BAC Information

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BAC

Clone NameB6Ng01-146M22
Chromosome1 (Build37)
Map Location 166,475,728 - 166,649,338
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC665237, Gm207, LOC100039626, Kifap3, Scyl3, BC055324, 2810422O20Rik, Sele, Sell, Selp, F5, Slc19a2, 4930455F23Rik, Blzf1, Nme7, Atp1b1, LOC100040065
Downstream geneDpt, Xcl1, 1700029M03Rik, Tbx19, Sft2d2, Tiprl, Gpr161, Iqwd1, Brp44, Sacy, Ppia-ps1-1625, Mpzl1, Rcsd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-146M22.bB6Ng01-146M22.g
ACCDH943853DH943854
length1,0371,012
definitionDH943853|Mus musculus domesticus DNA, BAC clone: B6Ng01-146M22, 5' end.DH943854|Mus musculus domesticus DNA, BAC clone: B6Ng01-146M22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(166,648,305 - 166,649,338)(166,475,728 - 166,476,730)
sequence
gaattctttcctgactcttggtctgggttgagggagagctttctccaata
aatcctgacatctgtctgccattgtgacagctgtgaatagttaggtgtcc
tctttgcccttaatctatgaagtttctttataaaggattattatgcatta
atctttgccctatagctgaaaatgatgactaaatggctgggcatagtgct
acatgcgcgaaatcttatctaggaagctgaagtagaattgctgccagatt
ttatacagccttagttatatctgagtttgaaaccagattatgatatgaga
ctctatcttttaaaaaaaagtaaataaatgaaaaagctggtaatggataa
aggatgagatggatggacagatgaatgaggaatgcatggctaagttgtga
acttttttttttttgattcccctgtggtatcccctgactttggtcaaacc
attatgtcaaaatgtggataggatggaatgagaaaaaacttgtattaaca
gttattaagagtgctttgtgagccaggcatggtggcacacgcctttaatc
ccagcactcaggaggcagaggcaggcagatttctgagttcgaggccggcc
tggtctacaaagcaagttccaggacagccagggctacacagagaaaccct
gtatcaaaagaaaaaagaaaaaaaaaagagtgctttgttgttctggtgtt
atgtatctgcagtcatggaagcagagaagtaatggtctcacagcaagttt
atgtttctttttatatggcaagtggaaataagatgactatggagctgagg
ttaagttcagtacaccgacccttcctctggaaccatacaaaggttatact
gaaggatttttaaaggtgtaggaagatgataaggtgattgttaaattgga
gacaataagcaatgccacagatttttcgaagatggttcatggaaaacact
ggtagcaactgaccatctagaactgaaaagttgaagactgatcatgtaga
gagaagattagcagtttagcttcagaatccttataca
gaattcttttctccatttccttaggttgtagtatgagacttaagctatca
agggtgcctactctaggtagaggagtgggggaaccagtgaacagagactt
cctagacaacgtaaccttgttgccattctcaaactgtttgaacttggcac
aagctaccaatttctgatccaccttctgacaacaatcagctaacacaagc
atcaaaattacaatgaattagcaggctcaaagtatgcagcagatggcttg
acttccatcaggggcttcctaattggcatttaagttggacagagactatt
aggaagtgcactgtgctgaacagatgtgagatatcaggtcctctgctctc
cctgatttccaaaactgactttgtgaattggaaatgcctgcctgttacga
aaagcccagctttgattgtcctcttcacactgtttgctagtcactagttc
tctggactttgaagtctaccctagatgccgttagtagaggaagctctagg
tgtagctactgatttcccaggaagaagctagtgtgtgtgtgtgtgcacgt
gtgtgtatgttcttgctgttatccctcctagaatttgtgtgaaaatcagt
gagagagctgtggaatcccccgtggtcttctctctgggttccttctatct
tctaaagtgacatagaggattctctctctctctctctctctctctctctc
tctctctctctgactaatgcttctcagatccagctcattgtggggagctt
ccacacacaatgatcttcttgaaggcagagccagatgtggattccctctg
aggctgaaagtgcctgtctttcatggctgaggaatggatagtgtaaatgc
gtgtcttccttggctgagaaatgtgtggcttaatcagtattttgcgaaat
ggatactggactggaggatcttggctgagctacttttagcaggttatgtg
gtcaggctcctagacttttgtacatccaaaagtttccccattttctccat
agagacagtacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_166648305_166649338
seq2: B6Ng01-146M22.b_50_1086 (reverse)

seq1  TGTATAA-GAATCTGAAGCTTAAACTGGCTTAATCTTCTCTCTACATGCT  49
      ||||||| || |||||||| |||||||   |||||||||||||||||| |
seq2  TGTATAAGGATTCTGAAGC-TAAACTG--CTAATCTTCTCTCTACATGAT  47

seq1  CAGTC-TCAACTTTTTCAGTTCTAGTTGGTCAGTTGCTACCAGTGTTTTC  98
      ||||| ||||| ||||||||||||| ||||||||||||||||||||||||
seq2  CAGTCTTCAAC-TTTTCAGTTCTAGATGGTCAGTTGCTACCAGTGTTTTC  96

seq1  CTTG-ACCATCTTCCAAAAATCTGTTGGCATTGCTTATTGTCTCCA--TT  145
      | || ||||||||| ||||||||| |||||||||||||||||||||  ||
seq2  CATGAACCATCTTCGAAAAATCTG-TGGCATTGCTTATTGTCTCCAATTT  145

seq1  TACCATCACCTTATCATCTTCCTACACCCTTAAAAATCCTTCAGTATAAC  195
       || |||||||||||||||||||||||| |||||||||||||||||||||
seq2  AACAATCACCTTATCATCTTCCTACACCTTTAAAAATCCTTCAGTATAAC  195

seq1  CTTTGTATGGTTCCAGAGGAAGGGTCGGTGTACTGAACTTAACCTCAGCT  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTATGGTTCCAGAGGAAGGGTCGGTGTACTGAACTTAACCTCAGCT  245

seq1  CCATAGTCATCTTATTTCCACTTGCCATAT-AAAAGAAACAT-AACTTGC  293
      |||||||||||||||||||||||||||||| ||||||||||| |||||||
seq2  CCATAGTCATCTTATTTCCACTTGCCATATAAAAAGAAACATAAACTTGC  295

seq1  TGTGAGACCATTACTTCTCTGCTTCCATGACTGCAGATACATAACACCAG  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGACCATTACTTCTCTGCTTCCATGACTGCAGATACATAACACCAG  345

seq1  AACAACAAAGCACTC-TTTTTTTTTCTTTTTTCTTTTGATACAGGGTTTC  392
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AACAACAAAGCACTCTTTTTTTTTTCTTTTTTCTTTTGATACAGGGTTTC  395

seq1  TCTGTGTAGCCCTGGCTGTCCTGGAACTTGCTTTGTAGACCAGGCCGGCC  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTAGCCCTGGCTGTCCTGGAACTTGCTTTGTAGACCAGGCCGGCC  445

seq1  TCGAACTCAGAAATCTGCCTGCCTCTGCCTCCTGAGTGCTGGGATTAAAG  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAACTCAGAAATCTGCCTGCCTCTGCCTCCTGAGTGCTGGGATTAAAG  495

seq1  GCGTGTGCCACCATGCCTGGCTCACAAAGCACTCTTAATAACTGTTAATA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTGTGCCACCATGCCTGGCTCACAAAGCACTCTTAATAACTGTTAATA  545

seq1  CAAGTTTTTTCTCATTCCATCCTATCCACATTTTGACATAATGGTTTGAC  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTTTTTCTCATTCCATCCTATCCACATTTTGACATAATGGTTTGAC  595

seq1  CAAAGTCAGGGGATACCACAGGGGAATCAAAAAAAAAAAAGTTCACAACT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTCAGGGGATACCACAGGGGAATCAAAAAAAAAAAAGTTCACAACT  645

seq1  TAGCCATGCATTCCTCATTCATCTGTCCATCCATCTCATCCTTTATCCAT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCATGCATTCCTCATTCATCTGTCCATCCATCTCATCCTTTATCCAT  695

seq1  TACCAGCTTTTTCATTTATTTACTTTTTTTTAAAAGATAGAGTCTCATAT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAGCTTTTTCATTTATTTACTTTTTTTTAAAAGATAGAGTCTCATAT  745

seq1  CATAATCTGGTTTCAAACTCAGATATAACTAAGGCTGTATAAAATCTGGC  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATCTGGTTTCAAACTCAGATATAACTAAGGCTGTATAAAATCTGGC  795

seq1  AGCAATTCTACTTCAGCTTCCTAGATAAGATTTCGCGCATGTAGCACTAT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATTCTACTTCAGCTTCCTAGATAAGATTTCGCGCATGTAGCACTAT  845

seq1  GCCCAGCCATTTAGTCATCATTTTCAGCTATAGGGCAAAGATTAATGCAT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGCCATTTAGTCATCATTTTCAGCTATAGGGCAAAGATTAATGCAT  895

seq1  AATAATCCTTTATAAAGAAACTTCATAGATTAAGGGCAAAGAGGACACCT  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATCCTTTATAAAGAAACTTCATAGATTAAGGGCAAAGAGGACACCT  945

seq1  AACTATTCACAGCTGTCACAATGGCAGACAGATGTCAGGATTTATTGGAG  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATTCACAGCTGTCACAATGGCAGACAGATGTCAGGATTTATTGGAG  995

seq1  AAAGCTCTCCCTCAACCCAGACCAAGAGTCAGGAAAGAATTC  1034
      ||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTCTCCCTCAACCCAGACCAAGAGTCAGGAAAGAATTC  1037

seq1: chr1_166475728_166476730
seq2: B6Ng01-146M22.g_69_1080

seq1  GAATTCTTTTCTCCATTTCCTTAGGTTGTAGTATGAGACTTAAGCTATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTCTCCATTTCCTTAGGTTGTAGTATGAGACTTAAGCTATCA  50

seq1  AGGGTGCCTACTCTAGGTAGAGGAGTGGGGGAACCAGTGAACAGAGACTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTGCCTACTCTAGGTAGAGGAGTGGGGGAACCAGTGAACAGAGACTT  100

seq1  CCTAGACAACGTAACCTTGTTGCCATTCTCAAACTGTTTGAACTTGGCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGACAACGTAACCTTGTTGCCATTCTCAAACTGTTTGAACTTGGCAC  150

seq1  AAGCTACCAATTTCTGATCCACCTTCTGACAACAATCAGCTAACACAAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTACCAATTTCTGATCCACCTTCTGACAACAATCAGCTAACACAAGC  200

seq1  ATCAAAATTACAATGAATTAGCAGGCTCAAAGTATGCAGCAGATGGCTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAATTACAATGAATTAGCAGGCTCAAAGTATGCAGCAGATGGCTTG  250

seq1  ACTTCCATCAGGGGCTTCCTAATTGGCATTTAAGTTGGACAGAGACTATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCATCAGGGGCTTCCTAATTGGCATTTAAGTTGGACAGAGACTATT  300

seq1  AGGAAGTGCACTGTGCTGAACAGATGTGAGATATCAGGTCCTCTGCTCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGTGCACTGTGCTGAACAGATGTGAGATATCAGGTCCTCTGCTCTC  350

seq1  CCTGATTTCCAAAACTGACTTTGTGAATTGGAAATGCCTGCCTGTTACGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATTTCCAAAACTGACTTTGTGAATTGGAAATGCCTGCCTGTTACGA  400

seq1  AAAGCCCAGCTTTGATTGTCCTCTTCACACTGTTTGCTAGTCACTAGTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCCAGCTTTGATTGTCCTCTTCACACTGTTTGCTAGTCACTAGTTC  450

seq1  TCTGGACTTTGAAGTCTACCCTAGATGCCGTTAGTAGAGGAAGCTCTAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGACTTTGAAGTCTACCCTAGATGCCGTTAGTAGAGGAAGCTCTAGG  500

seq1  TGTAGCTACTGATTTCCCAGGAAGAAGCTAGTGTGTGTGTGTGTGCACGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCTACTGATTTCCCAGGAAGAAGCTAGTGTGTGTGTGTGTGCACGT  550

seq1  GTGTGTATGTTCTTGCTGTTATCCCTCCTAGAATTTGTGTGAAAATCAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTATGTTCTTGCTGTTATCCCTCCTAGAATTTGTGTGAAAATCAGT  600

seq1  GAGAGAGCTGTGGAATCCCCCGTGGTCTTCTCTCTGGGTTCCTTCTATCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGCTGTGGAATCCCCCGTGGTCTTCTCTCTGGGTTCCTTCTATCT  650

seq1  TCTAAAGTGACATAGAGGATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAGTGACATAGAGGATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  700

seq1  TCTCTCTCTCTGACTAATGCTTCTCAGATCCAGCTCATTGT-GGGAGCTT  749
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TCTCTCTCTCTGACTAATGCTTCTCAGATCCAGCTCATTGTGGGGAGCTT  750

seq1  CCACACACAATGATCTTCTTGAAGGCAGAGCCAGATGTGGATTCCC-CTG  798
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CCACACACAATGATCTTCTTGAAGGCAGAGCCAGATGTGGATTCCCTCTG  800

seq1  AAGGCTGAAAGTGCCTGTC-TTCATGGCTGAGGAATGGATAGTGTAAATG  847
       |||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  -AGGCTGAAAGTGCCTGTCTTTCATGGCTGAGGAATGGATAGTGTAAATG  849

seq1  CGTGTCTTCC-TGGCTGAGAAATGTGTGGCTTAATCAGTA-TTTGCGAAA  895
      |||||||||| ||||||||||||||||||||||||||||| |||||||||
seq2  CGTGTCTTCCTTGGCTGAGAAATGTGTGGCTTAATCAGTATTTTGCGAAA  899

seq1  TGGATACTGGACT-GAGTATC-TGGCTGAGCTACCTTTAGCA-GTTATAG  942
      ||||||||||||| ||| ||| |||||||||||| ||||||| ||||| |
seq2  TGGATACTGGACTGGAGGATCTTGGCTGAGCTACTTTTAGCAGGTTAT-G  948

seq1  TGGTCAGTCTCCTAGACATTTGTACATCCCAAAAGTTCTCCATT---TCC  989
      ||||||| ||||||||| ||||||||||| |||  ||| |||||   |||
seq2  TGGTCAGGCTCCTAGACTTTTGTACATCCAAAAGTTTCCCCATTTTCTCC  998

seq1  ACAGAGACAGTACC  1003
      | ||||||||||||
seq2  ATAGAGACAGTACC  1012