BAC Information

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BAC

Clone NameB6Ng01-144L14
Chromosome3 (Build37)1 (Build37)
Map Location 41,059,203 - 41,059,737129,363,096 - 129,364,248
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2
Downstream geneEG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-144L14.bB6Ng01-144L14.g
ACCDH942325DH942326
length1,0221,142
definitionDH942325|Mus musculus domesticus DNA, BAC clone: B6Ng01-144L14, 5' end.DH942326|Mus musculus domesticus DNA, BAC clone: B6Ng01-144L14, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(41,059,203 - 41,059,737)(129,363,096 - 129,364,248)
sequence
gaattctttgtttagctctgagccccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatattggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttagtgacct
ttttgccttattgacagtgtcttttgccttgcagaagctttgcaatttta
tgaggtcccatttgtcgattctcgatcttacagcacaagccattgctgtt
ctagtcagcaatttttcccctgtgcccatatcttcgaggcttttccgcac
tttctcctctataagtttcagagtctctggttttatgtggagttccttaa
tccacttagatttgaccttagtacaaggagataggaatggatcaattcgc
attcttctacatgataactgccagttgtgccagcaccatttgttgaaaat
gttttctttttttccactggatggttttagctcccttgtcaaagatcaag
tgaccataggtgtgtggtttcatttctgggtcttcaattttattccattg
gtctacttgtctgtcactataccagtaccatgcagtttttatcacaattg
ctctgtagtaaagctttaggtcaggcacggtgattccaacagaggttctt
ttatccttgagaagagtttttgctatcctaggttttttgttattccagat
gaatttggagattgccctttccaattcgttgaagaattgagttggaattt
tgatgggaattgcattgaatctgtagattgctttggcaagatagccatct
ttactatattgatcctgccaatccatgagcatgggagagctttccatctt
tctgagatctttcttgaagttcttatcatacagatcttttcacttcctta
gttagagtcatgccaagggtatttttaatatatttatgattatcgagaag
gtgttgctttcctttaatttctttctcagcctgtttatcctttgtgtaga
gaaaggccattgacttgtttga
gaattcccacccagcatatgagaggcactgggttccagccccagccctgc
ctaaccctgtcccccctgcgctctggaggtggaggtaggcacatcagaag
ttggaggttacgctcacctatggaatgagttggcagcggcagcctggggg
tacattagatattagccgttttaagaagacatttcctggggctggtgaga
tggctcagcgagcaagagcactgattgctcttccaaaggtcctgagttca
aatcccagcaaccacatggtggctcataaccatccgtaatgaggtctgac
gccctcttctggtgcatctgaagacagctacagtgcacttacactgtaaa
tcaatcaatcaatcaatcaatcattgggccggagcaactggggccagagc
aggcagaggtcctaaattcaattcccaacaaccagatgaaggctcacaac
tacctgtacagctacagtgtgtactcatatacataaaaaaattaaataaa
tcttaaaaaagaagacatttcctgatctgtatggtgtatgctaattacac
tcctggacagctcagtgggtactctcaaatagtctcagagaactccattc
caatgagtccacacgaaatcccagcaaggcatttaaaggctctctgggct
ggtaatggagtagatggtaaagaccatcttgatatagtcagggccctatg
ttcaaaatcagtatcaatctatcaacgaaagttcccttggaaaatgacaa
gtcttctatgtgtacaccagcctgatggtattactatgtgtccctggtcc
tcacctaaaatacctctacaaatatagaacaggttcttgtgtccactgct
gcctctgtgtgagaagaaagcgcaggcgtagacttccgacaagcccagag
tagcccagagacatgcttgcttgcttgctttggctgagcttttggttttg
taatgcaagcttctatagtcccactggcttcaacacactgtgcataaggt
gacttaactgcatcttccctggtcttctgccttaacgctggatgctggga
ttacagcacacaccacattctgtttaatacagttctgcatggaaccttgg
cctcttgtgttcgtggttcagcacagatggtagagtatcctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41059203_41059737
seq2: B6Ng01-144L14.b_45_581 (reverse)

seq1  ATTGAAGACTCAGAAACGAATCCACACACCTATGGTCACTTGATCTTCGA  50
      ||||||||| |||||| ||| |||||||||||||||||||||||||| ||
seq2  ATTGAAGACCCAGAAATGAAACCACACACCTATGGTCACTTGATCTTTGA  50

seq1  CAAGGGAGCTAAAACCATCCAGTGG-AAAAAAGACAGCATTTTCAACAAA  99
      ||||||||||||||||||||||||| |||||||| | |||||||||||||
seq2  CAAGGGAGCTAAAACCATCCAGTGGAAAAAAAGAAAACATTTTCAACAAA  100

seq1  TGGTGCTGGCACAACTGGTTGTTATCATGTAGAAGAATGCGAATTGATCC  149
      ||||||||||||||||||  ||||||||||||||||||||||||||||||
seq2  TGGTGCTGGCACAACTGGCAGTTATCATGTAGAAGAATGCGAATTGATCC  150

seq1  ACTCCTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACGCC  199
      | ||||||||||||||||||||||||||||||||||||| ||||||| ||
seq2  ATTCCTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATTAAGGAACTCC  200

seq1  ACATAAAACCAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGC  249
      |||||||||||||||| |||||||||||||||||||||||| ||||||||
seq2  ACATAAAACCAGAGACTCTGAAACTTATAGAGGAGAAAGTGCGGAAAAGC  250

seq1  CTTGAAGATATGGTCACAGGGGAAAAATTCCTGCATAGAACAGCAATGGC  299
      || |||||||||| ||||||||||||||| |||  |||||||||||||||
seq2  CTCGAAGATATGGGCACAGGGGAAAAATTGCTGACTAGAACAGCAATGGC  300

seq1  TTGTGCTGTAAGATTGAGAATAGACAAATGGGACCTCATGAAACTGCAAA  349
      |||||||||||||| |||||| ||||||||||||||||| ||| ||||||
seq2  TTGTGCTGTAAGATCGAGAATCGACAAATGGGACCTCATAAAATTGCAAA  350

seq1  GCTTCTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAGG-CACCAACA  398
      |||||||||||||||||||||| ||||||||| |||||||| ||| ||||
seq2  GCTTCTGCAAGGCAAAAGACACTGTCAATAAGGCAAAAAGGTCACTAACA  400

seq1  GATTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATC  450

seq1  CAATATATATCAAGAACTCAAGAAGGTGGATTCCAGAAAATCAAATAACC  498
      |||||||||| ||||||||||||||||||| |||||||||||||||||||
seq2  CAATATATATAAAGAACTCAAGAAGGTGGACTCCAGAAAATCAAATAACC  500

seq1  CCATTAAAAAATGGGGCTCAGAGCTAAACAAAGAATT  535
      |||||||||||||||||||||||||||||||||||||
seq2  CCATTAAAAAATGGGGCTCAGAGCTAAACAAAGAATT  537

seq1: chr1_129363096_129364248
seq2: B6Ng01-144L14.g_69_1210

seq1  GAATTCCCACCCAGCATATGAGAGGCACTGGGTTCCAGCCCCAGCCCTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCACCCAGCATATGAGAGGCACTGGGTTCCAGCCCCAGCCCTGC  50

seq1  CTAACCCTGTCCCCCCTGCGCTCTGGAGGTGGAGGTAGGCACATCAGAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACCCTGTCCCCCCTGCGCTCTGGAGGTGGAGGTAGGCACATCAGAAG  100

seq1  TTGGAGGTTACGCTCACCTATGGAATGAGTTGGCAGCGGCAGCCTGGGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGGTTACGCTCACCTATGGAATGAGTTGGCAGCGGCAGCCTGGGGG  150

seq1  TACATTAGATATTAGCCGTTTTAAGAAGACATTTCCTGGGGCTGGTGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTAGATATTAGCCGTTTTAAGAAGACATTTCCTGGGGCTGGTGAGA  200

seq1  TGGCTCAGCGAGCAAGAGCACTGATTGCTCTTCCAAAGGTCCTGAGTTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCAGCGAGCAAGAGCACTGATTGCTCTTCCAAAGGTCCTGAGTTCA  250

seq1  AATCCCAGCAACCACATGGTGGCTCATAACCATCCGTAATGAGGTCTGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCAGCAACCACATGGTGGCTCATAACCATCCGTAATGAGGTCTGAC  300

seq1  GCCCTCTTCTGGTGCATCTGAAGACAGCTACAGTGCACTTACACTGTAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTCTTCTGGTGCATCTGAAGACAGCTACAGTGCACTTACACTGTAAA  350

seq1  TCAATCAATCAATCAATCAATCATTGGGCCGGAGCAACTGGGGCCAGAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATCAATCAATCAATCAATCATTGGGCCGGAGCAACTGGGGCCAGAGC  400

seq1  AGGCAGAGGTCCTAAATTCAATTCCCAACAACCAGATGAAGGCTCACAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGAGGTCCTAAATTCAATTCCCAACAACCAGATGAAGGCTCACAAC  450

seq1  TACCTGTACAGCTACAGTGTGTACTCATATACATAAAAAAATTAAATAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTGTACAGCTACAGTGTGTACTCATATACATAAAAAAATTAAATAAA  500

seq1  TCTTAAAAAAGAAGACATTTCCTGATCTGTATGGTGTATGCTAATTACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAAAAAAGAAGACATTTCCTGATCTGTATGGTGTATGCTAATTACAC  550

seq1  TCCTGGACAGCTCAGTGGGTACTCTCAAATAGTCTCAGAGAACTCCATTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGACAGCTCAGTGGGTACTCTCAAATAGTCTCAGAGAACTCCATTC  600

seq1  CAATGAGTCCACACGAAATCCCAGCAAGGCATTTAAAGGCTCTCTGGGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGAGTCCACACGAAATCCCAGCAAGGCATTTAAAGGCTCTCTGGGCT  650

seq1  GGTAATGGAGTAGATGGTAAAGACCATCTTGATATAGTCAGGGCCCTATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAATGGAGTAGATGGTAAAGACCATCTTGATATAGTCAGGGCCCTATG  700

seq1  TTCAAAATCAGTATCAATCTATCAACGAAAGTT-CCTTGGAAAATGACAA  749
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTCAAAATCAGTATCAATCTATCAACGAAAGTTCCCTTGGAAAATGACAA  750

seq1  GTCTTCTATGTGTACACCAGCCTGATGGTATTACTATGTGTCCCTGGTCC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCTATGTGTACACCAGCCTGATGGTATTACTATGTGTCCCTGGTCC  800

seq1  TCACCTAAAATACCTCTACAAATATAGAACAGGTTCTTGTGTCCACTGCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTAAAATACCTCTACAAATATAGAACAGGTTCTTGTGTCCACTGCT  850

seq1  GCCTCTGTGTGAGAAGAAAGCGCAGGCGTAGACTTCCGACAAGCCCAGAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTGTGTGAGAAGAAAGCGCAGGCGTAGACTTCCGACAAGCCCAGAG  900

seq1  TAGCCAAGAGACATGCTTGCTTGCTTGCTTTGGCTGAGCTTTTGGTTTTG  949
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCCAGAGACATGCTTGCTTGCTTGCTTTGGCTGAGCTTTTGGTTTTG  950

seq1  TAATGCAAGGCCTTCTATAGTCCACACTGGCTTCAAACACACTGTGCATA  999
      |||||||||  |||||||||||| |||||||||| |||||||||||||||
seq2  TAATGCAAG--CTTCTATAGTCC-CACTGGCTTC-AACACACTGTGCATA  996

seq1  AGGGTGACTTAACTGCATCTTCCCTGGTCTTCCTGCCCTTACCGCCTGAG  1049
      | ||||||||||||||||||||||||||||| ||| ||||| || |||  
seq2  A-GGTGACTTAACTGCATCTTCCCTGGTCTT-CTG-CCTTAACG-CTGGA  1042

seq1  TGCTGGGATTACAGGCACACACCACCATCCTGGTTTTATACAGTTCTGCA  1099
      ||||||||||||| |||||||||| ||| || |||| |||||||||||| 
seq2  TGCTGGGATTACA-GCACACACCA-CATTCT-GTTTAATACAGTTCTGC-  1088

seq1  ATGGACCCTGGGCCTC-TGTGTCTGTGGGTCAGGCACAGTATGGTAGAGT  1148
      ||||| ||| |||||| |||||  |||| ||| |||||| ||||||||||
seq2  ATGGAACCTTGGCCTCTTGTGTTCGTGGTTCA-GCACAG-ATGGTAGAGT  1136

seq1  A-CCTC  1153
      | ||||
seq2  ATCCTC  1142