BAC Information

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BAC

Clone NameB6Ng01-150L07
Chromosome1 (Build37)
Map Location 52,954,637 - 53,072,563
singlet/doubletdoublet
Overlap geneHibch, 1700019D03Rik
Upstream geneMyo1b, EG667010, LOC667014, Stat4, LOC100042634, Stat1, Gls, LOC546735, Nab1, LOC546736, Gm553, LOC100042094, EG433305, 5330401P04Rik, 2210010L05Rik, Inpp1
Downstream geneGdf8, 1700019A02Rik, Pms1, LOC671024, Ormdl1, Osgepl1, Asnsd1, EG627858, EG627866, LOC100042162, Dnahc7, Stk17b, Hecw2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-150L07.bB6Ng01-150L07.g
ACCDH946717DH946718
length1,1821,105
definitionDH946717|Mus musculus domesticus DNA, BAC clone: B6Ng01-150L07, 5' end.DH946718|Mus musculus domesticus DNA, BAC clone: B6Ng01-150L07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(52,954,637 - 52,955,833)(53,071,448 - 53,072,563)
sequence
gaattctgtagaatgtacaaactgtcacaggaggctttaaaaatagattt
ttctgtattcatattttttcagtgtcttttctgacaaactcacacattac
taaaataaatcatattgttaaagctctttcgaggcgcaaaagcattcaca
tgcatcacgcagctaatttttcagtctttgttggttagctggtgattgga
tccatttctatggagaagtttgtggtactcttttttttcaattttatatt
tttaacaatttttattagatattttcttcatttacatttcaaatgctatc
cccccgccctgctcccctacccacccactccctcttcttggccctgggat
tcccctgtactggtgcatataaagtttgtaagaccaaggggcctctcttc
ccagtgatggccgactaggccatcttctgctacatatgcggctagagaca
agagctctgggggtactggtgagttcatattgttgttccacctatagggt
tgcagacccctttagctccttgggtactttctctagatcctccattgggg
gccgtgtgttccatccaatggatgactgtgagcatccacttctgtatttg
ccaggcactggtatagcctcacaatagacagctattatcagggacctgtc
agcaaaatctttctggcatatgcaagagtgtctgggtttggtggctgatt
atgggatgaatccccaggtatataaatgttgagatggtgttgtgagtgac
tcaggccagcctggtgccaattctgtagcctttgagccagtggtcactct
gtgccttcccagcagctagaactatagacctaggcaccaagccctactct
atgttcattttaaattaattttgtccagtttctatttctacattttaact
tttttctctctgaaaattctaacctgctcttagtatttctatgttattca
gtgtatgcattcatctcactttcatctatgggaaataggatttgagttgc
taaaaatataacttctctgtctgttttttgacatatgagtgaattcttgc
atttatttcagtttcagtgatttagtctccactgtggcattggatttttg
ccatgttagatgtctaagatttgtttgttggtcttgaaaggttgtatgga
ctaacaggctgaactcaggaacatcctatctc
gaattcctgagtaaaacacacattcacagcctttatacttaccacaagcc
ttaattggcacaagagctgggctgttagaatctactttcctaccaatagc
cctgaattattactgtgtttcatctgggctgctctttgatccgattgggc
agccctcaggaccacagtctcttgactcttacaaaccatagccagttctc
tctccactcctcctgctcgttcttctttcttagcccacaaaacctaaacc
ccacctatgtctcttctgcccagttattggctatcacatctctattcatc
aatcaaaattaacttgggctcttagaccacggcagcttttctccttttcc
ttctcctccctcttcctcttggccccaagctggggaaatgtttaaatctt
tcctttcacctattatctggattcccagccaattctgaatctggaaacct
ggtgcctttatctctttgatgaggattaattgttgtctgtgtaaacctca
ctcacaatccaactgaggtattggacaggaacagtaatcaggtaggacct
tccacagcgtcaaccaagtgctctaaacagttgtgttatttgtgtctgac
tcaaacatttaaaaggtacaaaagccccaagactcattttctccttatca
tttcgagagaatagctatcagcaaatgaagaggtgcagttgccgtggtaa
gtggcgtcatcgctgatgaacagcttaaattcacccaactgaggagattc
tattcctagatccttcagttatgccagcaagaaacataagctggagagag
gagttgaaactagagactgccaagcaatttttggcaaccatgtgggttcc
atctaggtataccaaaagaagagccgtatttatatgcaatagggttcctc
ttactcaacagtgtaggccactctgcttcagcccttctctagtaaatgtt
tattactctaaagtgtgagggtcagtgatgtagtgaagacacatttcgag
tgcagactgtattgactttgacttttacagtgtgtgactctggcactcac
caatttatctgcagctggcgtcttatctgtgacgtgagaagagtgcatgc
tttgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_52954637_52955833
seq2: B6Ng01-150L07.b_44_1225

seq1  GAATTCTGTAGAATGTACAAACTGTCACAGGAGGCTTTAAAAATAGATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTAGAATGTACAAACTGTCACAGGAGGCTTTAAAAATAGATTT  50

seq1  TTCTGTATTCATATTTTTTCAGTGTCTTTTCTGACAAACTCACACATTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTATTCATATTTTTTCAGTGTCTTTTCTGACAAACTCACACATTAC  100

seq1  TAAAATAAATCATATTGTTAAAGCTCTTTCGAGGCGCAAAAGCATTCACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAAATCATATTGTTAAAGCTCTTTCGAGGCGCAAAAGCATTCACA  150

seq1  TGCATCACGCAGCTAATTTTTCAGTCTTTGTTGGTTAGCTGGTGATTGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCACGCAGCTAATTTTTCAGTCTTTGTTGGTTAGCTGGTGATTGGA  200

seq1  TCCATTTCTATGGAGAAGTTTGTGGTACTCTTTTTTTTCAATTTTATATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTTCTATGGAGAAGTTTGTGGTACTCTTTTTTTTCAATTTTATATT  250

seq1  TTTAACAATTTTTATTAGATATTTTCTTCATTTACATTTCAAATGCTATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACAATTTTTATTAGATATTTTCTTCATTTACATTTCAAATGCTATC  300

seq1  CCCCCGCCCTGCTCCCCTACCCACCCACTCCCTCTTCTTGGCCCTGGGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCGCCCTGCTCCCCTACCCACCCACTCCCTCTTCTTGGCCCTGGGAT  350

seq1  TCCCCTGTACTGGTGCATATAAAGTTTGTAAGACCAAGGGGCCTCTCTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTGTACTGGTGCATATAAAGTTTGTAAGACCAAGGGGCCTCTCTTC  400

seq1  CCAGTGATGGCCGACTAGGCCATCTTCTGCTACATATGCGGCTAGAGACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGATGGCCGACTAGGCCATCTTCTGCTACATATGCGGCTAGAGACA  450

seq1  AGAGCTCTGGGGGTACTGGTGAGTTCATATTGTTGTTCCACCTATAGGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTCTGGGGGTACTGGTGAGTTCATATTGTTGTTCCACCTATAGGGT  500

seq1  TGCAGACCCCTTTAGCTCCTTGGGTACTTTCTCTAGATCCTCCATTGGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGACCCCTTTAGCTCCTTGGGTACTTTCTCTAGATCCTCCATTGGGG  550

seq1  GCCGTGTGTTCCATCCAATGGATGACTGTGAGCATCCACTTCTGTATTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGTGTGTTCCATCCAATGGATGACTGTGAGCATCCACTTCTGTATTTG  600

seq1  CCAGGCACTGGTATAGCCTCACAATAGACAGCTATTATCAGGGACCTGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCACTGGTATAGCCTCACAATAGACAGCTATTATCAGGGACCTGTC  650

seq1  AGCAAAATCTTTCTGGCATATGCAAGAGTGTCTGGGTTTGGTGGCTGATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAATCTTTCTGGCATATGCAAGAGTGTCTGGGTTTGGTGGCTGATT  700

seq1  ATGGGATGAATCCCCAGGTATATAAATGTTGAGATGGTGTTGTGAGTGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGATGAATCCCCAGGTATATAAATGTTGAGATGGTGTTGTGAGTGAC  750

seq1  TCAGGCCAGCCTGGTGCCAATTCTGTAGCCTTTGAGCCAGTGGTCACTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCCAGCCTGGTGCCAATTCTGTAGCCTTTGAGCCAGTGGTCACTCT  800

seq1  GTGCCTTCCCAGCAGCTAGAACTATAGACCTAGGCACCAAGCCCTACTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTTCCCAGCAGCTAGAACTATAGACCTAGGCACCAAGCCCTACTCT  850

seq1  ATGTTCATTTTAAATTAATTTTGTCCAGTTTCTATTTCTACATTTTAAAC  900
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ATGTTCATTTTAAATTAATTTTGTCCAGTTTCTATTTCTACATTTT-AAC  899

seq1  TTTTTTCTCTCTGAAAATTCTAACCTGCTCTTAGTATTTCTAATGTTATT  950
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TTTTTTCTCTCTGAAAATTCTAACCTGCTCTTAGTATTTCT-ATGTTATT  948

seq1  CAGTGTATGCATTCATCTCACTTTCATCTAT-GGAAATAGGATTTGAGTT  999
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CAGTGTATGCATTCATCTCACTTTCATCTATGGGAAATAGGATTTGAGTT  998

seq1  GCTAAAAATATAACTTCTCTGTCTGTTTTTTGAACATATGAGTGAATTCT  1049
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GCTAAAAATATAACTTCTCTGTCTGTTTTTTG-ACATATGAGTGAATTCT  1047

seq1  TGCATTTATGTCAGTTTCAGTTGATTTAGTCT-CACTGT-GCATTGTATT  1097
      ||||||||| |||||||||| ||||||||||| |||||| |||||| |||
seq2  TGCATTTATTTCAGTTTCAG-TGATTTAGTCTCCACTGTGGCATTGGATT  1096

seq1  TTTCTGCCATGTTAGATGTCTAGGTTTTGTTTGTTTTGTGTCTTTGAGAT  1147
      ||  |||||||||||||||||| | ||||||||||    |||||   || 
seq2  TT--TGCCATGTTAGATGTCTAAGATTTGTTTGTT---GGTCTT---GAA  1138

seq1  AGGGTCTAGATGGACTACACAGGTGCTGAACTCAGAGATCTACCTATCTC  1197
      ||| | |  |||||||| ||||  ||||||||||| || |  ||||||||
seq2  AGGTTGT--ATGGACTA-ACAG--GCTGAACTCAG-GAACATCCTATCTC  1182

seq1: chr1_53071448_53072563
seq2: B6Ng01-150L07.g_65_1169 (reverse)

seq1  GCAAAGCATGCACTCTTCTCACGTCACAGATAAGACG-CAGCTGCAGATT  49
      ||||||||||||||||||||||||||||||||||||| |||||||||| |
seq2  GCAAAGCATGCACTCTTCTCACGTCACAGATAAGACGCCAGCTGCAGA-T  49

seq1  AATTTGGTGAGTTGCCAGAGTTCACACACCTGGTAAAAAGTCAAAGTCAA  99
      || |||||||| |||||||| ||||||| |||   |||||||||||||||
seq2  AAATTGGTGAG-TGCCAGAG-TCACACA-CTG--TAAAAGTCAAAGTCAA  94

seq1  TTACAAGTCTGGCCACTCGGAATGTGTCTTTCACTACATCACCTGACCCT  149
       ||| ||||||  |||||| |||||||| |||||||||||| ||||||||
seq2  -TAC-AGTCTG--CACTCGAAATGTGTC-TTCACTACATCA-CTGACCCT  138

seq1  CACACTTTAGAGTAATAAACATTTACTAGAGAAGGGCTGAAGCAGAGTGG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTTTAGAGTAATAAACATTTACTAGAGAAGGGCTGAAGCAGAGTGG  188

seq1  CCTACACTGTTGAGTAAGAGGAACCCTATTGCATATAAATACGGCTCTTC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACACTGTTGAGTAAGAGGAACCCTATTGCATATAAATACGGCTCTTC  238

seq1  TTTTGGTATACCTAGATGGAACCCACATGGTTGCCAAAAATTGCTTGGCA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGTATACCTAGATGGAACCCACATGGTTGCCAAAAATTGCTTGGCA  288

seq1  GTCTCTAGTTTCAACTCCTCTCTCCAGCTTATGTTTCTTGCTGGCATAAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTAGTTTCAACTCCTCTCTCCAGCTTATGTTTCTTGCTGGCATAAC  338

seq1  TGAAGGATCTAGGAATAGAATCTCCTCAGTTGGGTGAATTTAAGCTGTTC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGATCTAGGAATAGAATCTCCTCAGTTGGGTGAATTTAAGCTGTTC  388

seq1  ATCAGCGATGACGCCACTTACCACGGCAACTGCACCTCTTCATTTGCTGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCGATGACGCCACTTACCACGGCAACTGCACCTCTTCATTTGCTGA  438

seq1  TAGCTATTCTCTCGAAATGATAAGGAGAAAATGAGTCTTGGGGCTTTTGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTATTCTCTCGAAATGATAAGGAGAAAATGAGTCTTGGGGCTTTTGT  488

seq1  ACCTTTTAAATGTTTGAGTCAGACACAAATAACACAACTGTTTAGAGCAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTTAAATGTTTGAGTCAGACACAAATAACACAACTGTTTAGAGCAC  538

seq1  TTGGTTGACGCTGTGGAAGGTCCTACCTGATTACTGTTCCTGTCCAATAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTGACGCTGTGGAAGGTCCTACCTGATTACTGTTCCTGTCCAATAC  588

seq1  CTCAGTTGGATTGTGAGTGAGGTTTACACAGACAACAATTAATCCTCATC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTTGGATTGTGAGTGAGGTTTACACAGACAACAATTAATCCTCATC  638

seq1  AAAGAGATAAAGGCACCAGGTTTCCAGATTCAGAATTGGCTGGGAATCCA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGATAAAGGCACCAGGTTTCCAGATTCAGAATTGGCTGGGAATCCA  688

seq1  GATAATAGGTGAAAGGAAAGATTTAAACATTTCCCCAGCTTGGGGCCAAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATAGGTGAAAGGAAAGATTTAAACATTTCCCCAGCTTGGGGCCAAG  738

seq1  AGGAAGAGGGAGGAGAAGGAAAAGGAGAAAAGCTGCCGTGGTCTAAGAGC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGAGGGAGGAGAAGGAAAAGGAGAAAAGCTGCCGTGGTCTAAGAGC  788

seq1  CCAAGTTAATTTTGATTGATGAATAGAGATGTGATAGCCAATAACTGGGC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTTAATTTTGATTGATGAATAGAGATGTGATAGCCAATAACTGGGC  838

seq1  AGAAGAGACATAGGTGGGGTTTAGGTTTTGTGGGCTAAGAAAGAAGAACG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGACATAGGTGGGGTTTAGGTTTTGTGGGCTAAGAAAGAAGAACG  888

seq1  AGCAGGAGGAGTGGAGAGAGAACTGGCTATGGTTTGTAAGAGTCAAGAGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGAGGAGTGGAGAGAGAACTGGCTATGGTTTGTAAGAGTCAAGAGA  938

seq1  CTGTGGTCCTGAGGGCTGCCCAATCGGATCAAAGAGCAGCCCAGATGAAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGTCCTGAGGGCTGCCCAATCGGATCAAAGAGCAGCCCAGATGAAA  988

seq1  CACAGTAATAATTCAGGGCTATTGGTAGGAAAGTAGATTCTAACAGCCCA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTAATAATTCAGGGCTATTGGTAGGAAAGTAGATTCTAACAGCCCA  1038

seq1  GCTCTTGTGCCAATTAAGGCTTGTGGTAAGTATAAAGGCTGTGAATGTGT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTGTGCCAATTAAGGCTTGTGGTAAGTATAAAGGCTGTGAATGTGT  1088

seq1  GTTTTACTCAGGAATTC  1116
      |||||||||||||||||
seq2  GTTTTACTCAGGAATTC  1105