BAC Information

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BAC

Clone NameB6Ng01-148J24
Chromosome1 (Build37)
Map Location 120,307,949 - 120,494,175
singlet/doubletdoublet
Overlap geneClasp1
Upstream geneB020011L13Rik, LOC100041684, LOC636972, EG666785, EG634762, LOC100042368, LOC637083, Tsn, Mki67ip
Downstream geneTcfcp2l1, LOC100041753, Gli2, LOC666838, LOC100041778, Inhbb, Ralb, Tmem185b, Epb4.1l5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148J24.bB6Ng01-148J24.g
ACCDH945177DH945178
length6211,089
definitionDH945177|Mus musculus domesticus DNA, BAC clone: B6Ng01-148J24, 5' end.DH945178|Mus musculus domesticus DNA, BAC clone: B6Ng01-148J24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(120,493,555 - 120,494,175)(120,307,949 - 120,309,054)
sequence
gaattccaggtcagcaagggtacacagagaaaccttgtctataataataa
tcagcaacaacaaactataatggaagagtaatgtcccaaaacagcacagc
caggagctaggacttagagtagaaatgggagagactaggaaagctctggc
tcccgaggctgctctggcctggttctgttccctcagtcagcagatgctga
ggtaaactcttctcatgtctgtggttgttgttcccatcaggaaaattata
agaagaactggatggagagttgttttggtttataaaatcttatcactcat
ctgaacctgataagcatttttctctgaaaaaaaaaaagcccacctacaga
gaggggcttcaaaactcctcagaagggaagcacaagagctgtgcactcct
gaccagtgagtgggcttactgtcaagcttgagggcccgtgcttactccct
ggtatccacttgggagagagaactgtttcctacatggtcctccgagctct
gtggagtcactgccgcatgcatgccaccccccaccccaccccccacccac
acaagagactgacctactcattgggtagattggggatggcaggggcaaat
ggtgaggagtgggaggggctc
gaattctcatgattaaaaattaatcaagtattaggaataaagagctattt
ccatgatatgatgaaggccatctgtgaaaccccattagtgatgaaagact
gaatgctgtcctacaatctggagtaaaatgaggctttttttttttttttt
gccatgtctgcttggtgttgtacaggcaactaggagagaaaaaggaggac
aagatacacatattggaaaggaaaatttaaaactctgcttttgcagatga
cattattgtgtgttgaatattctgagtaatccattctaaggtattagaac
taatgaagacaacaaagtcagacttcagggtcaaggtcagtaaacaggat
cagctcctctgtgcctgcaaagagaatgtgaatggagctaagaaagcaag
tcttttaagaataacactaggggctattcttaaaagcacccgactgctct
tccgaaggtcaggagttcaaatcccagcaaccacatggtggctcacaacc
atccgtaacaagatctgactccctcttctggagtgtctgaggacagctac
agtgtacttacatataataaataaataaatctttaaaaaaaaaaagaata
acactaaagagaagagaaaactagggataagcacgagacgtgtttacctg
acctttggaattataaaatactacttagaaaatgaaagaccctggaaagc
ttgatctttgatcttgttttgagggcacactccacattggtgtccagatc
cagttacacactcggctgagatctcatacacctgtgttcacgagctgacg
tgttgattgtaaagttaatgtttgaaacgtgggagactcaaaagagcctt
ggtaaagaatagagtagaacactttcttagcttgctacaaagctatagta
attgaaaccagttccaatagactgaaggtagatatataaatcagtggaaa
gaatgagagtcagaaataattgaaatacttgtggcccattgatttttctt
ttaacagcagtaagagacaggttagtgatgcaagggatcgactctcatag
tatggtggacaagtagggtcctaatgcaacaatgtattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_120493555_120494175
seq2: B6Ng01-148J24.b_47_667 (reverse)

seq1  GAGCCCCTCCCACTCCTCACCATTTGCCCCTGCCATCCCCAATCTACCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCCCTCCCACTCCTCACCATTTGCCCCTGCCATCCCCAATCTACCCA  50

seq1  ATGAGTAGGTCAGTCTCTTGTGTGGGTGGGGGGTGGGGTGGGGGGTGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTAGGTCAGTCTCTTGTGTGGGTGGGGGGTGGGGTGGGGGGTGGCA  100

seq1  TGCATGCGGCAGTGACTCCACAGAGCTCGGAGGACCATGTAGGAAACAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGCGGCAGTGACTCCACAGAGCTCGGAGGACCATGTAGGAAACAGT  150

seq1  TCTCTCTCCCAAGTGGATACCAGGGAGTAAGCACGGGCCCTCAAGCTTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCCCAAGTGGATACCAGGGAGTAAGCACGGGCCCTCAAGCTTGA  200

seq1  CAGTAAGCCCACTCACTGGTCAGGAGTGCACAGCTCTTGTGCTTCCCTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAGCCCACTCACTGGTCAGGAGTGCACAGCTCTTGTGCTTCCCTTC  250

seq1  TGAGGAGTTTTGAAGCCCCTCTCTGTAGGTGGGCTTTTTTTTTTTCAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAGTTTTGAAGCCCCTCTCTGTAGGTGGGCTTTTTTTTTTTCAGAG  300

seq1  AAAAATGCTTATCAGGTTCAGATGAGTGATAAGATTTTATAAACCAAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGCTTATCAGGTTCAGATGAGTGATAAGATTTTATAAACCAAAAC  350

seq1  AACTCTCCATCCAGTTCTTCTTATAATTTTCCTGATGGGAACAACAACCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTCCATCCAGTTCTTCTTATAATTTTCCTGATGGGAACAACAACCA  400

seq1  CAGACATGAGAAGAGTTTACCTCAGCATCTGCTGACTGAGGGAACAGAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACATGAGAAGAGTTTACCTCAGCATCTGCTGACTGAGGGAACAGAAC  450

seq1  CAGGCCAGAGCAGCCTCGGGAGCCAGAGCTTTCCTAGTCTCTCCCATTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCAGAGCAGCCTCGGGAGCCAGAGCTTTCCTAGTCTCTCCCATTTC  500

seq1  TACTCTAAGTCCTAGCTCCTGGCTGTGCTGTTTTGGGACATTACTCTTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTAAGTCCTAGCTCCTGGCTGTGCTGTTTTGGGACATTACTCTTCC  550

seq1  ATTATAGTTTGTTGTTGCTGATTATTATTATAGACAAGGTTTCTCTGTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAGTTTGTTGTTGCTGATTATTATTATAGACAAGGTTTCTCTGTGT  600

seq1  ACCCTTGCTGACCTGGAATTC  621
      |||||||||||||||||||||
seq2  ACCCTTGCTGACCTGGAATTC  621

seq1: chr1_120307949_120309054
seq2: B6Ng01-148J24.g_71_1159

seq1  GAATTCTCATGATTAAAAATTAATCAAGTATTAGGAATAAAGAGCTATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATGATTAAAAATTAATCAAGTATTAGGAATAAAGAGCTATTT  50

seq1  CCATGATATGATGAAGGCCATCTGTGAAACCCCATTAGTGATGAAAGACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGATATGATGAAGGCCATCTGTGAAACCCCATTAGTGATGAAAGACT  100

seq1  GAATGCTGTCCTACAATCTGGAGTAAAATGAGGCTTTTTTTTTTTTTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCTGTCCTACAATCTGGAGTAAAATGAGGCTTTTTTTTTTTTTTTT  150

seq1  GCCATGTCTGCTTGGTGTTGTACAGGCAACTAGGAGAGAAAAAGGAGGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGTCTGCTTGGTGTTGTACAGGCAACTAGGAGAGAAAAAGGAGGAC  200

seq1  AAGATACACATATTGGAAAGGAAAATTTAAAACTCTGCTTTTGCAGATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATACACATATTGGAAAGGAAAATTTAAAACTCTGCTTTTGCAGATGA  250

seq1  CATTATTGTGTGTTGAATATTCTGAGTAATCCATTCTAAGGTATTAGAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATTGTGTGTTGAATATTCTGAGTAATCCATTCTAAGGTATTAGAAC  300

seq1  TAATGAAGACAACAAAGTCAGACTTCAGGGTCAAGGTCAGTAAACAGGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAAGACAACAAAGTCAGACTTCAGGGTCAAGGTCAGTAAACAGGAT  350

seq1  CAGCTCCTCTGTGCCTGCAAAGAGAATGTGAATGGAGCTAAGAAAGCAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCCTCTGTGCCTGCAAAGAGAATGTGAATGGAGCTAAGAAAGCAAG  400

seq1  TCTTTTAAGAATAACACTAGGGGCTATTCTTAAAAGCACCCGACTGCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTAAGAATAACACTAGGGGCTATTCTTAAAAGCACCCGACTGCTCT  450

seq1  TCCGAAGGTCAGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGAAGGTCAGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACC  500

seq1  ATCCGTAACAAGATCTGACTCCCTCTTCTGGAGTGTCTGAGGACAGCTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCGTAACAAGATCTGACTCCCTCTTCTGGAGTGTCTGAGGACAGCTAC  550

seq1  AGTGTACTTACATATAATAAATAAATAAATCTTTAAAAAAAAAAAGAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTACTTACATATAATAAATAAATAAATCTTTAAAAAAAAAAAGAATA  600

seq1  ACACTAAAGAGAAGAGAAAACTAGGGATAAGCACGAGACGTGTTTACCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTAAAGAGAAGAGAAAACTAGGGATAAGCACGAGACGTGTTTACCTG  650

seq1  ACCTTTGGAATTATAAAATACTACTTAGAAAATGAAAGACCCTGGAAAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTGGAATTATAAAATACTACTTAGAAAATGAAAGACCCTGGAAAGC  700

seq1  TTGATC-TTGATCTTGTTTTGAGGGCACACTCCACATTGGTGTCCAGATC  749
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATCTTTGATCTTGTTTTGAGGGCACACTCCACATTGGTGTCCAGATC  750

seq1  CAG-TACACACTCGGCTGAGATCTCATACACCTGTGTTCACGAGCTGACG  798
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTACACACTCGGCTGAGATCTCATACACCTGTGTTCACGAGCTGACG  800

seq1  TGTTGATTGTAAAGTTAATG-TTGAAACGTGGGAGACTCAAAAGAGCCTT  847
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TGTTGATTGTAAAGTTAATGTTTGAAACGTGGGAGACTCAAAAGAGCCTT  850

seq1  GGTAAAGAATAGAGTTAGAACACTTTCTTAGCTTGCTACAAAGCTATAGT  897
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GGTAAAGAATAGAG-TAGAACACTTTCTTAGCTTGCTACAAAGCTATAGT  899

seq1  AATTGAAACCAGTTCCAATAGACTGAAGGGTAGATATATAAATCAGTGGG  947
      ||||||||||||||||||||||||||| ||||||||||||||||||| ||
seq2  AATTGAAACCAGTTCCAATAGACTGAA-GGTAGATATATAAATCAGT-GG  947

seq1  ACAGAAGGAGAGTCCAGAAATAAATGGAAATACTTGTGGCCCATTGATTT  997
      | |||| |||||| ||||||| ||| ||||||||||||||||||||||||
seq2  AAAGAATGAGAGT-CAGAAAT-AATTGAAATACTTGTGGCCCATTGATTT  995

seq1  TTCTTTTTAAACAAGGCAGTAAGAAGGACAGTTTAGTAGAGGCAAGGGAT  1047
      |||||||  ||||  |||||||||  ||||| ||||| || |||||||||
seq2  TTCTTTT--AACA--GCAGTAAGA--GACAGGTTAGT-GATGCAAGGGAT  1038

seq1  CGACTTCTCAATAAGTAATGGTGAGACAAGTAGGGGGTCCTTATGCAAAC  1097
      |||| |||||   ||| |||||| ||||||||  ||||||| |||| |||
seq2  CGAC-TCTCA--TAGT-ATGGTG-GACAAGTA--GGGTCCTAATGC-AAC  1080

seq1  AATGTATTT  1106
      |||||||||
seq2  AATGTATTT  1089