BAC Information

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BAC

Clone NameB6Ng01-148D18
Chromosome1 (Build37)
Map Location 131,994,917 - 131,996,049
singlet/doubletsinglet
Overlap geneThsd7b
Upstream geneLOC100042732, LOC100042745, LOC100042740
Downstream geneDaf2, Cd55, Zp3r, C4bp, C4bp-ps1, Pfkfb2, Yod1, AA986860, Fcamr, Pigr, Faim3, Il24, Il20, Il19, Il10, Mapkapk2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148D18.bB6Ng01-148D18.g
ACCDH944901DH944902
length9961,120
definitionDH944901|Mus musculus domesticus DNA, BAC clone: B6Ng01-148D18, 5' end.DH944902|Mus musculus domesticus DNA, BAC clone: B6Ng01-148D18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaaatcaagtgggttatctgtaccatacccttccccctttggac
ttccttccaaagcccagggaacctcatagaagagggggcaggaagatagc
accagccccacaccagaaaggattttggtagaacagtgtcttcgggacag
gacaggacttctgcctttatagacttcaggaactcatagctgctgtggat
gtttgcacaacaactgatcaagagcaagccaatcaacattccggggaggg
gcacagattcccaccctacctgaggtgctaataactgttaggggatgctg
ggaagggagagttagttttttttttttttttttttttgttttttgttttt
tgttttttgttttttgttttttgttttttgttttttaaggctataggtca
acctggtaggttgaccacaatacagtggatgtctccacaaccatatgggg
acataggcagtactaaatgggttctgtggaagacatgtctatatgtgtaa
ctatatctgtatctaatctatatctatctctatcatctatatcttttatc
tgtctatctctataaaactataaattttatggccatgtgtagaaaagaac
attattttagatttcatacctagtgcaggtaaatgaaacttactagttaa
gtaaatattatggtctatctgtgacttcttttactatgcaaaatatattt
taggtcaactcagattttcatatatatgacagaaattgtttctggcaatt
taattttccctccattagtgtgagcatgttggctactagattttgtaagt
gggctgacagaggcaaattgttaggatcccaaaggaatggcattttttct
ttgtaaaagaactactcatggattcatattcaccacacactgtgttccat
attacaccgtgcagtctgaatgggacgagaaccactagaattgtactgta
aaaggtttgttaagtacatcacagtgaatcactctgcatcactcat
gaattctctaggcttcaaaggaaagacagacattcatcagttagagtaaa
caatatgaccaggtttaaaatagagaacatagcgtgggaatatagctcac
caggacagtacatgcttagcctagaccaagctgtgggtttaattgtaagt
gctaaaaataaacaaaaatagaatgtatatatgtgagagtgaaaatgttg
agtaactccatgtatccagagactctctttgaagaggtgtcaggttttac
aatctcaaccaagaagatggctcagcatcttcctccacaggctttctctg
tgcctcacacaagtttgtcatttgtggctagcttctcagaccactagaga
ataaggagtaaagacagcaagccaatacatgatgaggcgggtatgtgcat
ctgaacatttttcatttcccatctgatcttggagctttatgtaggaggga
gcatggtgtagaagtgtaagctcttctcagtattgacagcttaagaaacc
cgggtaccttcccccaaaggatttcccaccaatattctgttcagtttgtt
catgagatacggggaaatcgcttttataatgaatttttgatctatatctt
agtgatttgaaggagttaaacagggatgattcctcctgtcctatattaaa
gtatttatgaaaatacatattgatatgcattaaagactgtagacagataa
catgtaaattcaaagagagcctcatttttctacttgttaactgagtatct
atcaatggaatcttgccttttattttggggagattctcctcttccctcta
ctatcctatgagaatgggagcagacgtttctcagctgtaagcagctgccg
ccttgttctattgtagaaggctttcgaacctgccactctatccttgtcag
catctgcagcatgaagctattgttttttcattacgtaattcccacaccca
tttcccctctgttcctttctcctttgattttgtccttgcatgtcctcacc
ttatattctctcttttctgtgagctctatttgccagggcttaataagaat
ccaatgttaaaatagttctggcattgggatgctagagtggtgtctctatt
catttcctcacaggtgattc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_131994917_131996049
seq2: B6Ng01-148D18.g_66_1185

seq1  GAATTCTCTAGGCTTCAAAGGAAAGACAGACATTCATCAGTTAGAGTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTAGGCTTCAAAGGAAAGACAGACATTCATCAGTTAGAGTAAA  50

seq1  CAATATGACCAGGTTTAAAATAGAGAACATAGCGTGGGAATATAGCTCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATGACCAGGTTTAAAATAGAGAACATAGCGTGGGAATATAGCTCAC  100

seq1  CAGGACAGTACATGCTTAGCCTAGACCAAGCTGTGGGTTTAATTGTAAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACAGTACATGCTTAGCCTAGACCAAGCTGTGGGTTTAATTGTAAGT  150

seq1  GCTAAAAATAAACAAAAATAGAATGTATATATGTGAGAGTGAAAATGTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAAAATAAACAAAAATAGAATGTATATATGTGAGAGTGAAAATGTTG  200

seq1  AGTAACTCCATGTATCCAGAGACTCTCTTTGAAGAGGTGTCAGGTTTTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAACTCCATGTATCCAGAGACTCTCTTTGAAGAGGTGTCAGGTTTTAC  250

seq1  AATCTCAACCAAGAAGATGGCTCAGCATCTTCCTCCACAGGCTTTCTCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCAACCAAGAAGATGGCTCAGCATCTTCCTCCACAGGCTTTCTCTG  300

seq1  TGCCTCACACAAGTTTGTCATTTGTGGCTAGCTTCTCAGACCACTAGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCACACAAGTTTGTCATTTGTGGCTAGCTTCTCAGACCACTAGAGA  350

seq1  ATAAGGAGTAAAGACAGCAAGCCAATACATGATGAGGCGGGTATGTGCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGAGTAAAGACAGCAAGCCAATACATGATGAGGCGGGTATGTGCAT  400

seq1  CTGAACATTTTTCATTTCCCATCTGATCTTGGAGCTTTATGTAGGAGGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACATTTTTCATTTCCCATCTGATCTTGGAGCTTTATGTAGGAGGGA  450

seq1  GCATGGTGTAGAAGTGTAAGCTCTTCTCAGTATTGACAGCTTAAGAAACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGTGTAGAAGTGTAAGCTCTTCTCAGTATTGACAGCTTAAGAAACC  500

seq1  CGGGTACCTTCCCCCAAAGGATTTCCCACCAATATTCTGTTCAGTTTGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGTACCTTCCCCCAAAGGATTTCCCACCAATATTCTGTTCAGTTTGTT  550

seq1  CATGAGATACGGGGAAATCGCTTTTATAATGAATTTTTGATCTATATCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGATACGGGGAAATCGCTTTTATAATGAATTTTTGATCTATATCTT  600

seq1  AGTGATTTGAAGGAGTTAAACAGGGATGATTCCTCCTGTCCTATATTAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATTTGAAGGAGTTAAACAGGGATGATTCCTCCTGTCCTATATTAAA  650

seq1  GTATTTATGAAAATACATATTGATATGCATTAAAGACTGTAGACAGATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTATGAAAATACATATTGATATGCATTAAAGACTGTAGACAGATAA  700

seq1  CATGTAAATTCAAAGAGAGCCTCATTTTTCTACTTGTTAACTGAGTATCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTAAATTCAAAGAGAGCCTCATTTTTCTACTTGTTAACTGAGTATCT  750

seq1  ATCAATGGAATCTTGCCTTTTATTTTGGGGAGATTCTCCTCTTCCCTCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATGGAATCTTGCCTTTTATTTTGGGGAGATTCTCCTCTTCCCTCTA  800

seq1  CTATCCTATGAGAATGGGAGCAGACGTTTCTCAGCTGTAAGCAGCTGCCG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCTATGAGAATGGGAGCAGACGTTTCTCAGCTGTAAGCAGCTGCCG  850

seq1  CCTTGTTCTATTGTAGAAAGGCTTTCGAACCTGCCACTCTATCCTTGTCA  900
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CCTTGTTCTATTGTAG-AAGGCTTTCGAACCTGCCACTCTATCCTTGTCA  899

seq1  GCATCTGCAGCATGAAGCTATTGTTTTTTCATTACGTAATTCCCCACACC  950
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GCATCTGCAGCATGAAGCTATTGTTTTTTCATTACGTAATT-CCCACACC  948

seq1  CATTTCCCCTCTGTCTTCCTTTCTCCTTTGATTTTTGTCCTTGCATGTTC  1000
      |||||||||||||  |||||||||||||||| ||||||||||||||| ||
seq2  CATTTCCCCTCTG--TTCCTTTCTCCTTTGA-TTTTGTCCTTGCATG-TC  994

seq1  CTCACCTTATATTCTCTCTTTTCCTGGTGAGCTCTATGTGCCAGGGCTAA  1050
      |||||||||||||||||||||||   ||||||||||| |||||||||| |
seq2  CTCACCTTATATTCTCTCTTTTC--TGTGAGCTCTATTTGCCAGGGCTTA  1042

seq1  AT-AGAATCCCATGGTTAAAAATAGTTCCTGGCATTGTGATGCCTAAGAA  1099
      || ||||||| |||  | ||||||||| ||||||||| |||| |||   |
seq2  ATAAGAATCCAATG--TTAAAATAGTT-CTGGCATTGGGATG-CTA--GA  1086

seq1  GTGGTGTCTCCAATCATTTCCTCACATGTGATTC  1133
      |||||||||| | ||||||||||||| |||||||
seq2  GTGGTGTCTCTATTCATTTCCTCACAGGTGATTC  1120