BAC Information

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BAC

Clone NameB6Ng01-146F22
Chromosome1 (Build37)
Map Location 31,217,346 - 31,392,918
singlet/doubletdoublet
Overlap gene4931428L18Rik, LOC666020, Gluld1, 4930521A18Rik, EG226957, EG624262
Upstream geneEG624138, LOC100040699, Phf3, EG638995, Ptp4a1, EG435615, LOC669402, EG435616
Downstream geneLOC624275, LOC666056, LOC100041238, Khdrbs2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-146F22.bB6Ng01-146F22.g
ACCDH943532DH943533
length1,1491,082
definitionDH943532|Mus musculus domesticus DNA, BAC clone: B6Ng01-146F22, 5' end.DH943533|Mus musculus domesticus DNA, BAC clone: B6Ng01-146F22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(31,391,766 - 31,392,918)(31,217,346 - 31,218,232)
sequence
gaattctctgacctgttaactttgggggaaaataatgaccctgggacatt
tttaaatactaggaagaaaatgaaggacacaatattcctgtctgtttaac
acagatatagcacgttgtgccaagccttgcatctgaacaccttgaaagca
ctaaatcatttgaatcagaggctctaatatttcaccttcaatagcaaaca
ccacagctgggctcctcttgcctgcctgttctatcacttggtgtgggaat
ccggagcttcgctatctccagggcaacactcttcccttcccaagctcttc
cttcacttactacactgtagcttcctgaactctgctcatccatctccact
tttccttggagtcccattatctaagcactgtggtgtccaagtgagccctt
tgggccaatttcttgacacgcctactctcttagacactcccactctctta
gacactcccactctcttagaaatcctgtgtattcactcgaactcgtttga
cctccaacttacatccagaaaagaaacttgtcctttgaactgcagcctta
ttcagtatcctcctagacatctcagattagactgatgggtaacaaagatt
ttaataataatggatacaaagctgagcttttcaccttttccctactttgg
agtcttccccagtctcagcaaagctacctttgttctctaggttgcctctc
caaatactttgtaattatcctggctgtctgcttttcacatgactcatctc
atctatcaggaaattctatggctgtagtttcaacggacttagatcccaat
cccttcaaaaatcaggtctcttccacctacctctgtacagactggctttg
cttgtcaacttaacacaatctggagttatcacagaaaaggagcctccctt
gagaaaatgtcttcatgagatccagctgtaaggcattttctcaattagtg
atcaggatgggagagctcattgtggggtggtgccatccctgggctggtag
tctgagtcaatgtggaagtatagccaaataaaccctttccttccaaactt
gcttcttggtcatgatgtttttgtgcaggaaagaactctgagtaagacca
cctctccatctagattaattacaataggttctctctccagggtgttctt
gaattcttctttaatgacatgtattggtctgccttacatgcgtagttgag
ctgcatttgttaggactccatagagaaaagcatcaaaaaaattctgttgg
tgtgctgtggctttttgtcttttctgtggacttggttcaattggcagagt
gatgtcagctgagaagctcacatgcttaggccagatgtggtgagtcaagt
tcggtggagggcatgtgatgtttggagggactataaataggactcaatgg
actgtgagaggggcttgctggtagagctagctttgcagtgcttgttggtc
ttgagtcttcactgatcttcatgtctctgagagaggcacagctaagaact
tctgtcatccctgttggtcctaatggctcctccagactcatgccaattca
gcagaggcctggctgtctctgttagtttgtgctactgctgctgatatcct
gatactactgaactagattgctggtatatctgtgaagtgttttcgagtgg
atagagctgctgctgctaacctgtgaactgaaatttcctgacaacacaga
tgggatttgctccaaagaaccatttctaaacaggtctacttccccagtat
cctttcgtttccactacctatggtgggtgatgggcaagaagggaggttaa
aatgtttaagaaccatcattagaagcaggctttgaaaaaaattaaagtta
aagagtttaatggaataagcaaaggagtgtgtctttatgagttctattgt
atgacattaatattcatgacaactcgggaaggaaaaggtttatttggctt
tataatgccctgggtcacacttcatactaaggggaattggaacagaaacc
tggaaagcaaaaactgaagcagaggccatggagaaatgctccttctgggc
ttctacctcctggtttgctcactttaatttcttgacaactcaggaccagg
tttgttcaggtttggcacaccattcatgaggtggattctttcacatcact
tgtcaatcaagaaaatgtccacctgtttgtctaacagcccattcttatgg
ggtatttttcttttttaaaaaaaatgatttat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_31391766_31392918
seq2: B6Ng01-146F22.b_43_1191 (reverse)

seq1  AAGAACAAACTCCTGGAGA-AGGAACTATTGTAA-TAATCTAGAT-GAGA  47
      |||||||    |||||||| || | ||||||||| |||||||||| ||||
seq2  AAGAACA---CCCTGGAGAGAGAACCTATTGTAATTAATCTAGATGGAGA  47

seq1  GGTTGTCCTACTCAGAGTTTCTATTCCTGCAC-AAAACATCATGACCAAG  96
      ||| ||| ||||||||| |||| ||||||||| |||||||||||||||||
seq2  GGTGGTCTTACTCAGAG-TTCT-TTCCTGCACAAAAACATCATGACCAAG  95

seq1  AAGCAAGTTTGGAAGGAAAGGGTTTATTTGGCTTATACTTCCACATTGAC  146
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AAGCAAGTTTGGAAGGAAAGGGTTTATTTGGC-TATACTTCCACATTGAC  144

seq1  TCAAGACTACCAGCCCAGGGATGGCACCA-CCCACAATGAGCTCTCCCAT  195
      || |||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TC-AGACTACCAGCCCAGGGATGGCACCACCCCACAATGAGCTCTCCCAT  193

seq1  CCTTGATCACTAATTGAGAAAATGCCTTACAGCTGGATCTCATGGAGACA  245
      || ||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CC-TGATCACTAATTGAGAAAATGCCTTACAGCTGGATCTCATGAAGACA  242

seq1  TTTTCTCAAGGGAGGCTCCTTTTTCTGTGATAACTCCAGATTGTGTTAAG  295
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TTTTCTCAAGGGAGGCTCC-TTTTCTGTGATAACTCCAGATTGTGTTAAG  291

seq1  TTGACAAGCAAAGCCAGTCTGTACAGAGGTAGGTGGAAGAGACCTGATTT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACAAGCAAAGCCAGTCTGTACAGAGGTAGGTGGAAGAGACCTGATTT  341

seq1  TTGAAGGGATTGGGATCTAAGTCCGTTGAAACTACAGCCATAGAATTTCC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGGGATTGGGATCTAAGTCCGTTGAAACTACAGCCATAGAATTTCC  391

seq1  TGATAGATGAGATGAGTCATGTGAAAAGCAGACAGCCAGGATAATTACAA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGATGAGATGAGTCATGTGAAAAGCAGACAGCCAGGATAATTACAA  441

seq1  AGTATTTGGAGAGGCAACCTAGAGAACAAAGGTAGCTTTGCTGAGACTGG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTTGGAGAGGCAACCTAGAGAACAAAGGTAGCTTTGCTGAGACTGG  491

seq1  GGAAGACTCCAAAGTAGGGAAAAGGTGAAAAGCTCAGCTTTGTATCCATT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGACTCCAAAGTAGGGAAAAGGTGAAAAGCTCAGCTTTGTATCCATT  541

seq1  ATTATTAAAATCTTTGTTACCCATCAGTCTAATCTGAGATGTCTAGGAGG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTAAAATCTTTGTTACCCATCAGTCTAATCTGAGATGTCTAGGAGG  591

seq1  ATACTGAATAAGGCTGCAGTTCAAAGGACAAGTTTCTTTTCTGGATGTAA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGAATAAGGCTGCAGTTCAAAGGACAAGTTTCTTTTCTGGATGTAA  641

seq1  GTTGGAGGTCAAACGAGTTCGAGTGAATACACAGGATTTCTAAGAGAGTG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGAGGTCAAACGAGTTCGAGTGAATACACAGGATTTCTAAGAGAGTG  691

seq1  GGAGTGTCTAAGAGAGTGGGAGTGTCTAAGAGAGTAGGCGTGTCAAGAAA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTGTCTAAGAGAGTGGGAGTGTCTAAGAGAGTAGGCGTGTCAAGAAA  741

seq1  TTGGCCCAAAGGGCTCACTTGGACACCACAGTGCTTAGATAATGGGACTC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCCCAAAGGGCTCACTTGGACACCACAGTGCTTAGATAATGGGACTC  791

seq1  CAAGGAAAAGTGGAGATGGATGAGCAGAGTTCAGGAAGCTACAGTGTAGT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGAAAAGTGGAGATGGATGAGCAGAGTTCAGGAAGCTACAGTGTAGT  841

seq1  AAGTGAAGGAAGAGCTTGGGAAGGGAAGAGTGTTGCCCTGGAGATAGCGA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAAGGAAGAGCTTGGGAAGGGAAGAGTGTTGCCCTGGAGATAGCGA  891

seq1  AGCTCCGGATTCCCACACCAAGTGATAGAACAGGCAGGCAAGAGGAGCCC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCGGATTCCCACACCAAGTGATAGAACAGGCAGGCAAGAGGAGCCC  941

seq1  AGCTGTGGTGTTTGCTATTGAAGGTGAAATATTAGAGCCTCTGATTCAAA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTGGTGTTTGCTATTGAAGGTGAAATATTAGAGCCTCTGATTCAAA  991

seq1  TGATTTAGTGCTTTCAAGGTGTTCAGATGCAAGGCTTGGCACAACGTGCT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTAGTGCTTTCAAGGTGTTCAGATGCAAGGCTTGGCACAACGTGCT  1041

seq1  ATATCTGTGTTAAACAGACAGGAATATTGTGTCCTTCATTTTCTTCCTAG  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTGTGTTAAACAGACAGGAATATTGTGTCCTTCATTTTCTTCCTAG  1091

seq1  TATTTAAAAATGTCCCAGGGTCATTATTTTCCCCCAAAGTTAACAGGTCA  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAAAAATGTCCCAGGGTCATTATTTTCCCCCAAAGTTAACAGGTCA  1141

seq1  GAGAATTC  1153
      ||||||||
seq2  GAGAATTC  1149

seq1: chr1_31217346_31218232
seq2: B6Ng01-146F22.g_258_1150

seq1  GTGAGTCAAGTTCGGTGGAGGGCATGTGATGTTTGGAGGGACTATAAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTCAAGTTCGGTGGAGGGCATGTGATGTTTGGAGGGACTATAAATA  50

seq1  GGACTCAATGGACTGTGAGAGGGGCTTGCTGGTAGAGCTAGCTTTGCAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTCAATGGACTGTGAGAGGGGCTTGCTGGTAGAGCTAGCTTTGCAGT  100

seq1  GCTTGTTGGTCTTGAGTCTTCACTGATCTTCATGTCTCTGAGAGAGGCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTTGGTCTTGAGTCTTCACTGATCTTCATGTCTCTGAGAGAGGCAC  150

seq1  AGCTAAGAACTTCTGTCATCCCTGTTGGTCCTAATGGCTCCTCCAGACTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAAGAACTTCTGTCATCCCTGTTGGTCCTAATGGCTCCTCCAGACTC  200

seq1  ATGCCAATTCAGCAGAGGCCTGGCTGTCTCTGTTAGTTTGTGCTACTGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCAATTCAGCAGAGGCCTGGCTGTCTCTGTTAGTTTGTGCTACTGCT  250

seq1  GCTGATATCCTGATACTACTGAACTAGATTGCTGGTATATCTGTGAAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGATATCCTGATACTACTGAACTAGATTGCTGGTATATCTGTGAAGTG  300

seq1  TTTTCGAGTGGATAGAGCTGCTGCTGCTAACCTGTGAACTGAAATTTCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCGAGTGGATAGAGCTGCTGCTGCTAACCTGTGAACTGAAATTTCCT  350

seq1  GACAACACAGATGGGATTTGCTCCAAAGAACCATTTCTAAACAGGTCTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAACACAGATGGGATTTGCTCCAAAGAACCATTTCTAAACAGGTCTAC  400

seq1  TTCCCCAGTATCCTTTCGTTTCCACTACCTATGGTGGGTGATGGGCAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCAGTATCCTTTCGTTTCCACTACCTATGGTGGGTGATGGGCAAGA  450

seq1  AGGGAGGTTAAAATGTTTAAGAACCATCATTAGAAGCAGGCTTTGAAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGGTTAAAATGTTTAAGAACCATCATTAGAAGCAGGCTTTGAAAAA  500

seq1  AATTAAAGTTAAAGAGTTTAATGGAATAAGCAAAGGAGTGTGTC-TTATG  549
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AATTAAAGTTAAAGAGTTTAATGGAATAAGCAAAGGAGTGTGTCTTTATG  550

seq1  AGTTCTATTGTATGACATTAATA-TCATGACAACTCGGGAAGGAAAAGGT  598
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AGTTCTATTGTATGACATTAATATTCATGACAACTCGGGAAGGAAAAGGT  600

seq1  TTATTTGGCTTTATAATGCCCT-GGTCACACTTCATTACTAAGGGGAATT  647
      |||||||||||||||||||||| |||||||||||| ||||||||||||||
seq2  TTATTTGGCTTTATAATGCCCTGGGTCACACTTCA-TACTAAGGGGAATT  649

seq1  GGAACAGAAACCTGG-AAGCAAAAACTGAAGCAGAGGCCATGGAGAAATG  696
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GGAACAGAAACCTGGAAAGCAAAAACTGAAGCAGAGGCCATGGAGAAATG  699

seq1  CTCCTTCTTGGCTTCTACCTCCTGGTTTGCTCACTTTAATTTCTTGTACA  746
      |||||||| ||||||||||||||||||||||||||||||||||||| |||
seq2  CTCCTTCTGGGCTTCTACCTCCTGGTTTGCTCACTTTAATTTCTTG-ACA  748

seq1  ACTCAGGACCAGGTTTGTTCAGGGTTGGCACCAACCA-TCATGAGGTGGA  795
      ||||||||||||||||||||||| |||||||  |||| ||||||||||||
seq2  ACTCAGGACCAGGTTTGTTCAGGTTTGGCAC--ACCATTCATGAGGTGGA  796

seq1  -TCTTTCACATCAATTGTCAATCAAGAAAATGTCCCACCAGTTTGCCT-A  843
       |||||||||||| ||||||||||||||||||| ||||| ||||| || |
seq2  TTCTTTCACATCACTTGTCAATCAAGAAAATGT-CCACCTGTTTGTCTAA  845

seq1  CAGGCCAGTCTTATGGGGATATTTTCTTTTTTAAAAA----GATTTAT  887
      ||| ||| ||||||||||   ||||||||||||||||    |||||||
seq2  CAGCCCATTCTTATGGGGTATTTTTCTTTTTTAAAAAAAATGATTTAT  893