BAC Information

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BAC

Clone NameB6Ng01-142N18
Chromosome1 (Build37)
Map Location 147,895,387 - 147,896,499
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC625057, LOC383570
Downstream geneLOC383571, B830045N13Rik, LOC100043240
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-142N18.bB6Ng01-142N18.g
ACCDH940950DH940951
length1,1761,095
definitionDH940950|Mus musculus domesticus DNA, BAC clone: B6Ng01-142N18, 5' end.DH940951|Mus musculus domesticus DNA, BAC clone: B6Ng01-142N18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctaccagaccttcaaagaagacctgataccaattttcatcaaaat
gttccataaaataaaaaacagaaggaagaatactgtctagctcattctat
gaatccacaattactctgatacctaaagcacacaaggacccccccccaaa
aaagaactttagaccaatctcccttatgaatattaaagcaaaaaaattca
ataaaatttttgcaaacagaatccaagaatacatcaaaaccatcattcac
cacaatcaaataggcttcatcccaggcatgcaaggttgctttaatatatg
aaaatccattaattcaatccactgtataaagaaactgaaagaaaaaaatc
acattatcatctccttagattcagaaacagcatttcaaaaaaacaaaaaa
acaaaaaaaaaaaaaacaaaaaacaaaaaaacaaaaacaaaaacaaacaa
acaaaaaaaaaaaaccacccatttatgttaaaagtattagatagctctga
ccctggaactcaggtgagtttgtcattttctctccagtgtttctctaagg
cgggcccatgcaggagagcacaggccacagaagcaacagagcttctcagt
cctactatggggcttcaacatcagccatgaggcggggctgatcctcagtc
ttctgtgcatcttccctgccagaggagagcttgtctccagtgcgtgcgct
gaccccaggactcaggtgagataaccattttccctctggtgtctctctaa
ggctgggcctgctcaggagagcacaggcaacggaacttctaggccagggt
cctacaggcctacatctgcaaccaggatgtgggttattccgcagccctct
gcactggtcttacactgcactggtcttgccaggagagagctgatctccca
ggagtgctgacacaggcttacagactcacagaaagaacagctcagcctga
gacagctagacatctacacagagattaccagtggcgaagcaacataagat
ctacaacagaacagactactgcatcatcagacccagtatccaccacagct
agtctgatcccacgacataagcacacatgtataatctaccatgatgctgt
gagaatttagaggcatataactacttagatcgaatcgcttacggtgagtc
taaaggaaccaaatccttagaatttc
gaattctttccagggttttgattagattttggtaattcctatgacacagg
ctaagaaataaatcctgtttttgaaagatgtatcacctacctaataaagc
tttttaggagaaacaaagaatgtctcccaagttcatccagtattttctta
ttccatgtattagttaacattcttatagttttagaaattatctatcaaaa
aacaatttgggaagcgtgtttttaggtttatatagtccaattctagatat
ctattcaaagaccagaaaacaaaacaaaacaacaacatcaacaaaaacaa
accacactgaaaaaagcaaactaatagattttttagtaactactaactga
tataaaacatttgttgttattttcttactagctagaaagaaatctgtatt
atataactttatgagcatccagaatccttgtttgtgtgtctcttcaagac
aagctcttattaaacagcttcagggatgagtatgcttcccttataagaaa
aactgttgttattcataaaggaaaaacaagtaataaaaatagtctctaaa
atataaaatcttctcacagaatatgtaactgacaatacaatcgtttgggt
ctttggtctataatgttgagtttaggtcaagttatctttatattttgtct
ctatccttttctgtttttaaaaatattttttataaagcatactgacattt
gagttttcactctgggccttttatccatcgcaatgtgactgatgcctatg
ccgagcttctcataaacaattttatctattgaaagccaaggctttcttga
ctcctcaccagctcacttctcctgtgtatataactctatcttctgagttg
ctgaggcttcaattgtcccaatgagctcaaataaactttgcccttcagtc
tgagtataagcagtacactactctgggtgtacggaactcaaatgtgatct
gtgaaagcttaaatcttattaaagcagattcatataaaacatctgggtct
accctccctcatttggcatactcccctcacaaaatattcatttttctcag
atctataaacctggagaaagatgaaggagcccagtcaatctgtaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_147895387_147896499
seq2: B6Ng01-142N18.g_70_1164

seq1  GAATTCTTTCCAGGGTTTTGATTAGATTTTGGTAATTCCTATGACACAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCCAGGGTTTTGATTAGATTTTGGTAATTCCTATGACACAGG  50

seq1  CTAAGAAATAAATCCTGTTTTTGAAAGATGTATCACCTACCTAATAAAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGAAATAAATCCTGTTTTTGAAAGATGTATCACCTACCTAATAAAGC  100

seq1  TTTTTAGGAGAAACAAAGAATGTCTCCCAAGTTCATCCAGTATTTTCTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAGGAGAAACAAAGAATGTCTCCCAAGTTCATCCAGTATTTTCTTA  150

seq1  TTCCATGTATTAGTTAACATTCTTATAGTTTTAGAAATTATCTATCAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATGTATTAGTTAACATTCTTATAGTTTTAGAAATTATCTATCAAAA  200

seq1  AACAATTTGGGAAGCGTGTTTTTAGGTTTATATAGTCCAATTCTAGATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATTTGGGAAGCGTGTTTTTAGGTTTATATAGTCCAATTCTAGATAT  250

seq1  CTATTCAAAGACCAGAAAACAAAACAAAACAACAACATCAACAAAAACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCAAAGACCAGAAAACAAAACAAAACAACAACATCAACAAAAACAA  300

seq1  ACCACACTGAAAAAAGCAAACTAATAGATTTTTTAGTAACTACTAACTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACACTGAAAAAAGCAAACTAATAGATTTTTTAGTAACTACTAACTGA  350

seq1  TATAAAACATTTGTTGTTATTTTCTTACTAGCTAGAAAGAAATCTGTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAACATTTGTTGTTATTTTCTTACTAGCTAGAAAGAAATCTGTATT  400

seq1  ATATAACTTTATGAGCATCCAGAATCCTTGTTTGTGTGTCTCTTCAAGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAACTTTATGAGCATCCAGAATCCTTGTTTGTGTGTCTCTTCAAGAC  450

seq1  AAGCTCTTATTAAACAGCTTCAGGGATGAGTATGCTTCCCTTATAAGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCTTATTAAACAGCTTCAGGGATGAGTATGCTTCCCTTATAAGAAA  500

seq1  AACTGTTGTTATTCATAAAGGAAAAACAAGTAATAAAAATAGTCTCTAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTTGTTATTCATAAAGGAAAAACAAGTAATAAAAATAGTCTCTAAA  550

seq1  ATATAAAATCTTCTCACAGAATATGTAACTGACAATACAATCGTTTGGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAAATCTTCTCACAGAATATGTAACTGACAATACAATCGTTTGGGT  600

seq1  CTTTGGTCTATAATGTTGAGTTTAGGTCAAGTTATCTTTATATTTTGTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGTCTATAATGTTGAGTTTAGGTCAAGTTATCTTTATATTTTGTCT  650

seq1  CTATCCTTTTCTGTTTTTAAAAATATTTTTTATAAAGCATACTGACATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCTTTTCTGTTTTTAAAAATATTTTTTATAAAGCATACTGACATTT  700

seq1  GAGTTTTCACTCT-GGCCTTTTATCCATCGCAATGTGACTGATGCCTATG  749
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GAGTTTTCACTCTGGGCCTTTTATCCATCGCAATGTGACTGATGCCTATG  750

seq1  CCGAGCTTCTCATAAACAATTTTATCTATTGAAAGCCAAGGCTTTCTTGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAGCTTCTCATAAACAATTTTATCTATTGAAAGCCAAGGCTTTCTTGA  800

seq1  CTCCTCACCAGCTCACTTCTCCTGTGTATATAACTCTATCTTCTGAGTTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCACCAGCTCACTTCTCCTGTGTATATAACTCTATCTTCTGAGTTG  850

seq1  CTGAGGCTTCAATTGTCCCAATGAGCTCAAATAAACTTTGCCCCTTCAGT  899
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CTGAGGCTTCAATTGTCCCAATGAGCTCAAATAAACTTTG-CCCTTCAGT  899

seq1  CTGAGTATAAAGCAGTACAACTACTCTGGGTGTACGGAACTCAAATGTGA  949
      |||||||| ||||||||| |||||||||||||||||||||||||||||||
seq2  CTGAGTAT-AAGCAGTAC-ACTACTCTGGGTGTACGGAACTCAAATGTGA  947

seq1  TCTTGTGAAAGGCTTAAATCTTATTAAAGCAGATTCATATAAAACAATCT  999
      || ||||||| |||||||||||||||||||||||||||||||||| ||||
seq2  TC-TGTGAAA-GCTTAAATCTTATTAAAGCAGATTCATATAAAAC-ATCT  994

seq1  GGGTCTTACCCTTCTCTCATTTGGCCAATACT-CCCTCACAAAATAATTC  1048
      ||||| ||||| || ||||||||||  ||||| |||||||||||| ||||
seq2  GGGTC-TACCC-TCCCTCATTTGGC--ATACTCCCCTCACAAAAT-ATTC  1039

seq1  ATTTTTCCCAAGAATCTATAAAACCTGGAGAAAAGATGAAAGGAGCCCAG  1098
      ||||||| ||   |||||| |||||||||| ||||||| |||||||||||
seq2  ATTTTTCTCA--GATCTAT-AAACCTGGAG-AAAGATG-AAGGAGCCCAG  1084

seq1  AGTTCAATCCTGTAA  1113
         ||||| ||||||
seq2  ---TCAAT-CTGTAA  1095