BAC Information

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BAC

Clone NameB6Ng01-144B20
Chromosome1 (Build37)
Map Location 151,587,731 - 151,684,130
singlet/doubletdoublet
Overlap geneLOC100042813, Pla2g4a
Upstream geneLOC100042792, LOC435647
Downstream genePtgs2, LOC676712, LOC100043257, LOC100043261, Pdc, BC003331, Tpr, EG625534
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-144B20.bB6Ng01-144B20.g
ACCDH941874DH941875
length1,1531,065
definitionDH941874|Mus musculus domesticus DNA, BAC clone: B6Ng01-144B20, 5' end.DH941875|Mus musculus domesticus DNA, BAC clone: B6Ng01-144B20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(151,682,972 - 151,684,130)(151,587,731 - 151,588,792)
sequence
gaattcagttggttcaagcctcccacaccatctcagtggagcaagacatg
gacttacacgtaagcaaacgtgcatgtggatcatcagaatggtttcgtct
ggcataaactggaataaaatgcaaagtcattaatctatcaaatcctaaaa
cagttttcaaccttgtggccagagtcactgtggcttaaggtgtattcttg
caatttgttttctgatctggtattggtctgaaaaggcctctgtgtgtcct
gcagcggggactcctgctgctcattctctgaggactctgtcctttccagt
gctgggcttctgctttggctcacattttgacagcagtctggctttttcat
tagcatcaattttctgcccttactcagtcctcccaaattcctttacaatg
aacactgctgtgatgcttttacagttagggaattttgtgggatttagatt
ttcttttccttattagaaacttagggtatagtgacttagactggtggacg
tgcggtatgtggtatacagagtctttggattcagacaaaattgtgtgtct
agtcattgctcagctgtctcctaactgggagaccttgaactggtaggtta
ttttcttcttttgtaggggaaacagtgatgcattttataggattaggggt
ctagttaaaataacttaaggacttaggatataataggaactcagaaaatt
gaaacagcaaatataatgaacaagttttagtttttatattcttttctgct
tataattataaattatgaactccataaaaaacagggacatttatcttctg
ggctctaggactagtgatcataattcctggcacttcacataaatatacaa
tgtattttcaggtatttatttttagaagccgttgactggttgaatataat
gagggcgaggataaaagttgccactggttgtagatggagttgttgaccat
gaagcgtgtttacagcacatatctgcccatgtaacatgtacactcagaag
ccatcactttgatctggagggagcgtgtattggaaggactgtttcaagta
cctgtgattggcttgttttcaattcttattagttatcaggtcagtaggca
aatcagacagattctggtactattataatcactcaggtcagtacttgcaa
gtg
gaattcagatggattgtcactattgctttgaggcactgcctaaacctaac
atattgaggttgttgttttggtagttgttgctgtttttgttgtcgttgtt
gctgctgctattgttgatatatttgttatggctgctgttattgttgtttt
tagtactcctctcctaaagtcttccaaaatgcatctcctacatctctcca
tgtagtaatctagtctccatgataacttcataagggtctccccaagtaac
agcctgactggggtgagttttgatggggttgtctaatgcatctgccctct
tcctccctggctttatcaacattacccacttttatttccaatcagagtag
ctagcaaggcctgaatatttgtccagctttggaacctgcatgacaaagat
aggagcaattaagtcaactgcttccagctgttcacctcaataggatttca
tgtccatggatctgaggtagagaaggagtaagacccaggagggtcccatc
aactgggatcatacgatgcactaaagaaaaatcttcacagcactgttcaa
cctgggtttcagtaaaagttccaccaatagagaacacccccatatagctc
aaaaaaggagatatcagtccatatcacgtatctttgttatcttctccaga
ttcccttaggttgggaatgctggttgccaattcctctgctaacagtgcta
acatcaagggtctatacctgccagttggagaacatctgtttcttctttgt
tcttcaccaggccctggcgttctggaacaacgtctcccttttctatctgt
accatcattttttcctccaatgagagacgaatctttaattgcgtatggcc
tcaaaagcttttatcatagggaatatcctatattcacggtctccttaaag
cacttcctactgagaaatagtgaccatactagctcaaattggacacaaac
ctagatacatctgagatggaggtattcttgagtaagaaaatgtctaacaa
tggcctgaaagtaagtctgtagggtgtttctagttcataggtgatgtgga
aggctccaaccactg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_151682972_151684130
seq2: B6Ng01-144B20.b_44_1196 (reverse)

seq1  CACTGGCAAGTACTGAACTGAGTGATTATAATAGTACCATAGAATCTGTC  50
      |||| ||||||||||| |||||||||||||||||||||  ||||||||||
seq2  CACTTGCAAGTACTGACCTGAGTGATTATAATAGTACC--AGAATCTGTC  48

seq1  TGAATTTGCCTACTGAACTGATAACTAAATAAGAATGGAAAACAAGCCAA  100
      || ||||||||||||| ||||||||| ||||||||| ||||||||||| |
seq2  TG-ATTTGCCTACTGACCTGATAACT-AATAAGAATTGAAAACAAGCC-A  95

seq1  ATCAACAGGTACTGTGAAACAGTCCTTCAAATACACGCTCCCTCCAGATC  150
      ||| ||||||||| |||||||||||||| |||||||||||||||||||||
seq2  ATC-ACAGGTACT-TGAAACAGTCCTTCCAATACACGCTCCCTCCAGATC  143

seq1  AAAGTGATGGCTTCTGAGTGTACATGTTACATGGGCAGATATGTGCTGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGATGGCTTCTGAGTGTACATGTTACATGGGCAGATATGTGCTGTA  193

seq1  AACACGCTTCATGGTCAACAACTCCATCTACAACCAGTGGCAACTTTTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACGCTTCATGGTCAACAACTCCATCTACAACCAGTGGCAACTTTTAT  243

seq1  CCTCGCCCTCATTATATTCAACCAGTCAACGGCTTCTAAAAATAAATACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCGCCCTCATTATATTCAACCAGTCAACGGCTTCTAAAAATAAATACC  293

seq1  TGAAAATACATTGTATATTTATGTGAAGTGCCAGGAATTATGATCACTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAATACATTGTATATTTATGTGAAGTGCCAGGAATTATGATCACTAG  343

seq1  TCCTAGAGCCCAGAAGATAAATGT-CCTGTTTTTTATGGAGTTCATAATT  399
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TCCTAGAGCCCAGAAGATAAATGTCCCTGTTTTTTATGGAGTTCATAATT  393

seq1  TATAATTATAAGCAGAAAAGAATATAAAAACTAAAACTTGTTCATTATAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATTATAAGCAGAAAAGAATATAAAAACTAAAACTTGTTCATTATAT  443

seq1  TTGCTGTTTCAATTTTCTGAGTTCCTATTATATCCTAAGTCCTTAAGTTA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGTTTCAATTTTCTGAGTTCCTATTATATCCTAAGTCCTTAAGTTA  493

seq1  TTTTAACTAGACCCCTAATCCTATAAAATGCATCACTGTTTCCCCTACAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAACTAGACCCCTAATCCTATAAAATGCATCACTGTTTCCCCTACAA  543

seq1  AAGAAGAAAATAACCTACCAGTTCAAGGTCTCCCAGTTAGGAGACAGCTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGAAAATAACCTACCAGTTCAAGGTCTCCCAGTTAGGAGACAGCTG  593

seq1  AGCAATGACTAGACACACAATTTTGTCTGAATCCAAAGACTCTGTATACC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATGACTAGACACACAATTTTGTCTGAATCCAAAGACTCTGTATACC  643

seq1  ACATACCGCACGTCCACCAGTCTAAGTCACTATACCCTAAGTTTCTAATA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACCGCACGTCCACCAGTCTAAGTCACTATACCCTAAGTTTCTAATA  693

seq1  AGGAAAAGAAAATCTAAATCCCACAAAATTCCCTAACTGTAAAAGCATCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAAGAAAATCTAAATCCCACAAAATTCCCTAACTGTAAAAGCATCA  743

seq1  CAGCAGTGTTCATTGTAAAGGAATTTGGGAGGACTGAGTAAGGGCAGAAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGTGTTCATTGTAAAGGAATTTGGGAGGACTGAGTAAGGGCAGAAA  793

seq1  ATTGATGCTAATGAAAAAGCCAGACTGCTGTCAAAATGTGAGCCAAAGCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATGCTAATGAAAAAGCCAGACTGCTGTCAAAATGTGAGCCAAAGCA  843

seq1  GAAGCCCAGCACTGGAAAGGACAGAGTCCTCAGAGAATGAGCAGCAGGAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCCAGCACTGGAAAGGACAGAGTCCTCAGAGAATGAGCAGCAGGAG  893

seq1  TCCCCGCTGCAGGACACACAGAGGCCTTTTCAGACCAATACCAGATCAGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCGCTGCAGGACACACAGAGGCCTTTTCAGACCAATACCAGATCAGA  943

seq1  AAACAAATTGCAAGAATACACCTTAAGCCACAGTGACTCTGGCCACAAGG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAATTGCAAGAATACACCTTAAGCCACAGTGACTCTGGCCACAAGG  993

seq1  TTGAAAACTGTTTTAGGATTTGATAGATTAATGACTTTGCATTTTATTCC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAACTGTTTTAGGATTTGATAGATTAATGACTTTGCATTTTATTCC  1043

seq1  AGTTTATGCCAGACGAAACCATTCTGATGATCCACATGCACGTTTGCTTA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTATGCCAGACGAAACCATTCTGATGATCCACATGCACGTTTGCTTA  1093

seq1  CGTGTAAGTCCATGTCTTGCTCCACTGAGATGGTGTGGGAGGCTTGAACC  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTAAGTCCATGTCTTGCTCCACTGAGATGGTGTGGGAGGCTTGAACC  1143

seq1  AACTGAATTC  1159
      ||||||||||
seq2  AACTGAATTC  1153

seq1: chr1_151587731_151588792
seq2: B6Ng01-144B20.g_67_1131

seq1  GAATTCAGATGGATTGTCACTATTGCTTTGAGGCACTGCCTAAACCTAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGATGGATTGTCACTATTGCTTTGAGGCACTGCCTAAACCTAAC  50

seq1  ATATTGAGGTTGTTGTTTTGGTAGTTGTTGCTGTTTTTGTTGTCGTTGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGAGGTTGTTGTTTTGGTAGTTGTTGCTGTTTTTGTTGTCGTTGTT  100

seq1  GCTGCTGCTATTGTTGATATATTTGTTATGGCTGCTGTTATTGTTGTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTGCTATTGTTGATATATTTGTTATGGCTGCTGTTATTGTTGTTTT  150

seq1  TAGTACTCCTCTCCTAAAGTCTTCCAAAATGCATCTCCTACATCTCTCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTACTCCTCTCCTAAAGTCTTCCAAAATGCATCTCCTACATCTCTCCA  200

seq1  TGTAGTAATCTAGTCTCCATGATAACTTCATAAGGGTCTCCCCAAGTAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTAATCTAGTCTCCATGATAACTTCATAAGGGTCTCCCCAAGTAAC  250

seq1  AGCCTGACTGGGGTGAGTTTTGATGGGGTTGTCTAATGCATCTGCCCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGACTGGGGTGAGTTTTGATGGGGTTGTCTAATGCATCTGCCCTCT  300

seq1  TCCTCCCTGGCTTTATCAACATTACCCACTTTTATTTCCAATCAGAGTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCCTGGCTTTATCAACATTACCCACTTTTATTTCCAATCAGAGTAG  350

seq1  CTAGCAAGGCCTGAATATTTGTCCAGCTTTGGAACCTGCATGACAAAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCAAGGCCTGAATATTTGTCCAGCTTTGGAACCTGCATGACAAAGAT  400

seq1  AGGAGCAATTAAGTCAACTGCTTCCAGCTGTTCACCTCAATAGGATTTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCAATTAAGTCAACTGCTTCCAGCTGTTCACCTCAATAGGATTTCA  450

seq1  TGTCCATGGATCTGAGGTAGAGAAGGAGTAAGACCCAGGAGGGTCCCATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCATGGATCTGAGGTAGAGAAGGAGTAAGACCCAGGAGGGTCCCATC  500

seq1  AACTGGGATCATACGATGCACTAAAGAAAAATCTTCACAGCACTGTTCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGGATCATACGATGCACTAAAGAAAAATCTTCACAGCACTGTTCAA  550

seq1  CCTGGGTTTCAGTAAAAGTTCCACCAATAGAGAACACCCCCATATAGCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGTTTCAGTAAAAGTTCCACCAATAGAGAACACCCCCATATAGCTC  600

seq1  AAAAAAGGAGATATCAGTCCATATCACGTATCTTTGTTATCTTCTCCAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGGAGATATCAGTCCATATCACGTATCTTTGTTATCTTCTCCAGA  650

seq1  TTCCCTTAGGTTGGGAATGCTGGTTGCCAATTCCTCTGCTAACAGTGCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTTAGGTTGGGAATGCTGGTTGCCAATTCCTCTGCTAACAGTGCTA  700

seq1  ACATCAAGGGTCTAATACCTGCCAGTTGGAGAACATCTGTTTCTTCTTTG  750
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  ACATCAAGGGTCT-ATACCTGCCAGTTGGAGAACATCTGTTTCTTCTTTG  749

seq1  TTCTTCACCAGGCCCTGGCGTTCTGGAACAACGTCTCCCTTTTCTATCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCACCAGGCCCTGGCGTTCTGGAACAACGTCTCCCTTTTCTATCTG  799

seq1  TACCATCA-TTTTTCCTCCAATGAGAGACGAATC-TTAATTGCGTATGGC  848
      |||||||| ||||||||||||||||||||||||| |||||||||||||||
seq2  TACCATCATTTTTTCCTCCAATGAGAGACGAATCTTTAATTGCGTATGGC  849

seq1  CTCAAAAGC-TTTATCATAGGGAATATCCTATATTCAC-GTCTCCTTAAA  896
      ||||||||| |||||||||||||||||||||||||||| |||||||||||
seq2  CTCAAAAGCTTTTATCATAGGGAATATCCTATATTCACGGTCTCCTTAAA  899

seq1  GCACTTCCTACTGAGAAATAGTGACCATACTAGCTCAAATT-GACACAAA  945
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GCACTTCCTACTGAGAAATAGTGACCATACTAGCTCAAATTGGACACAAA  949

seq1  CCTAGATACATCTGAGAT-GAGGTA-TCTTGAGTAAGAAAATGTCTAACA  993
      |||||||||||||||||| |||||| ||||||||||||||||||||||||
seq2  CCTAGATACATCTGAGATGGAGGTATTCTTGAGTAAGAAAATGTCTAACA  999

seq1  CTGGCCTGAAAGTAAGTCTGTAGGGTGTTTTCTTAGTTCATAGTTGATGT  1043
       |||||||||||||||||||||||||||||   |||||||||| ||||||
seq2  ATGGCCTGAAAGTAAGTCTGTAGGGTGTTT--CTAGTTCATAGGTGATGT  1047

seq1  GGAAGGGCTCCACCCACTG  1062
      |||| ||||||| ||||||
seq2  GGAA-GGCTCCAACCACTG  1065