BAC Information

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BAC

Clone NameB6Ng01-148A12
Chromosome1 (Build37)
Map Location 32,086,276 - 32,231,648
singlet/doubletdoublet
Overlap geneLOC100041238, Khdrbs2
Upstream gene4931428L18Rik, LOC666020, Gluld1, 4930521A18Rik, EG226957, EG624262, LOC624275, LOC666056
Downstream geneEG408191, EG633498, LOC213711, LOC100040828
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148A12.bB6Ng01-148A12.g
ACCDH944746DH944747
length1,2271,149
definitionDH944746|Mus musculus domesticus DNA, BAC clone: B6Ng01-148A12, 5' end.DH944747|Mus musculus domesticus DNA, BAC clone: B6Ng01-148A12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,230,387 - 32,231,648)(32,086,276 - 32,087,362)
sequence
gaattctctgaaatttaggcaccctctttgtttcttactgagatgccttt
ctagtcctgagctttttaaaataacccattacaaaagcaggccatgcttc
cccctgctgggaaaaaattaaattacaaggtacattagaatgatttccta
aatctgaagaaatctagtgtttgggaaagaaaaaatcagcaggaaaccag
atacttcgtggtctcctaactcttttactggtcaaaaatactcatgcatc
tcaccctggtaagacttttatctacatctcttagttctgtaagttttaga
aatacaattaatacacattaattgagctaattattaaattattaaattat
taaatgagctaattattgagccatctgtcccaaagagagctccaggtcag
agaagattttgaatcttctttcattgtacactgaatggaaatacttctga
agaactgactgaagcaaacaaatcaaagaacacattttaaatctgttcat
gtttattgagtcattattttccaatatgcagttgctctccaacaggagag
aagagtactgttcgtaactttagtatttcagtttaatttattatgacttg
attattaggtagtggtaaacatgattgcatttcactgcctaactactcta
caaagccagcttttcccttgaaaacaggataagtatttcacattccacat
tttttcctggcagtctttcatgagatactttgttattataggttataata
aatagcaaccactaaaaatgccaaaatgcatctaatgtctctgaatcgta
tgaggagtaaaaatctttctatgatacacaagtaaatctcaaaagtatct
taatgctgaggggcatgctgagagaaagatgtcactgattcttctagtgg
gtaagacctcagctacaaagctacactctagccagtttgatgatgaagca
cttcattattaataaacattcatctaaaattctgcaggtgtgttaaatag
gagagtgcagggtaccaggtatcctggatgtcttcagttgctacattgtt
ccatatatgggaactatattgggttatatttttttgacggagaagtttca
tgtggtacctttttttccacgactttccaagcatgcaaggcagacataaa
tgttctctgactggatcttgtctcatcaggtacttgcatcgcactgtaaa
actgatatattggagcgttccttaggg
gaattctctggatgtcctttccttctgtctctgctctacacttctgtctc
cataattcctcctttgaatattttgttccctcttctaagaaggactgaag
catccacactttgatcctcctttgtcttgagcttcatgtggtctgtgaat
tatatcttgggtgttctgagcttttgagctaatatccacttatcagtgag
tacataccatgtgtactcattgtgcatatcattgtgactgggctacctca
ggatgacattttctagttccatgcacttacctaataatttcaataaagtc
attgtttttaatagctgagtcgtactccattgtgtaaatgtaccatgttt
tctatatccattcccctgttgagggacatctaggttctttccagcttctg
gctattataaataaggctgctatgaacatagtggcgcatgtgtccttgtt
atatatatgttggagcatcttttgggtatatgaccaggagtgatatagct
gggtcctcagatagtactatgtccaattttttctgaggaacttgcagact
gttttccacattttctcttctgaactccaagctttgtccttcaaaacatg
tatcatgggaagaaaaagacaaattaacaaaacaaattccactacactta
aatttaatcacatatagtatatgaataatgcagtgtggagtgtgcactgt
catttaaaggccttctgggccacagattgtaatctagtttgctaacagcc
actatttgcacttaagcacaatggtcactagagtgccacatgcatcagcc
caagcctgttactgctcacacagccttctattgctgagaaaaacagttaa
tctgatatattatttttttccgtttttattagatgttccttaatttacat
ttcaaatgttatcctgaaagtccctatatcctctccccaccctgctcccc
aacccacctactcctgcttcctggccctagaattctcctgtactgggggc
atatcatctttccaagaacaagggcctcttcctcccattgatgggcaact
aaggccatcctccttgctacatatggcaactaaagacacagttcttgggg
gtactgttaattcatattgtgaatccctctgatacacttgagaccagtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_32230387_32231648
seq2: B6Ng01-148A12.b_45_1271 (reverse)

seq1  CCCT-AGGAACGCTCCATAATTGATCAACTGATTTTTAAACCAGGTGTGC  49
      |||| |||||||||||  |||  |||     | ||||| |      ||||
seq2  CCCTAAGGAACGCTCC--AATATATC-----AGTTTTACA------GTGC  37

seq1  GTTTTCTTTTGTGTACCTGTGATGTAGCAGAGATTCAGTTCCCAGAGGAA  99
      |      |    |||||  ||||| ||   |||| ||||   |||| |||
seq2  G-----ATGCAAGTACC--TGATG-AGACAAGATCCAGT---CAGA-GAA  75

seq1  CATCTATGTCTTGCCTTTTGCATTGCTTTGAAAGGTCGTTTGAAAAAAAA  149
      ||| |||||| ||||  ||||| ||||| |||| ||||  || |||||||
seq2  CATTTATGTC-TGCC--TTGCA-TGCTTGGAAA-GTCG--TGGAAAAAAA  118

seq1  GGTA-CACATGAAAACTTCTCCGTCAGAAATAT-TAACCCAATATAGTTC  197
      |||| |||||| |||||||||||||| ||| || ||||||||||||||||
seq2  GGTACCACATG-AAACTTCTCCGTCAAAAAAATATAACCCAATATAGTTC  167

seq1  CATATATGTGAAACAATGGTAGCAACTGAAGACATCCAGGATACCTGGTA  247
      |  |||| || |||||| ||||||||||||||||||||||||||||||||
seq2  C-CATATATGGAACAAT-GTAGCAACTGAAGACATCCAGGATACCTGGTA  215

seq1  CCCTGCACTCTCCTATTTAACACAACTGCAGAATTTTTAGATGAATGTTT  297
      |||||||||||||||||||||||| |||||||| ||||||||||||| ||
seq2  CCCTGCACTCTCCTATTTAACACACCTGCAGAA-TTTTAGATGAATG-TT  263

seq1  TATTAATAATGAAGTGCTTCATCATCAAACTGGCTAGAGTGTAGCTTTGT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAATAATGAAGTGCTTCATCATCAAACTGGCTAGAGTGTAGCTTTGT  313

seq1  AGCCTGAGGTCTTACCCACTAGAAGAATCAGTGACATCTTTCTCTCAGCA  397
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AG-CTGAGGTCTTACCCACTAGAAGAATCAGTGACATCTTTCTCTCAGCA  362

seq1  TGCCCCTCAGCATTAAGATACTTTTGAGATTTACTTGTGTATCATAGAAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCTCAGCATTAAGATACTTTTGAGATTTACTTGTGTATCATAGAAA  412

seq1  GATTTTTACTCCTCATACGATTCAGAGACATTAGATGCATTTTGGCATTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTTACTCCTCATACGATTCAGAGACATTAGATGCATTTTGGCATTT  462

seq1  TTAGTGGTTGCTATTTATTATAACCTATAATAACAAAGTATCTCATGAAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGGTTGCTATTTATTATAACCTATAATAACAAAGTATCTCATGAAA  512

seq1  GACTGCCAGGAAAAAATGTGGAATGTGAAATACTTATCCTGTTTTCAAGG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGCCAGGAAAAAATGTGGAATGTGAAATACTTATCCTGTTTTCAAGG  562

seq1  GAAAAGCTGGCTTTGTAGAGTAGTTAGGCAGTGAAATGCAATCATGTTTA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGCTGGCTTTGTAGAGTAGTTAGGCAGTGAAATGCAATCATGTTTA  612

seq1  CCACTACCTAATAATCAAGTCATAATAAATTAAACTGAAATACTAAAGTT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTACCTAATAATCAAGTCATAATAAATTAAACTGAAATACTAAAGTT  662

seq1  ACGAACAGTACTCTTCTCTCCTGTTGGAGAGCAACTGCATATTGGAAAAT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAACAGTACTCTTCTCTCCTGTTGGAGAGCAACTGCATATTGGAAAAT  712

seq1  AATGACTCAATAAACATGAACAGATTTAAAATGTGTTCTTTGATTTGTTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACTCAATAAACATGAACAGATTTAAAATGTGTTCTTTGATTTGTTT  762

seq1  GCTTCAGTCAGTTCTTCAGAAGTATTTCCATTCAGTGTACAATGAAAGAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCAGTCAGTTCTTCAGAAGTATTTCCATTCAGTGTACAATGAAAGAA  812

seq1  GATTCAAAATCTTCTCTGACCTGGAGCTCTCTTTGGGACAGATGGCTCAA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCAAAATCTTCTCTGACCTGGAGCTCTCTTTGGGACAGATGGCTCAA  862

seq1  TAATTAGCTCATTTAATAATTTAATAATTTAATAATTAGCTCAATTAATG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAGCTCATTTAATAATTTAATAATTTAATAATTAGCTCAATTAATG  912

seq1  TGTATTAATTGTATTTCTAAAACTTACAGAACTAAGAGATGTAGATAAAA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTAATTGTATTTCTAAAACTTACAGAACTAAGAGATGTAGATAAAA  962

seq1  GTCTTACCAGGGTGAGATGCATGAGTATTTTTGACCAGTAAAAGAGTTAG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTACCAGGGTGAGATGCATGAGTATTTTTGACCAGTAAAAGAGTTAG  1012

seq1  GAGACCACGAAGTATCTGGTTTCCTGCTGATTTTTTCTTTCCCAAACACT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACCACGAAGTATCTGGTTTCCTGCTGATTTTTTCTTTCCCAAACACT  1062

seq1  AGATTTCTTCAGATTTAGGAAATCATTCTAATGTACCTTGTAATTTAATT  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTCTTCAGATTTAGGAAATCATTCTAATGTACCTTGTAATTTAATT  1112

seq1  TTTTCCCAGCAGGGGGAAGCATGGCCTGCTTTTGTAATGGGTTATTTTAA  1197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCCAGCAGGGGGAAGCATGGCCTGCTTTTGTAATGGGTTATTTTAA  1162

seq1  AAAGCTCAGGACTAGAAAGGCATCTCAGTAAGAAACAAAGAGGGTGCCTA  1247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTCAGGACTAGAAAGGCATCTCAGTAAGAAACAAAGAGGGTGCCTA  1212

seq1  AATTTCAGAGAATTC  1262
      |||||||||||||||
seq2  AATTTCAGAGAATTC  1227

seq1: chr1_32086276_32087362
seq2: B6Ng01-148A12.g_130_1216

seq1  TTTGAATATTTTGTTCCCTCTTCTAAGAAGGACTGAAGCATCCACACTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAATATTTTGTTCCCTCTTCTAAGAAGGACTGAAGCATCCACACTTT  50

seq1  GATCCTCCTTTGTCTTGAGCTTCATGTGGTCTGTGAATTATATCTTGGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCTCCTTTGTCTTGAGCTTCATGTGGTCTGTGAATTATATCTTGGGT  100

seq1  GTTCTGAGCTTTTGAGCTAATATCCACTTATCAGTGAGTACATACCATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGAGCTTTTGAGCTAATATCCACTTATCAGTGAGTACATACCATGT  150

seq1  GTACTCATTGTGCATATCATTGTGACTGGGCTACCTCAGGATGACATTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTCATTGTGCATATCATTGTGACTGGGCTACCTCAGGATGACATTTT  200

seq1  CTAGTTCCATGCACTTACCTAATAATTTCAATAAAGTCATTGTTTTTAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTCCATGCACTTACCTAATAATTTCAATAAAGTCATTGTTTTTAAT  250

seq1  AGCTGAGTCGTACTCCATTGTGTAAATGTACCATGTTTTCTATATCCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAGTCGTACTCCATTGTGTAAATGTACCATGTTTTCTATATCCATT  300

seq1  CCCCTGTTGAGGGACATCTAGGTTCTTTCCAGCTTCTGGCTATTATAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGTTGAGGGACATCTAGGTTCTTTCCAGCTTCTGGCTATTATAAAT  350

seq1  AAGGCTGCTATGAACATAGTGGCGCATGTGTCCTTGTTATATATATGTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTGCTATGAACATAGTGGCGCATGTGTCCTTGTTATATATATGTTG  400

seq1  GAGCATCTTTTGGGTATATGACCAGGAGTGATATAGCTGGGTCCTCAGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATCTTTTGGGTATATGACCAGGAGTGATATAGCTGGGTCCTCAGAT  450

seq1  AGTACTATGTCCAATTTTTTCTGAGGAACTTGCAGACTGTTTTCCACATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACTATGTCCAATTTTTTCTGAGGAACTTGCAGACTGTTTTCCACATT  500

seq1  TTCTCTTCTGAACTCCAAGCTTTGTCCTTCAAAACATGTATCATGGGAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTCTGAACTCCAAGCTTTGTCCTTCAAAACATGTATCATGGGAAG  550

seq1  AAAAAGACAAATTAACAAAACAAATTCCACTACACTTAAATTTAATCACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGACAAATTAACAAAACAAATTCCACTACACTTAAATTTAATCACA  600

seq1  TATAGTATATGAATAATGCAGTGTGGAGTGTGCACTGTCATTTAAAGGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTATATGAATAATGCAGTGTGGAGTGTGCACTGTCATTTAAAGGCC  650

seq1  TTCTGGGCCACAGATTGTAATCTAGTTTGCTAACAGCCACTATTTGCACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGGCCACAGATTGTAATCTAGTTTGCTAACAGCCACTATTTGCACT  700

seq1  TAAGCACAATGGTCACTAGAGTGCCACATGCATCAGCCCAAGCCTGTTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCACAATGGTCACTAGAGTGCCACATGCATCAGCCCAAGCCTGTTAC  750

seq1  TGCTCACACAGCCTTCTATTGCTGAGAAAAACAGTTAATCTGATATATTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCACACAGCCTTCTATTGCTGAGAAAAACAGTTAATCTGATATATTA  800

seq1  TTTTTTTCCGTTTTTTATTAGATGTTTCCTTAATTTACATTTCAAATGTT  850
      |||||||||| ||||||||||||| |||||||||||||||||||||||||
seq2  TTTTTTTCCG-TTTTTATTAGATG-TTCCTTAATTTACATTTCAAATGTT  848

seq1  ATCCTGAAAGTCCCTATATCCTCTCCCCACCCTGCTCCCCAACCCACCTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGAAAGTCCCTATATCCTCTCCCCACCCTGCTCCCCAACCCACCTA  898

seq1  CTCCTGCTTCCTGGCCCTAGAATTCTCCTGTACT-GGGGCATATCATCTT  949
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CTCCTGCTTCCTGGCCCTAGAATTCTCCTGTACTGGGGGCATATCATCTT  948

seq1  TCCAAGACCAAGGGCCTC-TCCTCCCATTGATGGCCAACT-AGGCCATCC  997
      ||||||| |||||||||| ||||||||||||||| ||||| |||||||||
seq2  TCCAAGAACAAGGGCCTCTTCCTCCCATTGATGGGCAACTAAGGCCATCC  998

seq1  TC--TGCTACATAT-GCAACTAGAGACACAGTTCTGTGGGGTACTGGTTA  1044
      ||  |||||||||| ||||||| ||||||||||||  |||||||| ||||
seq2  TCCTTGCTACATATGGCAACTAAAGACACAGTTCTTGGGGGTACT-GTTA  1047

seq1  GTTCATATTGTTGATCCTCCTGATACATCTTTGAGACCTAGTC  1087
       ||||||||||  ||||  ||||||||   |||||||| ||||
seq2  ATTCATATTGTGAATCCCTCTGATACA--CTTGAGACC-AGTC  1087