAGAAGCTGA-GATGAAGCTATAGAAAGCTGTTGTTTAATG  142

seq1  AGCTACTCCTCGTGGCTTGTTTTGCCTGCTTTCTTATAGAAGCCAGGACT  200
      ||||||| ||||||||||| ||||||||||||||||||||||||||||||
seq2  AGCTACT-CTCGTGGCTTG-TTTGCCTGCTTTCTTATAGAAGCCAGGACT  190

seq1  ACAAGCTCAGGAATGACACCAACTTCAAGTGATGGGGTCCTCCTCCACCA  250
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AC-AGCTCAGGAATGACACCAACTTCAAGTGATGGGGTCCTCCTCCACCA  239

seq1  TTCTCTAATTGGAAAAAAACAGTGCCCAACACAATTCCCTATAGCACAAA  300
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TTCTCTAATTGG-AAAAAACAGTGCCCAACACAATTCCCTATAGCACAAA  288

seq1  TTTATGAAGGGATTTTCCCAAATTAGATTTCTTCGCCTTTGATGATGCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGAAGGGATTTTCCCAAATTAGATTTCTTCGCCTTTGATGATGCTA  338

seq1  ACTTGGCTCAGGTTGATTAAAATTAGAGAGCACAGCCACTGTATGCAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGCTCAGGTTGATTAAAATTAGAGAGCACAGCCACTGTATGCAAGA  388

seq1  ATATGACGGTGTACTAAAGCAGAGATAGACGGGGAAGTGGTCCCCTCCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGACGGTGTACTAAAGCAGAGATAGACGGGGAAGTGGTCCCCTCCCT  438

seq1  TTGGAGGCAGCAATGAGGTTGATTTAACAAAGAGACATTCAACCATTGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGGCAGCAATGAGGTTGATTTAACAAAGAGACATTCAACCATTGAA  488

seq1  AACTTGATATTCCTTTTTCTGTCACAGCTTTCTTCTCCATGTTCTAACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGATATTCCTTTTTCTGTCACAGCTTTCTTCTCCATGTTCTAACAA  538

seq1  GAATGATTCTTCACAATTCAGATATGTATTGACAGTGGCCATAGAAGATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGATTCTTCACAATTCAGATATGTATTGACAGTGGCCATAGAAGATT  588

seq1  CTTCCAATAGCAAGTCTGCCGTGTACTTCAGGCCCTGCTCAGGACCTCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAATAGCAAGTCTGCCGTGTACTTCAGGCCCTGCTCAGGACCTCAC  638

seq1  AACAAACATTTGGCAAAGCATAAGGAAGTGACAGTGTGGTTGCTCTGTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAACATTTGGCAAAGCATAAGGAAGTGACAGTGTGGTTGCTCTGTCA  688

seq1  TCGCATCCCTGATCTCATCGCTGAATAATGAATTTAAATTAACAGATAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCATCCCTGATCTCATCGCTGAATAATGAATTTAAATTAACAGATAAA  738

seq1  TGAACTTTATCTTGATATTTTGATGCAAAAGAAATGAATGAGTTTTGAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTTTATCTTGATATTTTGATGCAAAAGAAATGAATGAGTTTTGAAC  788

seq1  TTCAGCATGATCATTGATTCATAGCTATTTGCCCGGAAAAAGCAGATAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCATGATCATTGATTCATAGCTATTTGCCCGGAAAAAGCAGATAAC  838

seq1  GTTATCTGAATGATTAGACCATTTAACACATTATATGGGGATAATAGCAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATCTGAATGATTAGACCATTTAACACATTATATGGGGATAATAGCAA  888

seq1  TTGGTTTTACATATAGTAAATAAAAATGAACTTCAGAAAGAAAGGCGAAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTTTACATATAGTAAATAAAAATGAACTTCAGAAAGAAAGGCGAAG  938

seq1  TTTTCAAATATATATTCTGTGTAGCTACAAGAAAACTGTTAATTAAAATA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAAATATATATTCTGTGTAGCTACAAGAAAACTGTTAATTAAAATA  988

seq1  GAAATAAAAAATGCCAAGAAATGTCTAAACATAATAATAGGTGATTAAGA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAAAAAATGCCAAGAAATGTCTAAACATAATAATAGGTGATTAAGA  1038

seq1  ACACTACTAAAACTCTGTAGAACATTCTGTTGTTTATTACCTTCCTTGTA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTACTAAAACTCTGTAGAACATTCTGTTGTTTATTACCTTCCTTGTA  1088

seq1  ACCCATCTGTCACTCAGCTTGTGAATTC  1128
      ||||||||||||||||||||||||||||
seq2  ACCCATCTGTCACTCAGCTTGTGAATTC  1116


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