BAC Information

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BAC

Clone NameB6Ng01-148H09
Chromosome1 (Build37)
Map Location 64,074,874 - 64,076,002
singlet/doubletsinglet
Overlap genenone
Upstream geneA430093A21Rik, Ndufs1, Eef1b2, Gpr1, 1700039I01Rik, 4930431J08Rik, LOC667644, LOC100042638, Adam23, Gm215, Mdh1b, Fastkd2, 4933402D24Rik, LOC671842, OTTMUSG00000013918
Downstream geneKlf7, Ppia-ps1_583.1, LOC100043124, Creb1, 2310038H17Rik, Ccnyl1, Fzd5, 9430067K14Rik, LOC667245, LOC100043141, 4921521F21Rik, LOC667276
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148H09.b
ACCDH945066
length1,123
definitionDH945066|Mus musculus domesticus DNA, BAC clone: B6Ng01-148H09, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccacagctctcctgctgtgtcttccctcactggtcaagttgctgc
ctctcaccctacatctgaactactcacctgcttagaggtggtatctgaga
attaaactttcaaaagcatttctctggttccaagcaccttctgtttccct
cactgggctttgaagtgaaaaaaacagtatcacccatctatctcttggca
gctcccagcccactcctcccggttcttgtagcaggttcagtccctgtagc
catggtttctaatgtgaacacttattgatgttttccttcaggtttatgtg
actagggatagagggttttagccatcatatccattttagagacccaggag
cataagaaacctccaggagctttgtgtgccttgggacagtatttattatt
gcttacagttaataatactgctgacgccgggagaccagtgggtttaggga
tactgcatcctctgcattcttgcctaccttgatgcacctttcaaaagtcc
agcactgaatcaatgttagtagtaggctcttccttctaagaattctctca
aatctctcctttcttttgcttcgtagggtgcttgtatctgtatctgtcct
ggagtcacctgcattttcctgccctgcttggtcacttcctgttctttctc
acccactgttgcttgtacatattccctcatccttaccccagggattccct
caaccctcatcccgccatgccttctctacaaaccgctccaaatgatcctt
tctaaacacactcctggttaatatgagcacagagcaaactgccccttttc
cctcatcaaataacctgctttcaataagcctcacccagctccctaaacaa
ataccattccataatcaacctcattctaaaatattgcttttcataacctc
taaccattttctatttctcctttagtcacagaaaacatgaagaacacaca
ggcacactcaagtgtgtgtgcacatcaactcacacatgcacgtgcccatg
gtacatactgcagaaaaaatgacactttttgcttccccttcccaagaaaa
gaaaattgtttggagacatatggatcatttggtgtctaatttgaggattc
ttttcctttacgaaatgaactga
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_64074874_64076002
seq2: B6Ng01-148H09.b_47_1169

seq1  GAATTCCACAGCTCTCCTGCTGTGTCTTCCCTCACTGGTCAAGTTGCTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACAGCTCTCCTGCTGTGTCTTCCCTCACTGGTCAAGTTGCTGC  50

seq1  CTCTCACCCTACATCTGAACTACTCACCTGCTTAGAGGTGGTATCTGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCACCCTACATCTGAACTACTCACCTGCTTAGAGGTGGTATCTGAGA  100

seq1  ATTAAACTTTCAAAAGCATTTCTCTGGTTCCAAGCACCTTCTGTTTCCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAACTTTCAAAAGCATTTCTCTGGTTCCAAGCACCTTCTGTTTCCCT  150

seq1  CACTGGGCTTTGAAGTGAAAAAAACAGTATCACCCATCTATCTCTTGGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGGCTTTGAAGTGAAAAAAACAGTATCACCCATCTATCTCTTGGCA  200

seq1  GCTCCCAGCCCACTCCTCCCGGTTCTTGTAGCAGGTTCAGTCCCTGTAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCAGCCCACTCCTCCCGGTTCTTGTAGCAGGTTCAGTCCCTGTAGC  250

seq1  CATGGTTTCTAATGTGAACACTTATTGATGTTTTCCTTCAGGTTTATGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTTTCTAATGTGAACACTTATTGATGTTTTCCTTCAGGTTTATGTG  300

seq1  ACTAGGGATAGAGGGTTTTAGCCATCATATCCATTTTAGAGACCCAGGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGGGATAGAGGGTTTTAGCCATCATATCCATTTTAGAGACCCAGGAG  350

seq1  CATAAGAAACCTCCAGGAGCTTTGTGTGCCTTGGGACAGTATTTATTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGAAACCTCCAGGAGCTTTGTGTGCCTTGGGACAGTATTTATTATT  400

seq1  GCTTACAGTTAATAATACTGCTGACGCCGGGAGACCAGTGGGTTTAGGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTACAGTTAATAATACTGCTGACGCCGGGAGACCAGTGGGTTTAGGGA  450

seq1  TACTGCATCCTCTGCATTCTTGCCTACCTTGATGCACCTTTCAAAAGTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCATCCTCTGCATTCTTGCCTACCTTGATGCACCTTTCAAAAGTCC  500

seq1  AGCACTGAATCAATGTTAGTAGTAGGCTCTTCCTTCTAAGAATTCTCTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTGAATCAATGTTAGTAGTAGGCTCTTCCTTCTAAGAATTCTCTCA  550

seq1  AATCTCTCCTTTCTTTTGCTTCGTAGGGTGCTTGTATCTGTATCTGTCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCTCCTTTCTTTTGCTTCGTAGGGTGCTTGTATCTGTATCTGTCCT  600

seq1  GGAGTCACCTGCATTTTCCTGCCCTGCTTGGTCACTTCCTGTTCTTTCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTCACCTGCATTTTCCTGCCCTGCTTGGTCACTTCCTGTTCTTTCTC  650

seq1  ACCCACTGTTGCTTGTACATATTCCCTCATCCTTACCCCAGGGATTCCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACTGTTGCTTGTACATATTCCCTCATCCTTACCCCAGGGATTCCCT  700

seq1  CAACCCTCATCCCGCCATGCCTTCTCTACAAACCGCTCCAAATGATCCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCCTCATCCCGCCATGCCTTCTCTACAAACCGCTCCAAATGATCCTT  750

seq1  TCTAAACACACTCCTGGTTAATATGAGCACAGAGCAAACTGCCCCTTTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAACACACTCCTGGTTAATATGAGCACAGAGCAAACTGCCCCTTTTC  800

seq1  CCTCATCAAATAACCTGCTTTCAATAAGCCTCACCCAGCTCCCTAAACAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATCAAATAACCTGCTTTCAATAAGCCTCACCCAGCTCCCTAAACAA  850

seq1  ATACCATTCCATAATCAACCTCATTCTAAAATATTGCTTTTCATAACCTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCATTCCATAATCAACCTCATTCTAAAATATTGCTTTTCATAACCTC  900

seq1  TAACCATTTGCTATTTCTCCTTTAGTTCACAGAAAACATGAAGAACACAC  950
      ||||||||| ||||||||||||||| ||||||||||||||||||||||||
seq2  TAACCATTTTCTATTTCTCCTTTAG-TCACAGAAAACATGAAGAACACAC  949

seq1  AGGCACACTCAGGTGTGTGTGCACATCAACTCACACATGCACGTGCCCAT  1000
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AGGCACACTCAAGTGTGTGTGCACATCAACTCACACATGCACGTGCCCAT  999

seq1  -GTACATACTGCCAGAGAAAAATGACACTTTTTGCTTCCCCTTCCCAAGA  1049
       |||||||||| |||| |||||||||||||||||||||||||||||||||
seq2  GGTACATACTG-CAGA-AAAAATGACACTTTTTGCTTCCCCTTCCCAAGA  1047

seq1  AAGAAAATTTGTTTGAAGGACATAAGGAATCATTT-GTGTCT-ATTTGAG  1097
      ||  ||| ||||||| | |||||| || ||||||| |||||| |||||||
seq2  AAAGAAAATTGTTTGGA-GACATATGG-ATCATTTGGTGTCTAATTTGAG  1095

seq1  GATTTTCTTTTTCCCCTAACGAAATGAGCTGA  1129
      ||  |||||||  || | ||||||||| ||||
seq2  GA--TTCTTTT--CCTTTACGAAATGAACTGA  1123