BAC Information

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BAC

Clone NameB6Ng01-146M08
Chromosome1 (Build37)
Map Location 12,342,180 - 12,343,259
singlet/doubletsinglet
Overlap genenone
Upstream geneA830018L16Rik, LOC665262
Downstream geneLOC100039709, LOC621353, LOC100039733, Sulf1, Slco5a1, LOC383490, Prdm14, Ncoa2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-146M08.bB6Ng01-146M08.g
ACCDH943825DH943826
length1,2371,065
definitionDH943825|Mus musculus domesticus DNA, BAC clone: B6Ng01-146M08, 5' end.DH943826|Mus musculus domesticus DNA, BAC clone: B6Ng01-146M08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcccaagtattcagatccatgagcctattcttgttcaaactgcatt
tcactccctggatcccagaggcatttagccacatcagaatgcaaaactgc
actcagtccaacttcaaaagtacccatagtctataacagtttcaaccctg
tttaaaaatccacaattcgaagtctcttttgaggctcatggaaatctctt
aactgaaatgtcctgtaaaataaaaattaaaaagcagatcacatacttct
acataaaatggcacagactatacagtcccattctaaaagtgaggaaaggg
aatatagccagtaaatactggaccaaagcaagatggaaaaccagctgagc
aaactctaaactctgcatctccatgtctgatatcatgtgcttttcagaac
tccaacccctttcaactttgttgactgtaacacacttctctctctgggct
gattccactccctgttagcagctatctttggtaggcatcctataactctg
gtatcttcaacatcttgaattctctaagacaatccagcctccacctttac
aaattcatacaatggcctctctgggcctcaatgcagggctattcctatca
cacactgaaggcctcagctgcttttgttagttacagagagacattctata
acccatttcttctgtatttactctaaaaccagaatcatgtggctgaagct
gtcaagttcttcagcttgcaagggctggaacatggctccctcgttcaaac
acatttacaccagctttctgttttcaattcatcctttattagctaagctg
tcctggaatgttctctgtatctgaagctggtcttgaactcaaagatctac
ttgtctgtacttcctgagtgctaggcttaaagctgtgagtgacaatgcct
agtcataggctttctaaattccattttgcaagtgtgcagcttagctgggt
agagtctagccctgaggttactgcttcctttattccatttatgatcaggt
taaaaaaaaaaaacaacacacaaacaaaacaccccaaacctgttatctcc
ttgagcactagacttagttctactatactttcgtgctctttctcaaattg
catttgaatttttcctgttcatcttgcttcaagacctaaatagattgtcc
ctataccgaatgaaggtatacctgctttcgactttgccaagtagcaactg
tccatagttcacggcattggtttgtgtaagggcatac
gaattctttgcaactcaaatcacagacatcaaagcatgctgtctgacttc
gctccagccaggctccctgtgctgcagaacttcttgcacctttttttttc
cctctcagagcctcagtctcccattctgtagttgaaggaatggctgtagc
tggtgcaatgataaggcctatgtgagctaacatttctacagtacttccat
gaaggcctgaccttagcagtacagtgggattaagcatattacacccagtc
caggatcttcagcttgttggagacttacttgaaatatgcacctgtgtcag
ttcaaagctgccactctgtagacaaagccaatcttctcactcatctcata
gctttgagtgttcaactctggctgctgtcactcttcctagctgctcatga
cagttatagaaatcactcttgatcatccacctgggctactccctagtcta
aacttctactcatgatcttggcccccatgcccatctctccttttctgaaa
atggcaagggagaacaatagctttctctcagttgtgttaggacattgcta
cttgccaagtgtatctttaagatttgtgcatacaacactgtgtagatgcc
ggcggggcagctggcttggcatggattggtattatagtcacagactcttc
tgcagctttctccctggttctgttcatgatggcccttgccaaaacacctc
acctggttgtgtgcattatctgtgtcagttcacttctcaaagacccacaa
acttcccttggtttctcactcctacattcccatggttgcatatctctgaa
tatgaatggctaacattttttttatgaaaggagaatctaggtagttgtct
caaagtcagaatgtcactgcttgtatattcatcattctgaagaattcaca
cacatccagacatgtgctgggcttgataaatatttgtgattggagacaat
gccttaacaatgatatttgttagtcccatgtaaatcactgggtgagtgca
tcattcctcgactcagtctaccttgtacattgtaggttgagattataaaa
accgcagttgaagac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_12342180_12343259
seq2: B6Ng01-146M08.g_69_1133

seq1  GAATTCTTTGCAACTCAAATCACAGACATCAAAGCATGCTGTCTGACTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGCAACTCAAATCACAGACATCAAAGCATGCTGTCTGACTTC  50

seq1  GCTCCAGCCAGGCTCCCTGTGCTGCAGAACTTCTTGCACCTTTTTTTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCAGCCAGGCTCCCTGTGCTGCAGAACTTCTTGCACCTTTTTTTTTC  100

seq1  CCTCTCAGAGCCTCAGTCTCCCATTCTGTAGTTGAAGGAATGGCTGTAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCAGAGCCTCAGTCTCCCATTCTGTAGTTGAAGGAATGGCTGTAGC  150

seq1  TGGTGCAATGATAAGGCCTATGTGAGCTAACATTTCTACAGTACTTCCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGCAATGATAAGGCCTATGTGAGCTAACATTTCTACAGTACTTCCAT  200

seq1  GAAGGCCTGACCTTAGCAGTACAGTGGGATTAAGCATATTACACCCAGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCCTGACCTTAGCAGTACAGTGGGATTAAGCATATTACACCCAGTC  250

seq1  CAGGATCTTCAGCTTGTTGGAGACTTACTTGAAATATGCACCTGTGTCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATCTTCAGCTTGTTGGAGACTTACTTGAAATATGCACCTGTGTCAG  300

seq1  TTCAAAGCTGCCACTCTGTAGACAAAGCCAATCTTCTCACTCATCTCATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAGCTGCCACTCTGTAGACAAAGCCAATCTTCTCACTCATCTCATA  350

seq1  GCTTTGAGTGTTCAACTCTGGCTGCTGTCACTCTTCCTAGCTGCTCATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGAGTGTTCAACTCTGGCTGCTGTCACTCTTCCTAGCTGCTCATGA  400

seq1  CAGTTATAGAAATCACTCTTGATCATCCACCTGGGCTACTCCCTAGTCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTATAGAAATCACTCTTGATCATCCACCTGGGCTACTCCCTAGTCTA  450

seq1  AACTTCTACTCATGATCTTGGCCCCCATGCCCATCTCTCCTTTTCTGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCTACTCATGATCTTGGCCCCCATGCCCATCTCTCCTTTTCTGAAA  500

seq1  ATGGCAAGGGAGAACAATAGCTTTCTCTCAGTTGTGTTAGGACATTGCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCAAGGGAGAACAATAGCTTTCTCTCAGTTGTGTTAGGACATTGCTA  550

seq1  CTTGCCAAGTGTATCTTTAAGATTTGTGCATACAACACTGTGTAGATGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCAAGTGTATCTTTAAGATTTGTGCATACAACACTGTGTAGATGCC  600

seq1  GGCGGGGCAGCTGGCTTGGCATGGATTGGTATTATAGTCACAGACTCTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGGGGCAGCTGGCTTGGCATGGATTGGTATTATAGTCACAGACTCTTC  650

seq1  TGCAGCTTTCTCCCTGGTTCTGTTCATGATGGCCCTTGCCAAAACACCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCTTTCTCCCTGGTTCTGTTCATGATGGCCCTTGCCAAAACACCTC  700

seq1  ACCTGGTTGTGTGCATTATCTGTGTCAGTTCACTTCTCAAAGACCCACAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGTTGTGTGCATTATCTGTGTCAGTTCACTTCTCAAAGACCCACAA  750

seq1  ACTTCCCTTGGTTTCTCACTCCTACATTCCCATGGTTGCATATCTCTGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCCTTGGTTTCTCACTCCTACATTCCCATGGTTGCATATCTCTGAA  800

seq1  TATGAATGGCTAACATTTTTTTTATGAAAGGAGAATCTAGGTAGTTGTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAATGGCTAACATTTTTTTTATGAAAGGAGAATCTAGGTAGTTGTCT  850

seq1  CAAAGTCAGAAGGTCACTGCTTGTATATTCATCATTCTGAAGAATTCACA  900
      ||||||||||| ||||||||||||||||||||||||||||||||||||| 
seq2  CAAAGTCAGAATGTCACTGCTTGTATATTCATCATTCTGAAGAATTCAC-  899

seq1  ACACATCCAGACATGTGCTGGGCTTGATAAATATTTGTGGATTGGAGAAC  950
      |||||||||||||||||||||||||||||||||||||| |||||||||  
seq2  ACACATCCAGACATGTGCTGGGCTTGATAAATATTTGT-GATTGGAGA--  946

seq1  AAATGCCTTAAACAAATGATATTTGTTAGGTCCCATGTAAATCAACTGGG  1000
       ||||||||||   |||||||||||||| |||||||||||||| ||||||
seq2  CAATGCCTTAA--CAATGATATTTGTTA-GTCCCATGTAAATC-ACTGGG  992

seq1  TGAGTGGCCATCATCTCTCAGACTCAGTCTAACCCTTGTACA-TGTAGTA  1049
      ||||||  ||||||  ||| |||||||||||  ||||||||| |||||  
seq2  TGAGTG--CATCATTCCTC-GACTCAGTCTA--CCTTGTACATTGTAGGT  1037

seq1  TGAGGATTATAAAAACACGCAGTTTGAAGAC  1080
      ||| |||||||||||| ||||| ||||||||
seq2  TGA-GATTATAAAAAC-CGCAG-TTGAAGAC  1065