BAC Information

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BAC

Clone NameB6Ng01-148F09
Chromosome1 (Build37)
Map Location 164,247,373 - 164,365,178
singlet/doubletdoublet
Overlap geneDnm3
Upstream geneTnfsf4, Tnfsf18, EG435650, LOC100039623, LOC269134, Fasl, AI848100, EG665109, Pigc, LOC100039703, Dnm3os
Downstream gene5630401D24Rik, Vamp4, LOC435651, Myoc, Bat2d, Fmo4, Fmo1, Fmo2, Fmo6, Fmo3, 4921528O07Rik, Prrx1, LOC100039597, Scyl1bp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148F09.bB6Ng01-148F09.g
ACCDH944979DH944980
length1,119470
definitionDH944979|Mus musculus domesticus DNA, BAC clone: B6Ng01-148F09, 5' end.DH944980|Mus musculus domesticus DNA, BAC clone: B6Ng01-148F09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(164,364,062 - 164,365,178)(164,247,373 - 164,247,842)
sequence
gaattctacaatggtccgggtatctgtaataaaattagaatcacagctta
cgattggttggctatggttagaatttgatgtcagatggaacagaatggca
tcttatcttttatagcccgagtgttaagccaggaagtgattggtaatgaa
tgcttgcttagtaatttcgtttctaaaacatctgattaatgagcaccctg
taaacattacttcagatgcatgcacatctctgataggggttatttctcac
cccagaactctctttattttccttctccttcttgttagtttaacgtttga
aagaggcaccgcacatctctgcagaatgttatttcctttgcttattataa
aactatattctaatgtgatgtgtgattggggactaacattatcattaagc
acaaggacaggagaaggtcagtttgtcaggctgcttaattatcagggaaa
ccattgctctgtgaatgggaaagatgtgagtgggtcaccttctgcaaaac
gagaaacagcccccattaaggagtcaggctactggaaatggtgcacttat
ccataaagtcatgggactcaacgactgtttcgttacgttttaagactcct
acagccaggccatgttcctctgacttactagttttcatttcaagcctttg
atatttttcttcttctggtacctatagctggacatcagttcacttattat
aatataataagtatctaggcaaagctaagtagtgaaatttttcttttact
ttatcactaaagaattttgcttgtaagtgtgttgaaaaaatagaagggta
acatcgtagttacaataaggattaggaggcacatctccggtcatacaatg
gacattaaatgggagaatgcatgatgtcattctgttaaagactctctgct
agagaaagaggaaatgatattatcttcctacagacaaactcagtagctag
ttagaaacacttataaaagtttcccaatgcgcacaaaagctgagcgaaat
gcgcgaaatgacgatgagtgggaatcctctagcatcttgaatttgctgga
aagaaattgtgctgtaagaggaagggagtcattgacaagtgtgaagggga
gctccgtctacatcttcct
gaattcttgtctccctcactgcctgccatgaagcttgcaggcacacacgc
ggtgaagacacaggaagaaaagaatcttacttaccacaaagtggttgaat
gaaaaaataaaggaattaaattttgcttgggggtataagaaataaagtgc
cacaaggtcaaccagggaaatggtttagttgcttaaaatgtttccacaca
agtaagaggagctgagttcagacccctagtacctacataaaaagccaggc
ccagtaccatacacctataatcccactattggagcagggaagataggagt
ctctcttgagcttcttagctagtttagctaaattgatgagctcctggttc
agtgagagatactgtctcaaagaataagatagagagcaattaaagaagac
atcaatgttaacctctgacctactctttctctctctctctctctctctct
ctctctctctctctctctca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_164364062_164365178
seq2: B6Ng01-148F09.b_44_1162 (reverse)

seq1  AGGAAGA--CAGCAGGAGCTCCCC-TCCCACTTGTCAATGGACTCCCTCC  47
      |||||||   ||  |||||||||| || ||||||||||| |||||||| |
seq2  AGGAAGATGTAGACGGAGCTCCCCTTCACACTTGTCAAT-GACTCCCTTC  49

seq1  TCCTTACAGCACAA-TTCTCTCCAGCCAATGTCAGGATGCTAGAGGA-TC  95
        |||||||||||| |||| |||||| ||| ||| |||||||||||| ||
seq2  CTCTTACAGCACAATTTCTTTCCAGCAAAT-TCAAGATGCTAGAGGATTC  98

seq1  CCAC-CACCGTCATTTCCCGCATCTGCGC-CAGC-TCTGTGCGTATTGGG  142
      |||| || ||||||||| ||||| | ||| |||| | |||||| ||||||
seq2  CCACTCATCGTCATTTCGCGCAT-TTCGCTCAGCTTTTGTGCGCATTGGG  147

seq1  AAACCTTTATAAGTGTTTC-AAATAGCTACTGAGTTTGTTCTCTAGGAAA  191
      |||| |||||||||||||| || ||||||||||||||| ||| |||||| 
seq2  AAACTTTTATAAGTGTTTCTAACTAGCTACTGAGTTTG-TCTGTAGGAAG  196

seq1  ATAATATCATTTCCTCTTTCTCTAGCAGAGAATTCTCTAACAGAATGACT  241
      |||||||||||||||||||||||||||||| | ||| |||||||||||| 
seq2  ATAATATCATTTCCTCTTTCTCTAGCAGAG-AGTCTTTAACAGAATGACA  245

seq1  TCATGCATTCTCCCATTTAATGTCCATTGTATAACCGGAGATCTGCCTCC  291
      |||||||||||||||||||||||||||||||| ||||||||| |||||||
seq2  TCATGCATTCTCCCATTTAATGTCCATTGTATGACCGGAGATGTGCCTCC  295

seq1  TAAACCCTATTGTAAATATGATGTTACCCTTCTTATTTTTCAACACACTT  341
      ||| || |||||||| || ||||||||||||||  |||||||||||||||
seq2  TAATCCTTATTGTAACTACGATGTTACCCTTCTATTTTTTCAACACACTT  345

seq1  CACAAGCAAAATTCTTTAGTGATAAAGTAAAAGAAAAATTTCTACTACTT  391
       ||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  -ACAAGCAAAATTCTTTAGTGATAAAGTAAAAGAAAAATTTC-ACTACTT  393

seq1  AGCTTTGCCTAGATACTTATTATATTATAATAAGTGAACTGATTTCCAGC  441
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AGCTTTGCCTAGATACTTATTATATTATAATAAGTGAACTGATGTCCAGC  443

seq1  TATAGGTAACAGAAGAAGAAAAATATCAAAGGTTTGAAATGAAAACTTGT  491
      |||||||| ||||||||||||||||||||||| |||||||||||||| ||
seq2  TATAGGTACCAGAAGAAGAAAAATATCAAAGGCTTGAAATGAAAACTAGT  493

seq1  AAGTCAGAGGAACATGGCCTGGCTGTAGGAGTCTTAAAACGTAACGAAAC  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAGAGGAACATGGCCTGGCTGTAGGAGTCTTAAAACGTAACGAAAC  543

seq1  AGTCGTTGAGTCCCATGACTTTATGGATAAGTGCACCATTTCCAGTAGCC  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCGTTGAGTCCCATGACTTTATGGATAAGTGCACCATTTCCAGTAGCC  593

seq1  TGACTCCCTAATGGGGGCTGTTTCTCGCTTTGCAGAAGGTGACCCACTCA  641
      ||||||| ||||||||||||||||||| ||||||||||||||||||||||
seq2  TGACTCCTTAATGGGGGCTGTTTCTCGTTTTGCAGAAGGTGACCCACTCA  643

seq1  CATCTTTCCCCTTCACAGAGCAATGGTTTCCCTGATAATTAAGCAGCCTG  691
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CATCTTTCCCATTCACAGAGCAATGGTTTCCCTGATAATTAAGCAGCCTG  693

seq1  ACAAACTGACCTTCTCCTGTCCTTGTGCTTAATGATAATGTTAGTCCCCA  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACTGACCTTCTCCTGTCCTTGTGCTTAATGATAATGTTAGTCCCCA  743

seq1  ATCACACATCACATTAGAATATAGTTCTATAATAAGCAAAGGAAATAACA  791
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  ATCACACATCACATTAGAATATAGTTTTATAATAAGCAAAGGAAATAACA  793

seq1  TTCTGCAGAGATGTGCGGTGCCTCTTTCAAACGTTAAACTAACAAGAAGG  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCAGAGATGTGCGGTGCCTCTTTCAAACGTTAAACTAACAAGAAGG  843

seq1  AGAAGGAAAATAAAGAGAGTTCTGGGGTGAGAAATAACCCCTATCAGAGA  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGAAAATAAAGAGAGTTCTGGGGTGAGAAATAACCCCTATCAGAGA  893

seq1  TCTGCATGCATCTGAAGTAATGTTTACAGGGTGCTCATTAATCAGATGTC  941
      | ||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TGTGCATGCATCTGAAGTAATGTTTACAGGGTGCTCATTAATCAGATGTT  943

seq1  TTAGAAACGAAATTACTAAGCAAGCATTCATTACCAATCACTTCCTGGCT  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAACGAAATTACTAAGCAAGCATTCATTACCAATCACTTCCTGGCT  993

seq1  TAACACTCGGGCTATAAAAGATAAGATGCCATTCTGTTCCATCTGACATC  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACTCGGGCTATAAAAGATAAGATGCCATTCTGTTCCATCTGACATC  1043

seq1  AAATTCTAACCATAGCCAACCAATCGTAAGCTGTGATTCTAATTCTATTA  1091
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AAATTCTAACCATAGCCAACCAATCGTAAGCTGTGATTCTAATTTTATTA  1093

seq1  CAGATACCCGGACCATTCTAGAATTC  1117
      ||||||||||||||||| ||||||||
seq2  CAGATACCCGGACCATTGTAGAATTC  1119

seq1: chr1_164247373_164247842
seq2: B6Ng01-148F09.g_68_537

seq1  GAATTCTTGTCTCCCTCACTGCCAGCCATGAAGCTTGCAGGCACACACAC  50
      ||||||||||||||||||||||| |||||||||||||||||||||||| |
seq2  GAATTCTTGTCTCCCTCACTGCCTGCCATGAAGCTTGCAGGCACACACGC  50

seq1  AGTGAAGACACAGGAAGAAAAGAATCTTACTTACCACAAAGTGGTTGAAT  100
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAAGACACAGGAAGAAAAGAATCTTACTTACCACAAAGTGGTTGAAT  100

seq1  GAAAAAATAAAGGAATTAAATTTTGCTTGGGGGTATAAGAAATAAAGTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAATAAAGGAATTAAATTTTGCTTGGGGGTATAAGAAATAAAGTGC  150

seq1  CACAAGGTCAACCAGGGAAATGGTTTAGTTGCTTAAAATGTTTCCACACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGGTCAACCAGGGAAATGGTTTAGTTGCTTAAAATGTTTCCACACA  200

seq1  AGTAAGAGGAGCTGAGTTCAGACCCCTAGTACCTACATAAAAAGCCAGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGAGGAGCTGAGTTCAGACCCCTAGTACCTACATAAAAAGCCAGGC  250

seq1  CCAGTACCATACACCTATAATCCCACTATTGGAGCAGGGAAGATAGGAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTACCATACACCTATAATCCCACTATTGGAGCAGGGAAGATAGGAGT  300

seq1  CTCTCTTGAGCTTCTTAGCTAGTTTAGCTAAATTGATGAGCTCCTGGTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTTGAGCTTCTTAGCTAGTTTAGCTAAATTGATGAGCTCCTGGTTC  350

seq1  AGTGAGAGATACTGTCTCAAAGAATAAGATAGAGAGCAATTAAAGAAGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGAGATACTGTCTCAAAGAATAAGATAGAGAGCAATTAAAGAAGAC  400

seq1  ATCAATGTTAACCTCTGACCTACTCTTTCTCTCTCTCTCTCTCTCTCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATGTTAACCTCTGACCTACTCTTTCTCTCTCTCTCTCTCTCTCTCT  450

seq1  CTCTCTCTCTCTCTCTCTCA  470
      ||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCA  470