BAC Information

Click to search

BAC

Clone NameB6Ng01-146K23
Chromosome1 (Build37)
Map Location 175,381,946 - 175,382,884
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC665819, Slamf9, LOC100040274, Igsf9, Tagln2, Ccdc19, EG240916, Slamf8, Fcrl6, Dusp23, LOC100040320, Crp, LOC665875, Apcs, Olfr16, GA_x5J8B7W5Q1F-395172-396104, Olfr1408, GA_x5J8B7W5Q1F-344462-343889, Olfr1406, Olfr218, Olfr1405-ps1, Olfr1404, Fcer1a, Olfr1403, Darc, Cadm3
Downstream geneAim2, EG240921, BC094916, LOC623121, AI447904, E430029J22Rik, LOC665972, AI607873, Ifi204, EG666028, LOC100040462, Mnda, Ifi203, Ifi202b, Ifi205, Olfr433, Olfr432, GA_x5J8B7W3B3M-30314-31216, Olfr430, Olfr429, Olfr426, Olfr1528-ps1, Olfr244, Olfr424, Olfr423-ps1, Olfr421, Olfr422-ps1, Olfr420, Spna1, Olfr419, 1810030J14Rik, Olfr417, GA_x5J8B7W3B3M-312879-313274, GA_x5J8B7W3B3M-318013-318414, Olfr415, Olfr414, Olfr220
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-146K23.bB6Ng01-146K23.g
ACCDH943759DH943760
length930616
definitionDH943759|Mus musculus domesticus DNA, BAC clone: B6Ng01-146K23, 5' end.DH943760|Mus musculus domesticus DNA, BAC clone: B6Ng01-146K23, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgggctagatttgggccatgttgcctgtgggtggagacctttct
gctcatccttctgtctgacccagatccaaggagaagagatagaggaagtg
agcatgcagactgacttacacaattccagttgctcagtctagcctggggg
aaggggttatagaattcttccaagcagtgatacttcgctatgatagcctc
gtactgagtttaaagactaaggcctgggatgaattccttctctctgtctc
tctctgccccccacccccctttgtgaatgtggaggagtgtcaacatggac
aaatctctccctcccatttcttcattgtgtcttgtcttactatcaaatgc
aaccaagacaggatggtctctcacatggcttctttaggtgttaggagggt
gggttgggctctgtacaactaatcaaaatttgtgtgcctgtgggaagatg
gttgctaggggttcttatttcctgccatattgttctgtgacctttcaact
gggcttcttagtcaaactaaaagcacccagaatccagcccagaagacacc
tagaactgtatttttacttagaaaaagtcaatgaatgtttgttgaatgct
tgtattgcagatgctattttaggagccaggacttgcagacatgaacaaca
gagtccttgcccacaagccacttttattccagcacagaatgtgaaccaaa
aaactactggattgctaagtagacaagtagagaggaaaacgaaacagttt
gtggtaacagagaggaacaagggccagttttagttttataatacatatgc
agggaagtttgagtagaaatctactgagagggtgggttaatttattccac
cacaggagagagtaaatgggtttgacaggggaaagatggcaattatatat
cattatattactttagagaggtacggaatg
gaattctgttgctgatgctcgcatctatggttccagttttctttcttacg
tttctatctccagggttgcctcactttgggttttctttactgtgtctact
tccctttttggtcttggatggttttattcaatacatcacctgtttggtcg
tgtttttctgcaattctttaagggatttttgtgcttcctctttaaggtct
tctacctgtttagcagtggtctcctgtatttctttaagtgagttattaaa
gtccttcttgatgtcctctaccaacatcatgagatatgtttttgaatcag
ggactatcttgggtgttttggggtgcctaggaatgggtgggttgggagtg
ctgcgttctgatgatggtgaattgtcttagtttctgttaataagatagtt
atgtttgccttttgccatctggtaatctctggagttagttgttgtagttg
tctctggttagagcttgttcctcaggtgattatgtttgcttctatcagca
tacgtgaaagactagctctctcctgagttttcagtgttcagagcactctc
tgcaggcaagctatcctcttgcaggggaatggttcctagatatttttgtg
ttcatatgtgacctac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_175381946_175382884
seq2: B6Ng01-146K23.b_42_971

seq1  GAATTCTGGGCTAGATTTGGGCCATGTTGCCTGTGGGTGGAGACCTTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGGCTAGATTTGGGCCATGTTGCCTGTGGGTGGAGACCTTTCT  50

seq1  GCTCATCCTTCTGTCTGACCCAGATCCAAGGAGAAGAGATAGAGGAAGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATCCTTCTGTCTGACCCAGATCCAAGGAGAAGAGATAGAGGAAGTG  100

seq1  AGCATGCAGACTGACTTACACAATTCCAGTTGCTCAGTCTAGCCTGGGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGCAGACTGACTTACACAATTCCAGTTGCTCAGTCTAGCCTGGGGG  150

seq1  AAGGGGTTATAGAATTCTTCCAAGCAGTGATACTTCGCTATGATAGCCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGGTTATAGAATTCTTCCAAGCAGTGATACTTCGCTATGATAGCCTC  200

seq1  GTACTGAGTTTAAAGACTAAGGCCTGGGATGAATTCCTTCTCTCTGTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGAGTTTAAAGACTAAGGCCTGGGATGAATTCCTTCTCTCTGTCTC  250

seq1  TCTCTGCCCCCCACCCCCCTTTGTGAATGTGGAGGAGTGTCAACATGGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGCCCCCCACCCCCCTTTGTGAATGTGGAGGAGTGTCAACATGGAC  300

seq1  AAATCTCTCCCTCCCATTTCTTCATTGTGTCTTGTCTTACTATCAAATGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTCTCCCTCCCATTTCTTCATTGTGTCTTGTCTTACTATCAAATGC  350

seq1  AACCAAGACAGGATGGTCTCTCACATGGCTTCTTTAGGTGTTAGGAGGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAGACAGGATGGTCTCTCACATGGCTTCTTTAGGTGTTAGGAGGGT  400

seq1  GGGTTGGGCTCTGTACAACTAATCAAAATTTGTGTGCCTGTGGGAAGATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTGGGCTCTGTACAACTAATCAAAATTTGTGTGCCTGTGGGAAGATG  450

seq1  GTTGCTAGGGGTTCTTATTTCCTGCCATATTGTTCTGTGACCTTTCAACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTAGGGGTTCTTATTTCCTGCCATATTGTTCTGTGACCTTTCAACT  500

seq1  GGGCTTCTTAGTCAAACTAAAAGCACCCAGAATCCAGCCCAGAAGACACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTCTTAGTCAAACTAAAAGCACCCAGAATCCAGCCCAGAAGACACC  550

seq1  TAGAACTGTATTTTTACTTAGAAAAAGTCAATGAATGTTTGTTGAATGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACTGTATTTTTACTTAGAAAAAGTCAATGAATGTTTGTTGAATGCT  600

seq1  TGTATTGCAGATGCTATTTTAGGAGCCAGGAC-TGCAGACATGAACAACA  649
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TGTATTGCAGATGCTATTTTAGGAGCCAGGACTTGCAGACATGAACAACA  650

seq1  GAGTCCTTGCCCACAAGCCACTTTTATTCCAGCACAGAATGTGAACCAAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCCTTGCCCACAAGCCACTTTTATTCCAGCACAGAATGTGAACCAAA  700

seq1  AAACTACTGGATTGCTAAGTAGACAAGTAGAGAGGAAAACGAAACAGTTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTACTGGATTGCTAAGTAGACAAGTAGAGAGGAAAACGAAACAGTTT  750

seq1  GTGGTAACAGAGAGGAAC-AGGGCCAGTTTTAGTTTTATAATACATATGC  798
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GTGGTAACAGAGAGGAACAAGGGCCAGTTTTAGTTTTATAATACATATGC  800

seq1  AGGGAAGTTTGAGTAGAAATCTACAGAGAGGGTGGGTTTAATTTATTCCA  848
      |||||||||||||||||||||||| ||||||||||| |||||||||||||
seq2  AGGGAAGTTTGAGTAGAAATCTACTGAGAGGGTGGG-TTAATTTATTCCA  849

seq1  ACACACAGTGAAGAGAGATAAATGGTTTTGACAAGGGGAAAAGATGGCAA  898
       ||||    | |||||| ||||||| |||||||  ||| |||||||||||
seq2  CCACA----GGAGAGAG-TAAATGGGTTTGACA--GGGGAAAGATGGCAA  892

seq1  TTATTATATCATTATTAATACTTTAAGAGAGTTACGGAATG  939
      ||| |||||||||| || |||||| |||||| |||||||||
seq2  TTA-TATATCATTA-TATTACTTT-AGAGAGGTACGGAATG  930