BAC Information

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BAC

Clone NameB6Ng01-148F08
Chromosome1 (Build37)
Map Location 178,869,831 - 178,988,538
singlet/doubletdoublet
Overlap geneSdccag8, Akt3
Upstream genePld5, B020018G12Rik, Cep170, LOC666235
Downstream geneZfp238, EG631449, LOC100040770, 1700016C15Rik, Adss, EG631584, EG545391
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148F08.bB6Ng01-148F08.g
ACCDH944977DH944978
length1,1281,110
definitionDH944977|Mus musculus domesticus DNA, BAC clone: B6Ng01-148F08, 5' end.DH944978|Mus musculus domesticus DNA, BAC clone: B6Ng01-148F08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(178,869,831 - 178,870,972)(178,987,434 - 178,988,538)
sequence
gaattcattttttagtgtggagctttgggtacatggtactttaaaaggcc
agagatgtgcttcacagttcatggtaactttgtccaacaatcgtttaatg
catcacccacccactcctgccctgggccaatgagagaaagtgaaacagaa
aactagtcaagtgcacatttgatggccatttagcctgagtatgtacctgt
ggttcctaccacatctaaagaagccattgtggaaattgctcttactattg
ctgtagtaataagtgcttccctgcttctaatgctgtccctcctccatctg
ttccctcactgccgccagagtgatctttctcaagcacgggtgtgatcaca
acactctcctgcttaaaaccctacattggctccctagttccctcgggatg
agggccttaaaaatagcttcaagttctggctcctgcttccatctctagtc
tcatctttcttcagtaatctcccctccaccaactgctcactgctacccca
caacatacacactccagcctccgattgtgccagatgattttggttttccg
caggcacctggctccccctcttccccgggtctgtgcacatgctggccaca
ctctgtagtcactcactggcctgtcacggtgttctccccggcctttgtaa
gttcaagttctactcagactgagtctttgcttgtataagcctcctggcag
tactcctctctgtccctagccactccctcactcctgtttcatggacccga
gtaagggagtcgggatctagccctatttcaatgcttactacactctggta
gctttgcactttaaagaataaaaacattgtttattttgttgactacgcta
gaaatcctttccagggcatggtctgttctttgtgtattggcacatcttgg
tacatttgtgtttctcataaagaagttgcctaagtgtttgctggattagc
attacactacttgagaaacactcgtccctgtatataggcggtgttgtgga
atggaaagggcactggacttggagtgagacagtcttctcgctctgctagt
actagttctacaggtggctttgagcacattctctttggaggcgcaaaggt
gcttcatgcttagagcctgcagtcttgt
gaattctttctgttctgttcacatctgtgaccttagccaaaagacatatc
aacaagataactgcttagagactaaagttatctagaagtgtcttcgcttg
tctgtgtgcactgctgctaggtgcccagtgaaagctattcaagttgttga
cagaagcacttacagcctccctgtggcttaggtgtcttcaaaatggccag
ggttctttggcctagcaagtgtcctcggaacaaatgagaagcaaccttgt
gctcactccctcctcccctctctcccttttattttcaatttagttaactg
tttaaaattctatttaaaaatttatttatattttatcatttggatatagt
tcacatgtcatataaaattttaagtcaacatttactttttcaaatgttta
aagttgtgcaactatcgcttgtaattctaacatgttttaatcattccaat
tatgacttcacttttattagcttctcattctttctttctagctattgtaa
attatctttctctttgaagcattttctgaccatttcatgtaaataaaatt
atatgataaggagctttgtaggtccggctctttcccttagcagattataa
ctctcacctatattgttgtacctatggcttggttttcatgaaaaatactg
ctaagatcattcatatgtcatctcatttcctggccttttttcataagctc
cacatcgctttggtcatatgcttatttcttgaaacagatgtaacccttcc
caggttaaactagctctggcatagagtattcctcccactgtaaagaagtg
tgtgagattggagtcactgcagaagattttgagtagcagaatcttccaca
gagaggtgattgaggaaagggacaattgctcagatctgagtgctaaagga
cgaggaaaccaacatgggagagttttgccccgcaagcagccagaaagaac
aggagccagactaatggggcacctcctcagaagtgaagcaagggcacttg
ggttgatgttattgaagagccttcttagatgagcaggacttctgtcatca
agcatcacttgtttgttcctgtgtatttggggataataatatgaaacagt
gaaattcatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_178869831_178870972
seq2: B6Ng01-148F08.b_51_1178

seq1  GAATTCATTTTTTAGTGTGGAGCTTTGGGTACATGGTACTTTAAAAGGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTTTTAGTGTGGAGCTTTGGGTACATGGTACTTTAAAAGGCC  50

seq1  AGAGATGTGCTTCACAGTTCATGGTAACTTTGTCCAACAATCGTTTAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATGTGCTTCACAGTTCATGGTAACTTTGTCCAACAATCGTTTAATG  100

seq1  CATCACCCACCCACTCCTGCCCTGGGCCAATGAGAGAAAGTGAAACAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACCCACCCACTCCTGCCCTGGGCCAATGAGAGAAAGTGAAACAGAA  150

seq1  AACTAGTCAAGTGCACATTTGATGGCCATTTAGCCTGAGTATGTACCTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAGTCAAGTGCACATTTGATGGCCATTTAGCCTGAGTATGTACCTGT  200

seq1  GGTTCCTACCACATCTAAAGAAGCCATTGTGGAAATTGCTCTTACTATTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCCTACCACATCTAAAGAAGCCATTGTGGAAATTGCTCTTACTATTG  250

seq1  CTGTAGTAATAAGTGCTTCCCTGCTTCTAATGCTGTCCCTCCTCCATCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGTAATAAGTGCTTCCCTGCTTCTAATGCTGTCCCTCCTCCATCTG  300

seq1  TTCCCTCACTGCCGCCAGAGTGATCTTTCTCAAGCACGGGTGTGATCACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTCACTGCCGCCAGAGTGATCTTTCTCAAGCACGGGTGTGATCACA  350

seq1  ACACTCTCCTGCTTAAAACCCTACATTGGCTCCCTAGTTCCCTCGGGATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCTCCTGCTTAAAACCCTACATTGGCTCCCTAGTTCCCTCGGGATG  400

seq1  AGGGCCTTAAAAATAGCTTCAAGTTCTGGCTCCTGCTTCCATCTCTAGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCCTTAAAAATAGCTTCAAGTTCTGGCTCCTGCTTCCATCTCTAGTC  450

seq1  TCATCTTTCTTCAGTAATCTCCCCTCCACCAACTGCTCACTGCTACCCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTTTCTTCAGTAATCTCCCCTCCACCAACTGCTCACTGCTACCCCA  500

seq1  CAACATACACACTCCAGCCTCCGATTGTGCCAGATGATTTTGGTTTTCCG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATACACACTCCAGCCTCCGATTGTGCCAGATGATTTTGGTTTTCCG  550

seq1  CAGGCACCTGGCTCCCCCTCTTCCCCGGGTCTGTGCACATGCTGGCCACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCACCTGGCTCCCCCTCTTCCCCGGGTCTGTGCACATGCTGGCCACA  600

seq1  CTCTGTAGTCACTCACTGGCCTGTCACGGTGTTCTCCCCGGCCTTTGTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTAGTCACTCACTGGCCTGTCACGGTGTTCTCCCCGGCCTTTGTAA  650

seq1  GTTCAAGTTCTACTCAGACTGAGTCTTTGCTTGTATAAGCCTCCTGGCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAAGTTCTACTCAGACTGAGTCTTTGCTTGTATAAGCCTCCTGGCAG  700

seq1  TACTCCTCTCTGTCCCTAGCCACTCCCTCACTCCTGTTTCATGGACCCGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCCTCTCTGTCCCTAGCCACTCCCTCACTCCTGTTTCATGGACCCGA  750

seq1  GTAAGGGAGTCGGGATCTAGCCCTATTTCAATGCTTACTACACTCTGGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGGGAGTCGGGATCTAGCCCTATTTCAATGCTTACTACACTCTGGTA  800

seq1  GCTTTGCACTTTAAAGAATAAAAACATTGTTTATTTTGTTGACTACGCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGCACTTTAAAGAATAAAAACATTGTTTATTTTGTTGACTACGCTA  850

seq1  GAAATCC-TTCCAGGGCATGGTCTGTTCTTTGTGTACTGGCACATCTTGG  899
      ||||||| |||||||||||||||||||||||||||| |||||||||||||
seq2  GAAATCCTTTCCAGGGCATGGTCTGTTCTTTGTGTATTGGCACATCTTGG  900

seq1  TACATTTGTGTTTCTCATAAAGAAGTTGCCTAAGTGTTTGCTGGATTAGC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTGTGTTTCTCATAAAGAAGTTGCCTAAGTGTTTGCTGGATTAGC  950

seq1  ATTACACTACTTGAGGAAACACTCGTTCCCTGTATATAAGGCGGTGTTGT  999
      |||||||||||||| |||||||||| ||||||||||| ||||||||||||
seq2  ATTACACTACTTGA-GAAACACTCG-TCCCTGTATAT-AGGCGGTGTTGT  997

seq1  GGAATGGAAAGGGCACTGGACTTGGAGGTGGAAGACAGGTCTCCTCGCTC  1049
      |||||||||||||||||||||||||| |||  ||||| |||| |||||||
seq2  GGAATGGAAAGGGCACTGGACTTGGA-GTG--AGACA-GTCTTCTCGCTC  1043

seq1  TGCTAGTTAACTAGTTCTACAGGTGGCTTTGAGCACATCCTCTTGTGAGG  1099
      |||||||  ||||||||||||||||||||||||||||| |||||  ||||
seq2  TGCTAGT--ACTAGTTCTACAGGTGGCTTTGAGCACATTCTCTTTGGAGG  1091

seq1  CGGCAAAGGTGGCTCCATGGCTAAGAGAGCCTGCAGCTCTTGT  1142
      | |||||||| ||| ||||  |   ||||||||||| ||||||
seq2  C-GCAAAGGT-GCTTCATGCTT---AGAGCCTGCAG-TCTTGT  1128

seq1: chr1_178987434_178988538
seq2: B6Ng01-148F08.g_70_1179 (reverse)

seq1  AATGAATTTCACTGTTTCATATTATTAT-CCCAAATACCACAGGAACAAA  49
      |||||||||||||||||||||||||||| |||||||| ||||||||||||
seq2  AATGAATTTCACTGTTTCATATTATTATCCCCAAATA-CACAGGAACAAA  49

seq1  CAAAGTGATGCTTGATGACAGAAGTCCTGCTCATCTAAGAAGGCTC-TCA  98
      | |||||||||||||||||||||||||||||||||||||||||||| |||
seq2  C-AAGTGATGCTTGATGACAGAAGTCCTGCTCATCTAAGAAGGCTCTTCA  98

seq1  ATAACATCAACCACAGTG-CCTTGCTTCAC-TCTGAGG-GGTGCCCCATT  145
      ||||||||||||  |||| ||||||||||| ||||||| |||||||||||
seq2  ATAACATCAACCCAAGTGCCCTTGCTTCACTTCTGAGGAGGTGCCCCATT  148

seq1  AGTCTGGCTCCTGTTCCTTCTGGCTGCCTTGC-GTGCAAAACTCT-CCAT  193
      |||||||||||||||| ||||||||| ||||| | |||||||||| ||||
seq2  AGTCTGGCTCCTGTTCTTTCTGGCTG-CTTGCGGGGCAAAACTCTCCCAT  197

seq1  GTTGGTTTCCTCGTCC-TTAGCACTCAGATCTGAGCAATTGTCCCTTTCC  242
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GTTGGTTTCCTCGTCCTTTAGCACTCAGATCTGAGCAATTGTCCCTTTCC  247

seq1  TCAATCACCTCTCTGTGGAAGATTCTGCTACTCAAATTCTTCTGCAGTGA  292
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TCAATCACCTCTCTGTGGAAGATTCTGCTACTCAAAATCTTCTGCAGTGA  297

seq1  CTCCAATCTCACACACTTCTTTACAGTGGGAGGAATACTCTATGCCAGAG  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAATCTCACACACTTCTTTACAGTGGGAGGAATACTCTATGCCAGAG  347

seq1  CTAGTTTAACCTGGGAAGGGTTACATCTGTTTCAAGAAATAAGCATATGA  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTTAACCTGGGAAGGGTTACATCTGTTTCAAGAAATAAGCATATGA  397

seq1  CCAAAGCGATGTGGAGCTTATGAAAAAAGGCCAGGAAATGAGATGACATA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGCGATGTGGAGCTTATGAAAAAAGGCCAGGAAATGAGATGACATA  447

seq1  TGAATGATCTTAGCAGTATTTTTCATGAAAACCAAGCCATAGGTACAACA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGATCTTAGCAGTATTTTTCATGAAAACCAAGCCATAGGTACAACA  497

seq1  ATATAGGTGAGAGTTATAATCTGCTAAGGGAAAGAGCCGGACCTACAAAG  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGGTGAGAGTTATAATCTGCTAAGGGAAAGAGCCGGACCTACAAAG  547

seq1  CTCCTTATCATATAATTTTATTTACATGAAATGGTCAGAAAATGCTTCAA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTATCATATAATTTTATTTACATGAAATGGTCAGAAAATGCTTCAA  597

seq1  AGAGAAAGATAATTTACAATAGCTAGAAAGAAAGAATGAGAAGCTAATAA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAAGATAATTTACAATAGCTAGAAAGAAAGAATGAGAAGCTAATAA  647

seq1  AAGTGAAGTCATAATTGGAATGATTAAAACATGTTAGAATTACAAGCGAT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAAGTCATAATTGGAATGATTAAAACATGTTAGAATTACAAGCGAT  697

seq1  AGTTGCACAACTTTAAACATTTGAAAAAGTAAATGTTGACTTAAAATTTT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGCACAACTTTAAACATTTGAAAAAGTAAATGTTGACTTAAAATTTT  747

seq1  ATATGACATGTGAACTATATCCAAATGATAAAATATAAATAAATTTTTAA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGACATGTGAACTATATCCAAATGATAAAATATAAATAAATTTTTAA  797

seq1  ATAGAATTTTAAACAGTTAACTAAATTGAAAATAAAAGGGAGAGAGGGGA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAATTTTAAACAGTTAACTAAATTGAAAATAAAAGGGAGAGAGGGGA  847

seq1  GGAGGGAGTGAGCACAAGGTTGCTTCTCATTTGTTCCGAGGACACTTGCT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGAGTGAGCACAAGGTTGCTTCTCATTTGTTCCGAGGACACTTGCT  897

seq1  AGGCCAAAGAACCCTGGCCATTTTGAAGACACCTAAGCCACAGGGAGGCT  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCAAAGAACCCTGGCCATTTTGAAGACACCTAAGCCACAGGGAGGCT  947

seq1  GTAAGTGCTTCTGTCAACAACTTGAATAGCTTTCACTGGGCACCTAGCAG  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGTGCTTCTGTCAACAACTTGAATAGCTTTCACTGGGCACCTAGCAG  997

seq1  CAGTGCACACAGACAAGCGAAGACACTTCTAGATAACTTTAGTCTCTAAG  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCACACAGACAAGCGAAGACACTTCTAGATAACTTTAGTCTCTAAG  1047

seq1  CAGTTATCTTGTTGATATGTCTTTTGGCTAAGGTCACAGATGTGAACAGA  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTATCTTGTTGATATGTCTTTTGGCTAAGGTCACAGATGTGAACAGA  1097

seq1  ACAGAAAGAATTC  1105
      |||||||||||||
seq2  ACAGAAAGAATTC  1110