BAC Information

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BAC

Clone NameB6Ng01-148C03
Chromosome1 (Build37)
Map Location 27,437,339 - 27,438,433
singlet/doubletsinglet
Overlap genenone
Upstream gene4931408C20Rik, LOC677427
Downstream geneLOC100040952, EG433281
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148C03.bB6Ng01-148C03.g
ACCDH944824DH944825
length1,0901,269
definitionDH944824|Mus musculus domesticus DNA, BAC clone: B6Ng01-148C03, 5' end.DH944825|Mus musculus domesticus DNA, BAC clone: B6Ng01-148C03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatatatcattagatatattcattctctcatagtttgaaggtttt
aatatttaatatgcatttcatattaccttgctataaatagtatgaaaata
ttcagattctctaaatggttgtaatgatttggattttatttaagtggact
acttagctggaagctttttacccatatggtactaccaagtggtagaatcc
ttaatgatggctacagtagaatattgtcattattggaatttgataaatct
gagttggtaaatgttggtttcagggaatcagtcctgtctcacatgtgata
aaatgagatttaatatatctgaccattttgccaaaatgcaacttttcctg
ctaacttacatatgtgcaattgtaaaaccatttcttagactgcaaagggg
acatttagaagcatctcagcctcaggtgttttgttattcatatacacata
cagacacacatacaaacatgcaaacacaaacacacataagagtaaggacc
tgggttacttccttttgtgatctcccttacctgctgttctttatgtttct
tgtatcttgacaggcttgtctttcattagtttacagaaattatttttctc
tgtgattttgttgggaatattttccattgtctttgacatgggtttctttt
ccttactctattcctatccacatatttggtccttttcttcatgccccgta
gttgctggatatttcttagatttaacaattctgagactgagctactcact
atttctatcatgttttcaatgtttggaatcctctcttctatctcttatct
gttggtgaagcttctctttgaggttcttgttcaagctgcaatatttttca
tttcctgatttgtcctcaggtcaggacttttttgttgttgttgactctat
ttctgctttgaggaattcaattgtcttactccttttcttccactgtttgt
atgttcatagggttttagcattgttaagttaataatttaccttatttccg
atttcagattccctctcacctttcttcaagtccccctcatctccccctcc
tttctccccactaccttcttgtacatttgtccagaaaagg
gaattcaaggctgatacctaaacatagtaaaagcaatatgcaataaacca
gtatcaacatcgaactaaatggagagaaatttgaagcaatcccattaaaa
tcagggactagacaaggctgcccattctttccctaagtattcaaagtagt
aattgaggttgtagctagagcaattagacaacaaaagtcggttaaaggga
tacaaattggagaggaagaaatcaaattatctgtattttcagatgatatg
ataatatacttaagtcaccccaaaaactgcaccagagaatccctacagat
gataaacaatttcagcaaaggggctggaaataaaattaagccaaagaaat
cagtagctttcctatactcaaaggataaacaggctgagaaagaaattagg
gaaaagacccattgctgatgggattgcaagtgcatataaccactctggaa
atcagtatggcagttcctcagaaaattggacatagtactacctgaggacc
cacctataccactcctgggagtatacccaaaggatgtcccaacatatatc
aaagacgcatgcttcactatgttcatagcagccatatttatagtaactag
gagctggaaacaacccagatgtccctcaagagtggaatggacacagaata
tgtggtatatttccacaatggaatactactcatccattaaaatcaatgat
ttcatgaaattcacaggaatatggatcgaacttgagaatatcattctgag
tgagatgactcagtcacaaaggaacaaacatggtatgtactcactgataa
ttggatattagtccaaaagtttagaatacccaagattctatttacagacc
atatgaagcccaagaagaaggaagacaaaaatacttcagttctcttagag
gcaaacaaatacttcataggaagaaacatggagacaaactgtggagcaga
gactgaagtaaagaccatgcagagactgccgcatctgtggatccatcaca
gtacagccatcaaacccagatgttattggtggatgccagaaagtgcttga
aatagcttgtcttctgaaggctctgccagagctgacaaatacagaggaga
agctcactggccaacattggactgaggtctgggtccctaatgaggaattg
aaaagaccttgacaggatgcctggcaaggcgagtgttgtgactcatggag
agacacagtgtcatagctgacaccctgaatatccagggcgtgacatacta
agcatcagtatcacctagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_27437339_27438433
seq2: B6Ng01-148C03.b_46_1135 (reverse)

seq1  CCTTTTCTGAGACAAATGTAC-AGAAGGGTTAGTGGGGAGAAAGGAGGTG  49
      ||||||||| ||||||||||| ||||||  |||||||||||||||||| |
seq2  CCTTTTCTG-GACAAATGTACAAGAAGG--TAGTGGGGAGAAAGGAGGGG  47

seq1  AAGATGAGAGGGACTGGAAGGAAAGGTGAGAGGGGAATCTGAAATCTGGA  99
       ||||||| |||||| ||| ||||||||||| |||||||||||||| |||
seq2  GAGATGAGGGGGACTTGAA-GAAAGGTGAGA-GGGAATCTGAAATC-GGA  94

seq1  TATAAGGTAAATTAATAACTTAACAATGCTAAAACCCTATGAACATACAA  149
       ||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AATAAGGTAAATTATTAACTTAACAATGCTAAAACCCTATGAACATACAA  144

seq1  ACAGTGGAAGAAAAGGAGTAAGACAATTGAATTCCTCAAAGCAGAAATAG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGGAAGAAAAGGAGTAAGACAATTGAATTCCTCAAAGCAGAAATAG  194

seq1  AGTCAACAACAACAAAAAAGTCCTGACCTGAGGACAAATCAGGAAATGAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAACAACAACAAAAAAGTCCTGACCTGAGGACAAATCAGGAAATGAA  244

seq1  AAATATTGCAGCTTGAACAAGAACCTCAAAGAGAAGCTTCACCAACAGAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTGCAGCTTGAACAAGAACCTCAAAGAGAAGCTTCACCAACAGAT  294

seq1  AAGAGATAGAAGAGAGGATTCCAAACATTGAAAACATGATAGAAATAGTG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGATAGAAGAGAGGATTCCAAACATTGAAAACATGATAGAAATAGTG  344

seq1  AGTAGCTCAGTCTCAGAATTGTTAAATCTAAGAAATATCCAGCAACTACG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGCTCAGTCTCAGAATTGTTAAATCTAAGAAATATCCAGCAACTACG  394

seq1  GGGCATGAAGAAAAGGACCAAATATGTGGATAGGAATAGAGTAAGGAAAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCATGAAGAAAAGGACCAAATATGTGGATAGGAATAGAGTAAGGAAAA  444

seq1  GAAACCCATGTCAAAGACAATGGAAAATATTCCCAACAAAATCACAGAGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCCATGTCAAAGACAATGGAAAATATTCCCAACAAAATCACAGAGA  494

seq1  AAAATAATTTCTGTAAACTAATGAAAGACAAGCCTGTCAAGATACAAGAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAATTTCTGTAAACTAATGAAAGACAAGCCTGTCAAGATACAAGAA  544

seq1  ACATAAAGAACAGCAGGTAAGGGAGATCACAAAAGGAAGTAACCCAGGTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAAGAACAGCAGGTAAGGGAGATCACAAAAGGAAGTAACCCAGGTC  594

seq1  CTTACTCTTATGTGTGTTTGTGTTTGCATGTTTGTATGTGTGTCTGTATG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTCTTATGTGTGTTTGTGTTTGCATGTTTGTATGTGTGTCTGTATG  644

seq1  TGTATATGAATAACAAAACACCTGAGGCTGAGATGCTTCTAAATGTCCCC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATATGAATAACAAAACACCTGAGGCTGAGATGCTTCTAAATGTCCCC  694

seq1  TTTGCAGTCTAAGAAATGGTTTTACAATTGCACATATGTAAGTTAGCAGG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCAGTCTAAGAAATGGTTTTACAATTGCACATATGTAAGTTAGCAGG  744

seq1  AAAAGTTGCATTTTGGCAAAATGGTCAGATATATTAAATCTCATTTTATC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTTGCATTTTGGCAAAATGGTCAGATATATTAAATCTCATTTTATC  794

seq1  ACATGTGAGACAGGACTGATTCCCTGAAACCAACATTTACCAACTCAGAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTGAGACAGGACTGATTCCCTGAAACCAACATTTACCAACTCAGAT  844

seq1  TTATCAAATTCCAATAATGACAATATTCTACTGTAGCCATCATTAAGGAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCAAATTCCAATAATGACAATATTCTACTGTAGCCATCATTAAGGAT  894

seq1  TCTACCACTTGGTAGTACCATATGGGTAAAAAGCTTCCAGCTAAGTAGTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCACTTGGTAGTACCATATGGGTAAAAAGCTTCCAGCTAAGTAGTC  944

seq1  CACTTAAATAAAATCCAAATCATTACAACCATTTAGAGAATCTGAATATT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTAAATAAAATCCAAATCATTACAACCATTTAGAGAATCTGAATATT  994

seq1  TTCATACTATTTATAGCAAGGTAATATGAAATGCATATTAAATATTAAAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATACTATTTATAGCAAGGTAATATGAAATGCATATTAAATATTAAAA  1044

seq1  CCTTCAAACTATGAGAGAATGAATATATCTAATGATATATGAATTC  1095
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAAACTATGAGAGAATGAATATATCTAATGATATATGAATTC  1090