BAC Information

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BAC

Clone NameB6Ng01-144F16
ChromosomeX (Build37)1 (Build37)
Map Location 142,733,902 - 142,734,350159,408,418 - 159,409,494
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLhfpl1, Amot, EG434860, LOC100039313, LOC623697, LOC623731, LOC237096, LOC100039558
Downstream geneEG666730, EG245663, Htr2c
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-144F16.bB6Ng01-144F16.g
ACCDH942053DH942054
length1,0141,072
definitionDH942053|Mus musculus domesticus DNA, BAC clone: B6Ng01-144F16, 5' end.DH942054|Mus musculus domesticus DNA, BAC clone: B6Ng01-144F16, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(142,733,902 - 142,734,350)(159,408,418 - 159,409,494)
sequence
gaattcacaccgacctgggctctcatagactggaaatgtactctagaatg
cacaatcagagcacatatgtggtctacctaaagacagactataactatgc
tatgctcagcagagcagagcataataggtagtggcaaattgggcctctgg
gcttctctggtactgtgactgacctgaatttcagaacgttctaggcacta
ctacaagcctatgacccagcctggatccctgctgtccataaacaacactg
ccaagcacttgttagccttagagtatcttatttactgaactgggtgaatc
catttaagcagtccagtgactcaatttgggccaacctgtgatttcagtga
catttctcagaaagatagacacaagttaattcagtagtccagacgttggg
attcagggacctctgaaaagtctcctacctcctaaagcaggggagaaggg
ttcggggaatcaacaagattctaagaaggtgttgttttactaagtgaagg
tgcttgaggacagaaaaaggcaagcttctgtctgaggtcactccctagtt
ctttaaaaagaaggcatacatttacacaatggagtactactcagctatta
aaaagaatgaatttatgaaattcctagccaaatggatggacctggagggc
atcatcctgagtgaggtaacacattcacaaaggaactcacacaatatgta
ctcactgataagtggatattagccctaaacctaggatacccaagatataa
gatacaatttgctaaacacatgaaactcaagaagaatgaagactgaagtg
tggacactatgcccctccttagaattgggaacaaaacacccatgaaagga
gttacagagacaaagtttggagctgagatgaaaggatggaccatctagag
actgccatatccagggatccaccccataatcagcttccaaacgctgacac
cattgcatacactagcaagattttatcgaaaggacccagatgtagctgtc
tcttgtgagactat
gaattctacatcttgattagaaggtagcagaaggagactgtgttccacag
gcagctaggagaggactagattccacactgggtggagcttgagcatagga
gacctcaaagccctcctccccagtgacacatttcctccagtaaggctaca
tatcctaatagtgccagacagcatgggccaagcattcaaacgcatgagtc
tgtgggaggccagatctattcaaattccagactgcatgtatgtctgcatc
acgtgcatgcttggtgcccacagaggacagaagagggcaccaacccctgt
gactagagtcatcacagatggttttagggtcccacgtgggttctagatat
tgaacccaggtcatctgaaagagcagccagtgcccttaatttttgagcta
tctctccaggccccataattttacatcctttaactttgtataattctttg
aaagttcatccagactaaatgcatcagtagttcagtcccttttgttgtgg
agtggtctctctctctctctctctttttaaagatttatttattatatgta
aatacactgtagctgtcttcagacactccagaagagggtgccagatcttg
ttacgaatggttgtggttgctgggaattgaactcaggaccttcagaagag
cagtcagtgttcttaaccgctgagccatctctccagccccttctttctct
ttttgagtggaaactttattctaaagaagccaagtgatgttttgttggat
ggatataccacagcctgtttattcagttgtcaattaatagacacgggatt
gttttcaggtttgacatgtacatattcgtgtatatttttgtagaaatatt
ggctttatttattttaggattgaaatttctaggatagatgctaagtgtac
attaatgttaaacacatttgcacagatacctgatggttttgttatttccc
ctcgtcctcatgggattcaactaatgcattagcaagattgaacatagggc
caggatttgatttcagtagcttaaatgggttgtttaaaaggaacttaaga
cagattctaaagagcggtccgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_142733902_142734350
seq2: B6Ng01-144F16.b_614_1061 (reverse)

seq1  ATAGTCTCACAAGAGACAGCTCTATCTGGGTCCTTTCAGCAAAATCTTGC  50
      |||||||||||||||||||||  ||||||||||||||   ||||||||||
seq2  ATAGTCTCACAAGAGACAGCTACATCTGGGTCCTTTCGATAAAATCTTGC  50

seq1  TAGTATATGCAATGGTGTCAGCGTTTGGAAGCTGATTATGGGATGGATCC  100
      |||| ||||||||||||||||||||||||||||||||||||| |||||||
seq2  TAGTGTATGCAATGGTGTCAGCGTTTGGAAGCTGATTATGGGGTGGATCC  100

seq1  CCGGATATGGCAGTCTCTAAATGGTCCATCCTTTCATCACAGCTCCAAAC  150
      | ||||||||||||||||| |||||||||||||||||| |||||||||||
seq2  CTGGATATGGCAGTCTCTAGATGGTCCATCCTTTCATCTCAGCTCCAAAC  150

seq1  TTTGTCTCTGTAACTCCTTCCATGGGTGTTTTGTTCCCAATTCTAAGAAG  200
      ||||||||||||||||||| ||||||||||||||||||||||||||| ||
seq2  TTTGTCTCTGTAACTCCTTTCATGGGTGTTTTGTTCCCAATTCTAAGGAG  200

seq1  GGGCAAAGTATCCACACTTTGGTCTTCGTTCTTCTTGAGTTTCATGTGTT  250
      ||||| ||| |||||||||  |||||| ||||||||||||||||||||||
seq2  GGGCATAGTGTCCACACTTCAGTCTTCATTCTTCTTGAGTTTCATGTGTT  250

seq1  TTGCAAATTATATCTTATATCTTGGGTATCCCAAGTTTTTGGGCTAAAAT  300
      | ||||||| ||||||||||||||||||| || || ||| ||||||| ||
seq2  TAGCAAATTGTATCTTATATCTTGGGTAT-CCTAGGTTTAGGGCTAATAT  299

seq1  CCACTTATCAGTGAGTACATGTTGTGTGAGTTCCTTTGTGATTGGGTTAC  350
      |||||||||||||||||||| |||||||||||||||||||| || |||||
seq2  CCACTTATCAGTGAGTACATATTGTGTGAGTTCCTTTGTGAATGTGTTAC  349

seq1  CTCACTCAGGATGATGCCCTCCAGGTCCATCCATTTGCCTAGGAATTTCA  400
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CTCACTCAGGATGATGCCCTCCAGGTCCATCCATTTGGCTAGGAATTTCA  399

seq1  TAAATTCATTCTTTTTAATAGCTGAGTAGTACTCCATTGTGTAAATGTA  449
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTCATTCTTTTTAATAGCTGAGTAGTACTCCATTGTGTAAATGTA  448

seq1: chr1_159408418_159409494
seq2: B6Ng01-144F16.g_69_1140

seq1  GAATTCTACATCTTGATTAGAAGGTAGCAGAAGGAGACTGTGTTCCACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACATCTTGATTAGAAGGTAGCAGAAGGAGACTGTGTTCCACAG  50

seq1  GCAGCTAGGAGAGGACTAGATTCCACACTGGGTGGAGCTTGAGCATAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTAGGAGAGGACTAGATTCCACACTGGGTGGAGCTTGAGCATAGGA  100

seq1  GACCTCAAAGCCCTCCTCCCCAGTGACACATTTCCTCCAGTAAGGCTACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTCAAAGCCCTCCTCCCCAGTGACACATTTCCTCCAGTAAGGCTACA  150

seq1  TATCCTAATAGTGCCAGACAGCATGGGCCAAGCATTCAAACGCATGAGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTAATAGTGCCAGACAGCATGGGCCAAGCATTCAAACGCATGAGTC  200

seq1  TGTGGGAGGCCAGATCTATTCAAATTCCAGACTGCATGTATGTCTGCATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGAGGCCAGATCTATTCAAATTCCAGACTGCATGTATGTCTGCATC  250

seq1  ACGTGCATGCTTGGTGCCCACAGAGGACAGAAGAGGGCACCAACCCCTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGCATGCTTGGTGCCCACAGAGGACAGAAGAGGGCACCAACCCCTGT  300

seq1  GACTAGAGTCATCACAGATGGTTTTAGGGTCCCACGTGGGTTCTAGATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAGAGTCATCACAGATGGTTTTAGGGTCCCACGTGGGTTCTAGATAT  350

seq1  TGAACCCAGGTCATCTGAAAGAGCAGCCAGTGCCCTTAATTTTTGAGCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCCAGGTCATCTGAAAGAGCAGCCAGTGCCCTTAATTTTTGAGCTA  400

seq1  TCTCTCCAGGCCCCATAATTTTACATCCTTTAACTTTGTATAATTCTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCCAGGCCCCATAATTTTACATCCTTTAACTTTGTATAATTCTTTG  450

seq1  AAAGTTCATCCAGACTAAATGCATCAGTAGTTCAGTCCCTTTTGTTGTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTCATCCAGACTAAATGCATCAGTAGTTCAGTCCCTTTTGTTGTGG  500

seq1  AGTGGTCTCTCTCTCTCTCTCTCTTTTTAAAGATTTATTTATTATATGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTCTCTCTCTCTCTCTCTCTTTTTAAAGATTTATTTATTATATGTA  550

seq1  AATACACTGTAGCTGTCTTCAGACACTCCAGAAGAGGGTGCCAGATCTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACACTGTAGCTGTCTTCAGACACTCCAGAAGAGGGTGCCAGATCTTG  600

seq1  TTACGAATGGTTGTGGTTGCTGGGAATTGAACTCAGGACCTTCAGAAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACGAATGGTTGTGGTTGCTGGGAATTGAACTCAGGACCTTCAGAAGAG  650

seq1  CAGTCAGTGTTCTTAACCGCTGAGCCATCTCTCCAGCCCCTTCTTTCTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCAGTGTTCTTAACCGCTGAGCCATCTCTCCAGCCCCTTCTTTCTCT  700

seq1  TTTTGAGTGGAAACTTTATTCTAAAGAAGCCAAGTGATGTTTTGTTGGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAGTGGAAACTTTATTCTAAAGAAGCCAAGTGATGTTTTGTTGGAT  750

seq1  GGATATACCACAGCCTGTTTATTCAGTTGTCAATTAATAGACACGGGATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATACCACAGCCTGTTTATTCAGTTGTCAATTAATAGACACGGGATT  800

seq1  GTTTTCAGGTTTGACATGTACATATTCGTGTATATTTTTGTAGAAATA-T  849
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GTTTTCAGGTTTGACATGTACATATTCGTGTATATTTTTGTAGAAATATT  850

seq1  GGCTTTATTTATTTTAGGATTGAAATTTCTAGGATAGATGCTAAGTGTAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTATTTATTTTAGGATTGAAATTTCTAGGATAGATGCTAAGTGTAC  900

seq1  ATTTAATGTTAAAACACATTTGCACAGATACCTGATTGGTTTTGTTATTT  949
      | |||||||| |||||||||||||||||||||||| ||||||||||||||
seq2  A-TTAATGTT-AAACACATTTGCACAGATACCTGA-TGGTTTTGTTATTT  947

seq1  CCCCTCGTCTCCATGGTATCCAACTAATGTCATTAAGCAAGAATG-ACAT  998
      |||||||||  ||||| || ||||||||| |||| ||||||| || ||||
seq2  CCCCTCGTCCTCATGGGATTCAACTAATG-CATT-AGCAAGATTGAACAT  995

seq1  AGGGCCAGAATTTGATTTCAGTAGCTTTAAATGGTTTGTTTAAAAGGAAC  1048
      |||||||| |||||||||||||||| |||||||| |||||||||||||||
seq2  AGGGCCAGGATTTGATTTCAGTAGC-TTAAATGGGTTGTTTAAAAGGAAC  1044

seq1  TTATGTACAG-TTCTAAAAGGAGCGG-CCGT  1077
      ||| | |||| |||||||  |||||| ||||
seq2  TTAAG-ACAGATTCTAAA--GAGCGGTCCGT  1072