BAC Information

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BAC

Clone NameB6Ng01-146B12
Chromosome1 (Build37)
Map Location 72,922,862 - 73,105,189
singlet/doubletdoublet
Overlap geneLOC672187, LOC100042860, Tnp1, 1700027A15Rik
Upstream geneEG667931, EG433319, LOC667937, LOC100043255, Mreg, Pecr, Tmem169, Xrcc5, March4, Smarcal1, Ankar, Rpl37a, Igfbp2, Igfbp5
Downstream genePinc, LOC672208, LOC100043291, Tns1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-146B12.bB6Ng01-146B12.g
ACCDH943326DH943327
length1,202712
definitionDH943326|Mus musculus domesticus DNA, BAC clone: B6Ng01-146B12, 5' end.DH943327|Mus musculus domesticus DNA, BAC clone: B6Ng01-146B12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(73,103,972 - 73,105,189)(72,922,862 - 72,923,571)
sequence
gaattcacatcctttatcagacagttaaactaatatataatattatatat
tatgataatatataatatataatagctatattaatctgaggacaactcct
atgccttgccttacaattttgagtaaaacttatctgtgacaagaaaagaa
aacactgtcaaaattctaggagggttaattcaacaatggccatccaagat
gacctactttatcctatcctggagacagttgtcttcctggtgccctctat
ggaataaagtctctctttagtcctttattatgactgaatatcatcaaggt
gtggccagaggaagagctagagactcagaacttcattgagaaagctgatt
aatcctaatcctggtggtccttccccatgaccaatgtcctgcagaacaat
gcaaacagacaatgtggtgggagatcttagagatgtgagaggaaaaccct
catttcacctttctaccctcatctggcctctctctggcagcctcctgggt
ctgcaagaaagtacttcggctcattctaacttctacaccattcacagtat
agcagaaaggcccaactgtgagcaaataactcatggtaaggttaagtttg
cttgaggctgagacatcaaacttctctagaagtgattctcccagcatcct
ttatcagatgattcactgctgaccactgaacagattcacagctccagagt
gacggaaaacttctttgtctttctggtacactgacatgatgcccaaggtc
tttcttctcaagggcacagaatgcacagaatgagtttctgctccatctat
taaactctgcagagtgccaaaagattctaggtaactccaaagtggtttat
ggttacaaggcccactactacaccatgataccctgattatactaacaata
tctcatgtaattcttgtaatccatgtaataccctatggtgggagaccttg
aagctacataaggtcacacacacaaggagctgaactgaaactggtactaa
gtagtcatctttcttatctgctactcactgagactcatgaaattccacaa
cctcttcattattctactaggattgttttcttctttgggtagacaaactg
tagtttacaggtgagacattttaaagcaggctctctagatgacatgttct
ccaaactctaggcatctgatctgttgacagtcctatggatacctttatct
cc
gaattcttgctggaggactgcaatattgagaaaatatttcccttgctggc
tccatttgggagcatctccccgggcgctgttcacactcccagattctgat
ccagattctcggttctctgccaataggcacattttaagacaggaccaaat
cttaaaggtgtccttttacacccattgccagggcagttttattgtgttgg
tggctagcagagggaagaagagctgtgtgcaccaatgtacccccacaccc
cccaaaaaggcaggagggttggttggttccaagagcctgtctctgctgtt
ggagggcttgggaaagcagggagcaacttaacattagaaactgggttgca
ttattttagaaggggaagagatcaagtgttattttcttatttaagttaac
ttcaggagggaagagtgttagaaaggggcatggtgtggggatgggctcag
ctcaccctggtgtagcatttgaaacgagaaatctagggtggttcttctgt
ccggtttctcaagagttgcccagtactctcaaaatatagcctctagaagt
aaattttgttctagctgacttcttgtggctaagtacagtgtgtaaggacc
agtaagagaaggagagggctcatagagaagagaggtgggcagggagaaga
gaagtgagagagtgggaaattggtcctccaagggtgatggtggggtcatg
ggggagagatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_73103972_73105189
seq2: B6Ng01-146B12.b_48_1249 (reverse)

seq1  GGAGAGTAAAGGTCTCCTTAGGACTGTCAGACAGATCAGATGCCTGAGA-  49
      ||||| ||||||| ||| ||||||||||| ||||||||||||||| ||| 
seq2  GGAGA-TAAAGGTATCCATAGGACTGTCA-ACAGATCAGATGCCT-AGAG  47

seq1  TTGGGAGAACATAGTCATCTTAGAGAAAGCTTGCTTTTAAAAATGTCTCA  99
      || ||||||||| |||||||   ||| ||| ||||||  |||||||||||
seq2  TTTGGAGAACAT-GTCATCT---AGAGAGCCTGCTTT--AAAATGTCTCA  91

seq1  CTTGTAAACTACAGTTTGTCTTACCCCAAAGGAAGAAAACATTCCTAGTA  149
      | |||||||||||||||||| |||||  || |||||||||| ||||||||
seq2  CCTGTAAACTACAGTTTGTC-TACCC--AAAGAAGAAAACAATCCTAGTA  138

seq1  GAATTTATTGAGA-GTTGTGGAATTTCATGAGTCCTCAGTGAGTAGCAGA  198
      ||| | ||  ||| ||||||||||||||||||| ||||||||||||||||
seq2  GAA-TAATGAAGAGGTTGTGGAATTTCATGAGT-CTCAGTGAGTAGCAGA  186

seq1  TAAGAAAGATGGACTACTTTAGTACCAGTTTCAGTTCAGCTCCTTGTGTG  248
      |||||||||| |||||| ||||||||||||||||||||||||||||||||
seq2  TAAGAAAGAT-GACTAC-TTAGTACCAGTTTCAGTTCAGCTCCTTGTGTG  234

seq1  TGTGACCTTATGTAAGCTTCAAGGTCTCCCA-CATAGGGTTATTACATGG  297
      ||||||||||||| ||||||||||||||||| ||||||| ||||||||||
seq2  TGTGACCTTATGT-AGCTTCAAGGTCTCCCACCATAGGG-TATTACATGG  282

seq1  ATTACAAGAATTACATGAGATAATTGTTAGTATAATCAGGGTATCATGGT  347
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ATTACAAGAATTACATGAGAT-ATTGTTAGTATAATCAGGGTATCATGGT  331

seq1  GTAGTAGTGGGCCTTGTAACCATAAACCACTTTGGAGTTACCTAGAATCT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTAGTGGGCCTTGTAACCATAAACCACTTTGGAGTTACCTAGAATCT  381

seq1  TTTGGCACTCTGCAGAGTTTAATAGATGGAGCAGAAACTCATTCTGTGCA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCACTCTGCAGAGTTTAATAGATGGAGCAGAAACTCATTCTGTGCA  431

seq1  TTCTGTGCCCTTGAGAAGAAAGACCTTGGGCATCATGTCAGTGTACCAGA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTGCCCTTGAGAAGAAAGACCTTGGGCATCATGTCAGTGTACCAGA  481

seq1  AAGACAAAGAAGTTTTCCGTCACTCTGGAGCTGTGAATCTGTTCAGTGGT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAAAGAAGTTTTCCGTCACTCTGGAGCTGTGAATCTGTTCAGTGGT  531

seq1  CAGCAGTGAATCATCTGATAAAGGATGCTGGGAGAATCACTTCTAGAGAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGTGAATCATCTGATAAAGGATGCTGGGAGAATCACTTCTAGAGAA  581

seq1  GTTTGATGTCTCAGCCTCAAGCAAACTTAACCTTACCATGAGTTATTTGC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGATGTCTCAGCCTCAAGCAAACTTAACCTTACCATGAGTTATTTGC  631

seq1  TCACAGTTGGGCCTTTCTGCTATACTGTGAATGGTGTAGAAGTTAGAATG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGTTGGGCCTTTCTGCTATACTGTGAATGGTGTAGAAGTTAGAATG  681

seq1  AGCCGAAGTACTTTCTTGCAGACCCAGGAGGCTGCCAGAGAGAGGCCAGA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCGAAGTACTTTCTTGCAGACCCAGGAGGCTGCCAGAGAGAGGCCAGA  731

seq1  TGAGGGTAGAAAGGTGAAATGAGGGTTTTCCTCTCACATCTCTAAGATCT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGTAGAAAGGTGAAATGAGGGTTTTCCTCTCACATCTCTAAGATCT  781

seq1  CCCACCACATTGTCTGTTTGCATTGTTCTGCAGGACATTGGTCATGGGGA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCACATTGTCTGTTTGCATTGTTCTGCAGGACATTGGTCATGGGGA  831

seq1  AGGACCACCAGGATTAGGATTAATCAGCTTTCTCAATGAAGTTCTGAGTC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACCACCAGGATTAGGATTAATCAGCTTTCTCAATGAAGTTCTGAGTC  881

seq1  TCTAGCTCTTCCTCTGGCCACACCTTGATGATATTCAGTCATAATAAAGG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGCTCTTCCTCTGGCCACACCTTGATGATATTCAGTCATAATAAAGG  931

seq1  ACTAAAGAGAGACTTTATTCCATAGAGGGCACCAGGAAGACAACTGTCTC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAAGAGAGACTTTATTCCATAGAGGGCACCAGGAAGACAACTGTCTC  981

seq1  CAGGATAGGATAAAGTAGGTCATCTTGGATGGCCATTGTTGAATTAACCC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATAGGATAAAGTAGGTCATCTTGGATGGCCATTGTTGAATTAACCC  1031

seq1  TCCTAGAATTTTGACAGTGTTTTCTTTTCTTGTCACAGATAAGTTTTACT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGAATTTTGACAGTGTTTTCTTTTCTTGTCACAGATAAGTTTTACT  1081

seq1  CAAAATTGTAAGGCAAGGCATAGGAGTTGTCCTCAGATTAATATAGCTAT  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATTGTAAGGCAAGGCATAGGAGTTGTCCTCAGATTAATATAGCTAT  1131

seq1  TATATATTATATATTATCATAATATATAATATTATATATTAGTTTAACTG  1197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATTATATATTATCATAATATATAATATTATATATTAGTTTAACTG  1181

seq1  TCTGATAAAGGATGTGAATTC  1218
      |||||||||||||||||||||
seq2  TCTGATAAAGGATGTGAATTC  1202

seq1: chr1_72922862_72923571
seq2: B6Ng01-146B12.g_70_780

seq1  GAATTCTTGCTGGAGGACTGCAATATTGAGAAAATATTTCCCTTGCTGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGCTGGAGGACTGCAATATTGAGAAAATATTTCCCTTGCTGGC  50

seq1  TCCATTTGGGAGCATCTCCCCGGGCGCTGTTCACACTCCCAGATTCTGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTTGGGAGCATCTCCCCGGGCGCTGTTCACACTCCCAGATTCTGAT  100

seq1  CCAGATTCTCGGTTCTCTGCCAATAGGCACATTTTAAGACAGGACCAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATTCTCGGTTCTCTGCCAATAGGCACATTTTAAGACAGGACCAAAT  150

seq1  CTTAAAGGTGTCCTTTTACACCCATTGCCAGGGCAGTTTTATTGTGTTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAGGTGTCCTTTTACACCCATTGCCAGGGCAGTTTTATTGTGTTGG  200

seq1  TGGCTAGCAGAGGGAAGAAGAGCTGTGTGCACCAATGTACCCCCACACCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTAGCAGAGGGAAGAAGAGCTGTGTGCACCAATGTACCCCCACACCC  250

seq1  CCCAAAAAGGCAGGAGGGTTGGTTGGTTCCAAGAGCCTGTCTCTGCTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAAAAGGCAGGAGGGTTGGTTGGTTCCAAGAGCCTGTCTCTGCTGTT  300

seq1  GGAGGGCTTGGGAAAGCAGGGAGCAACTTAACATTAGAAACTGGGTTGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGCTTGGGAAAGCAGGGAGCAACTTAACATTAGAAACTGGGTTGCA  350

seq1  TTATTTTAGAAGGGGAAGAGATCAAGTGTTATTTTCTTATTTAAGTTAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTAGAAGGGGAAGAGATCAAGTGTTATTTTCTTATTTAAGTTAAC  400

seq1  TTCAGGAGGGAAGAGTGTTAGAAAGGGGCATGGTGTGGGGATGGGCTCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGAGGGAAGAGTGTTAGAAAGGGGCATGGTGTGGGGATGGGCTCAG  450

seq1  CTCACCCTGGTGTAGCATTTGAAACGAGAAATCTAGGGTGGTTCTTCTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCCTGGTGTAGCATTTGAAACGAGAAATCTAGGGTGGTTCTTCTGT  500

seq1  CCGGTTTCTCAAGAGTTGCCCAGTACTCTCAAAATATAGCCTCTAGAAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGTTTCTCAAGAGTTGCCCAGTACTCTCAAAATATAGCCTCTAGAAGT  550

seq1  AAATTTTGTTCTAGCTGACTTCTTGTGGCTAAGTACAGTGTGTAAGGACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTGTTCTAGCTGACTTCTTGTGGCTAAGTACAGTGTGTAAGGACC  600

seq1  AGTAAGAGAAGGAGAGGGCTCATAGAGAAGAGAGGTGGGCAGGGAGAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGAGAAGGAGAGGGCTCATAGAGAAGAGAGGTGGGCAGGGAGAAGA  650

seq1  GAAGTGAGAGAGTGGGAAATTGGTCCTCGAAGGGTGATGGTGGGGTCAT-  699
      |||||||||||||||||||||||||||| |||||||||||||||||||| 
seq2  GAAGTGAGAGAGTGGGAAATTGGTCCTCCAAGGGTGATGGTGGGGTCATG  700

seq1  GGGGAGAGATC  710
      |||||||||||
seq2  GGGGAGAGATC  711