BAC Information

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BAC

Clone NameB6Ng01-148D11
Chromosome1 (Build37)
Map Location 159,266,040 - 159,402,080
singlet/doubletdoublet
Overlap geneRasal2, Gabarapl2-ps1_1522.1, 2810025M15Rik, BC026585
Upstream gene9430070O13Rik, LOC100038991, Soat1, LOC100039026, Abl2, Tor3a, C530043G21Rik, LOC433368, Ralgps2, Angptl1, 4930439D14Rik, 1700057K13Rik
Downstream geneLztr2, LOC664935, LOC100039217, 6430517E21Rik, Astn1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148D11.bB6Ng01-148D11.g
ACCDH944888DH944889
length9311,093
definitionDH944888|Mus musculus domesticus DNA, BAC clone: B6Ng01-148D11, 5' end.DH944889|Mus musculus domesticus DNA, BAC clone: B6Ng01-148D11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(159,266,040 - 159,266,971)(159,400,981 - 159,402,080)
sequence
gaattcttatttcaaaagaatggtttaaagccaaacaacaaaataaagca
attgccttgatcagatattctgaattaggcaaccaaaaaaaaaaaattag
acacgagtaactacaggactgagtagataacctacattattttcaccgta
actgtttggactaaatattctattttagatcaaacatcatattcctattt
taattttaaaatgttcattttatagttactgttaatctgtatctacaaat
gccttcttcaattatgaatttagggattagaaagtaaaaacagatcatga
ggaatataaaaggaaaaaacttttctctggtttatggtaacagtatcatt
attaacatgcaatgagctgttttagccttttctaaagcataaaaacaaat
atatttctacatctaatttctagccattcatatagaagacaaaaatagaa
aacacaaactaaacttggttaagagattactatctctctttttttttttt
ttaagatttatttatttattatatgaaagtacactgtagctatcttcaga
cacaccagaagagggagtcagatctcgttagggatggttgtgagccacca
tgtggttgctgggatttgaactcaggaccttcggaagagcagtcgggtgc
tcttacctgctgagccatctcaccagccccaagagattactatctcttaa
gagtataaaattctgtaactaaagtaagaccttatattttttaaggattt
caaaattaagccaacctctcctttaattcttaaataattaacataagatc
caaaagcattttaattctattctaaataattatttatgattctatgctaa
agggcaaaaaacataatcatacagatttagttgctctaaactactgtgtg
tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
gaattctgaataatctacaaagcctcctgaggtttctgtgcagcccattg
tgaaaagtgccagagagcacaccacacgtgggtcgtaaccaatggcttcc
cacggggctttgcacagaaaggaagtgagaggctgtttacaaaacacagt
tatccaggatgcaagatggaaggcacaagagtgggtccacttggtctctg
cttcctcctctgtttctcctctgcgcgtaggaccagcaagtgacaccagt
gtccagacacctgcctcccagctcagggatgcctgctgggttctatccaa
gactaactgcattccttctgcgggccggcagctcttgctgctctggtttt
tctacttcaaaaatgagataaattacaaagcacagatgtgaaaaatgaaa
gcaggcctggtgtggtgactcatgcatacttataaactaagtactcagga
ggtactgggatcagaagttcgaggccagccttggctacagagggagctta
aggacagcacagcacatacctcgtcttaagaaaccaaggaggaaaggaaa
gggggatggagaaagagcagacaggaacaatgctctcagagatcaccaga
agccctgggtgaaatatagagactgtaagatagaatagtcctaccaagtc
tctagtgacacatagttaatcagacaaactaaggaagcacacagcaactg
cgggaccagcgccatcaaaagagcttgtaccttggtgcatagtcatcctg
ggaaggagaaactaccaccacagcaatcttagcatctgaacaatgatcgc
cccaggaccccacacccccacatatttaaagcagcctagtggggaaccag
agagctagatttaacacatggataatttctaaagtctccagcgttgccaa
ctggagagtctggagtcattttttgatattttccagttgggtatttgttt
tactatattaagcatttcctgattttctctgcttctgttctgtcacccgc
ccactcagctatttctcgtgacgctgatgctacaggagatggggagcagc
aagacagagagagtagagatgcagggagttaggactgccatgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_159266040_159266971
seq2: B6Ng01-148D11.b_44_974

seq1  GAATTCTTATTTCAAAAGAATGGTTTAAAGCCAAACAACAAAATAAAGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATTTCAAAAGAATGGTTTAAAGCCAAACAACAAAATAAAGCA  50

seq1  ATTGCCTTGATCAGATATTCTGAATTAGGCAACCAAAAAAAAAAAATTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCCTTGATCAGATATTCTGAATTAGGCAACCAAAAAAAAAAAATTAG  100

seq1  ACACGAGTAACTACAGGACTGAGTAGATAACCTACATTATTTTCACCGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACGAGTAACTACAGGACTGAGTAGATAACCTACATTATTTTCACCGTA  150

seq1  ACTGTTTGGACTAAATATTCTATTTTAGATCAAACATCATATTCCTATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTTGGACTAAATATTCTATTTTAGATCAAACATCATATTCCTATTT  200

seq1  TAATTTTAAAATGTTCATTTTATAGTTACTGTTAATCTGTATCTACAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTAAAATGTTCATTTTATAGTTACTGTTAATCTGTATCTACAAAT  250

seq1  GCCTTCTTCAATTATGAATTTAGGGATTAGAAAGTAAAAACAGATCATGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTCTTCAATTATGAATTTAGGGATTAGAAAGTAAAAACAGATCATGA  300

seq1  GGAATATAAAAGGAAAAAACTTTTCTCTGGTTTATGGTAACAGTATCATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATATAAAAGGAAAAAACTTTTCTCTGGTTTATGGTAACAGTATCATT  350

seq1  ATTAACATGCAATGAGCTGTTTTAGCCTTTTCTAAAGCATAAAAACAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACATGCAATGAGCTGTTTTAGCCTTTTCTAAAGCATAAAAACAAAT  400

seq1  ATATTTCTACATCTAATTTCTAGCCATTCATATAGAAGACAAAAATAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTCTACATCTAATTTCTAGCCATTCATATAGAAGACAAAAATAGAA  450

seq1  AACACAAACTAAACTTGGTTAAGAGATTACTATCTCTCTTTTTTTTTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAAACTAAACTTGGTTAAGAGATTACTATCTCTCTTTTTTTTTTTT  500

seq1  TTAAGATTTATTTATTTATTATATGAAAGTACACTGTAGCTATCTTCAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGATTTATTTATTTATTATATGAAAGTACACTGTAGCTATCTTCAGA  550

seq1  CACACCAGAAGAGGGAGTCAGATCTCGTTAGGGATGGTTGTGAGCCACCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCAGAAGAGGGAGTCAGATCTCGTTAGGGATGGTTGTGAGCCACCA  600

seq1  TGTGGTTGCTGGGATTTGAACTCAGGACCTTCGGAAGAGCAGTCGGGTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTTGCTGGGATTTGAACTCAGGACCTTCGGAAGAGCAGTCGGGTGC  650

seq1  TCTTACCTGCTGAGCCATCTCACCAGCCCCAAGAGATTACTATCTCTTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACCTGCTGAGCCATCTCACCAGCCCCAAGAGATTACTATCTCTTAA  700

seq1  GAGTATAAAATTCTGTAACTAAAGTAAGACCTTATATTTTTTAAGGATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTATAAAATTCTGTAACTAAAGTAAGACCTTATATTTTTTAAGGATTT  750

seq1  CAAAATTAAGCCAACCTCTCCTTTAATTCTTAAATAATTAACATAAGATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATTAAGCCAACCTCTCCTTTAATTCTTAAATAATTAACATAAGATC  800

seq1  CAAAAGCATTTTAATTCTATTCTAAATAATTATTTATGATTCTATGCTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGCATTTTAATTCTATTCTAAATAATTATTTATGATTCTATGCTAA  850

seq1  AGGGCAAAAAAACATAATCATACAGATTTAGTTGCTCTAAACTACTGTGT  900
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGC-AAAAAACATAATCATACAGATTTAGTTGCTCTAAACTACTGTGT  899

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  932
      ||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  931

seq1: chr1_159400981_159402080
seq2: B6Ng01-148D11.g_65_1157 (reverse)

seq1  CCAT-GCAGTTCTAACTCCCTGCATCTCTAACTCTCTCTGTCTTTGCTGC  49
      |||| ||||| |||||||||||||||||| |||||||||||| |||||||
seq2  CCATGGCAGTCCTAACTCCCTGCATCTCT-ACTCTCTCTGTC-TTGCTGC  48

seq1  T-CACATCTCCTGTAGGCATCAGCGTCAACGAG-AATAGCTGAGTGGGCG  97
      | | ||||||||||| ||||||||||| ||||| ||||||||||||||||
seq2  TCCCCATCTCCTGTA-GCATCAGCGTC-ACGAGAAATAGCTGAGTGGGCG  96

seq1  GGTGACAAGGAACAGAAGCAGAGAAAATCAGGAAATGCTTAAATATAGTA  147
      |||||||  ||||||||||||||||||||||||||||||| |||||||||
seq2  GGTGACA--GAACAGAAGCAGAGAAAATCAGGAAATGCTT-AATATAGTA  143

seq1  AAAACAAAATACCCAACTGGAAAATATTCAAAAAATGACTCCAGACTCTC  197
      |||   |||||||||||||||||||| |||||||||||||||||||||||
seq2  AAA--CAAATACCCAACTGGAAAATA-TCAAAAAATGACTCCAGACTCTC  190

seq1  CAGTTGGCAACGCTGGAGACTTTAGAAATTATCCATGTGTTAAATCTAGC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGGCAACGCTGGAGACTTTAGAAATTATCCATGTGTTAAATCTAGC  240

seq1  TCTCTGGTTCCCCACTAGGCTGCTTTAAATATGTGGGGGTGTGGGGTCCT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGGTTCCCCACTAGGCTGCTTTAAATATGTGGGGGTGTGGGGTCCT  290

seq1  GGGGCGATCATTGTTCAGATGCTAAGATTGCTGTGGTGGTAGTTTCTCCT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCGATCATTGTTCAGATGCTAAGATTGCTGTGGTGGTAGTTTCTCCT  340

seq1  TCCCAGGATGACTATGCACCAAGGTACAAGCTCTTTTGATGGCGCTGGTC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGGATGACTATGCACCAAGGTACAAGCTCTTTTGATGGCGCTGGTC  390

seq1  CCGCAGTTGCTGTGTGCTTCCTTAGTTTGTCTGATTAACTATGTGTCACT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCAGTTGCTGTGTGCTTCCTTAGTTTGTCTGATTAACTATGTGTCACT  440

seq1  AGAGACTTGGTAGGACTATTCTATCTTACAGTCTCTATATTTCACCCAGG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACTTGGTAGGACTATTCTATCTTACAGTCTCTATATTTCACCCAGG  490

seq1  GCTTCTGGTGATCTCTGAGAGCATTGTTCCTGTCTGCTCTTTCTCCATCC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTGGTGATCTCTGAGAGCATTGTTCCTGTCTGCTCTTTCTCCATCC  540

seq1  CCCTTTCCTTTCCTCCTTGGTTTCTTAAGACGAGGTATGTGCTGTGCTGT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTCCTTTCCTCCTTGGTTTCTTAAGACGAGGTATGTGCTGTGCTGT  590

seq1  CCTTAAGCTCCCTCTGTAGCCAAGGCTGGCCTCGAACTTCTGATCCCAGT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAAGCTCCCTCTGTAGCCAAGGCTGGCCTCGAACTTCTGATCCCAGT  640

seq1  ACCTCCTGAGTACTTAGTTTATAAGTATGCATGAGTCACCACACCAGGCC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCTGAGTACTTAGTTTATAAGTATGCATGAGTCACCACACCAGGCC  690

seq1  TGCTTTCATTTTTCACATCTGTGCTTTGTAATTTATCTCATTTTTGAAGT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTCATTTTTCACATCTGTGCTTTGTAATTTATCTCATTTTTGAAGT  740

seq1  AGAAAAACCAGAGCAGCAAGAGCTGCCGGCCCGCAGAAGGAATGCAGTTA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAACCAGAGCAGCAAGAGCTGCCGGCCCGCAGAAGGAATGCAGTTA  790

seq1  GTCTTGGATAGAACCCAGCAGGCATCCCTGAGCTGGGAGGCAGGTGTCTG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTGGATAGAACCCAGCAGGCATCCCTGAGCTGGGAGGCAGGTGTCTG  840

seq1  GACACTGGTGTCACTTGCTGGTCCTACGCGCAGAGGAGAAACAGAGGAGG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTGGTGTCACTTGCTGGTCCTACGCGCAGAGGAGAAACAGAGGAGG  890

seq1  AAGCAGAGACCAAGTGGACCCACTCTTGTGCCTTCCATCTTGCATCCTGG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGAGACCAAGTGGACCCACTCTTGTGCCTTCCATCTTGCATCCTGG  940

seq1  ATAACTGTGTTTTGTAAACAGCCTCTCACTTCCTTTCTGTGCAAAGCCCC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTGTGTTTTGTAAACAGCCTCTCACTTCCTTTCTGTGCAAAGCCCC  990

seq1  GTGGGAAGCCATTGGTTACGACCCACGTGTGGTGTGCTCTCTGGCACTTT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGAAGCCATTGGTTACGACCCACGTGTGGTGTGCTCTCTGGCACTTT  1040

seq1  TCACAATGGGCTGCACAGAAACCTCAGGAGGCTTTGTAGATTATTCAGAA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAATGGGCTGCACAGAAACCTCAGGAGGCTTTGTAGATTATTCAGAA  1090

seq1  TTC  1100
      |||
seq2  TTC  1093