BAC Information

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BAC

Clone NameB6Ng01-143L07
Chromosome1 (Build37)
Map Location 145,510,506 - 145,511,339
singlet/doubletsinglet
Overlap geneCdc73
Upstream geneLOC545369, B3galt2
Downstream geneLOC623138, Glrx2, Trove2, Uchl5, Rgs2, Rgs13, Rbm6-ps2, Rgs1, EG639456, Rgs21
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-143L07.bB6Ng01-143L07.g
ACCDH941572DH941573
length8271,140
definitionDH941572|Mus musculus domesticus DNA, BAC clone: B6Ng01-143L07, 5' end.DH941573|Mus musculus domesticus DNA, BAC clone: B6Ng01-143L07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattgcccacatgacttcctttctgttatgtatatgattcatatt
tgctgatattattcttaaaagtttgatatgcttagttcatgtaattcctg
agattaggactgacctacattaggattgatctttgcaactttgaacagag
ttctcttgacacatagctaacttagtacattaataatttttatagtgtct
tttttctgtatgtgttagataggcttgtgctttagtagtcctagctctaa
gttactaaaacatataaataaaagtcatggcaaatgtcttgataaactgt
aaggtattgaggaatagagagctggttccgtggttaagagcacttgttgc
tcttcctgaggaccccagtttggttcctatcacccaggtttggcagttca
cactagcttgcacctacggcttcaggagatccgaggcctctgtgtacaca
tgcactcagatgcacatgcgcatacacccttaaggtataaatttgtgtgg
taaaatctggttaactttttctttcctggaggtgggaaatcacatttttt
tgaaaaaattgtattttggtattgcttttttaagacagggtttcactatg
tatgtagccttggttggctcaaatttgctatatggaccaggatagcctca
aactttaagttttcacctgtatctgcctattgactagattaaaagcatgg
gccactactttataaaggaaaattcctctttgtagtcacactagtcttgt
atatcttggtcaggatctcttctgtctcagctgtctacatagctggtgtt
cagtacatgtgcatcccctagcttctg
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgcagagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctccacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatagacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaatcc
taggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaattgggaa
caaaacacccatagaaggagttacaaagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatatactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacaggctccaat
ggaggagctagagaagtacccaagagctaaaggaactgcaaccctatagt
gacacatatgactaaccagtaccgagctcttgactctagctgcatatgta
tcaaagatgcctagtcgcatcgtgaaagagagtccatgaccgcaacttta
tgcctcattaggacgcagggctaaagggaatggtggtgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_145510506_145511339
seq2: B6Ng01-143L07.b_46_872 (reverse)

seq1  CAGAAGCTAGGTGATGCAACATGTACCTGAACACCAGCTATGTAGACAGC  50
      ||||||||||| ||||| ||||||| ||||||||||||||||||||||||
seq2  CAGAAGCTAGGGGATGC-ACATGTA-CTGAACACCAGCTATGTAGACAGC  48

seq1  TGAGACAGAAGGAGATCCCTGACCAAGATATACAAGACTAGTGTGACCTA  100
      |||||||||| ||||| ||||||||||||||||||||||||||||| |||
seq2  TGAGACAGAA-GAGAT-CCTGACCAAGATATACAAGACTAGTGTGA-CTA  95

seq1  CAAAGA-GAATTTTCCTTTATAAAGTAGTGGCCCATGCTTTTAATCTTAG  149
      |||||| ||||||||||||||||||||||||||||||||||||||| |||
seq2  CAAAGAGGAATTTTCCTTTATAAAGTAGTGGCCCATGCTTTTAATC-TAG  144

seq1  TCAATAGGCAGATACAGGTGAAAAACTTAAAGTTTGAGGCTATCCTGGTC  199
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TCAATAGGCAGATACAGGTG-AAAACTTAAAGTTTGAGGCTATCCTGGTC  193

seq1  CATATAGCAAATTTGAGCCAACCAAGGCTACATACATAGTGAAACCCTGT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATAGCAAATTTGAGCCAACCAAGGCTACATACATAGTGAAACCCTGT  243

seq1  CTTAAAAAAGCAATACCAAAATACAATTTTTTTCAAAAAAATGTGATTTC  299
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CTTAAAAAAGCAATACCAAAATACAA-TTTTTTCAAAAAAATGTGATTTC  292

seq1  CCACCTCCAGGAAAGAAAAAGTTAACCAGATTTTACCACACAAATTTATA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTCCAGGAAAGAAAAAGTTAACCAGATTTTACCACACAAATTTATA  342

seq1  CCTTAAGGGTGTATGCGCATGTGCATCTGAGTGCATGTGTACACAGAGGC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAAGGGTGTATGCGCATGTGCATCTGAGTGCATGTGTACACAGAGGC  392

seq1  CTCGGATCTCCTGAAGCCGTAGGTGCAAGCTAGTGTGAACTGCCAAACCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGGATCTCCTGAAGCCGTAGGTGCAAGCTAGTGTGAACTGCCAAACCT  442

seq1  GGGTGATAGGAACCAAACTGGGGTCCTCAGGAAGAGCAACAAGTGCTCTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGATAGGAACCAAACTGGGGTCCTCAGGAAGAGCAACAAGTGCTCTT  492

seq1  AACCACGGAACCAGCTCTCTATTCCTCAATACCTTACAGTTTATCAAGAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACGGAACCAGCTCTCTATTCCTCAATACCTTACAGTTTATCAAGAC  542

seq1  ATTTGCCATGACTTTTATTTATATGTTTTAGTAACTTAGAGCTAGGACTA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCCATGACTTTTATTTATATGTTTTAGTAACTTAGAGCTAGGACTA  592

seq1  CTAAAGCACAAGCCTATCTAACACATACAGAAAAAAGACACTATAAAAAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGCACAAGCCTATCTAACACATACAGAAAAAAGACACTATAAAAAT  642

seq1  TATTAATGTACTAAGTTAGCTATGTGTCAAGAGAACTCTGTTCAAAGTTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAATGTACTAAGTTAGCTATGTGTCAAGAGAACTCTGTTCAAAGTTG  692

seq1  CAAAGATCAATCCTAATGTAGGTCAGTCCTAATCTCAGGAATTACATGAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGATCAATCCTAATGTAGGTCAGTCCTAATCTCAGGAATTACATGAA  742

seq1  CTAAGCATATCAAACTTTTAAGAATAATATCAGCAAATATGAATCATATA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGCATATCAAACTTTTAAGAATAATATCAGCAAATATGAATCATATA  792

seq1  CATAACAGAAAGGAAGTCATGTGGGCAATGAATTC  834
      |||||||||||||||||||||||||||||||||||
seq2  CATAACAGAAAGGAAGTCATGTGGGCAATGAATTC  827