BAC Information

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BAC

Clone NameB6Ng01-150M08
Chromosome1 (Build37)
Map Location 108,827,780 - 108,980,365
singlet/doubletdoublet
Overlap geneSerpinb12, Serpinb13, LOC666394, Serpinb3a, Serpinb3d
Upstream geneEG635504, Zcchc2, EG435634, Phlpp, LOC626075, Bcl2, LOC100042085, Fvt1, Vps4b, Serpinb5, LOC671141
Downstream geneLOC100041276, Serpinb3b, EG666401, Serpinb3c, LOC666414, Serpinb11, Serpinb7, Serpinb2, Serpinb10, Serpinb8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-150M08.bB6Ng01-150M08.g
ACCDH946764DH946765
length1,0931,085
definitionDH946764|Mus musculus domesticus DNA, BAC clone: B6Ng01-150M08, 5' end.DH946765|Mus musculus domesticus DNA, BAC clone: B6Ng01-150M08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(108,979,238 - 108,980,365)(108,827,780 - 108,828,857)
sequence
gaattcatttgaaacctttccacccaaactagcaagctggtgaggaatga
aagacaaaaggattctctattacctgcttgcaaagtcttaaagacactga
catcacaccttctacttaagatattaacattgcagaaggcttaaaaataa
taacaataataaatttatttgccagaatctgatgataaaggtatgtcatt
ttctataagaaatgttcattacagggtgatgttttttttagtgaagtcat
tctaacttttgtactgactttatactgttctaggacttcaaggtcacact
aagccatcatggatttgtttgctgtagccactactaaattcacacttgag
ctgtacaggcagctcagagaatcagacaacaacatcttctattcccccat
cagcatgatgagaacattagcaatgcttctgcttggagccaaagcaaaca
ctgaacaacaaattaagaaggtaggtctaagcttcgttttaatgaccagt
ttgaacttgactctcaagcactttgttagtgtacaggtaaatgacaatac
agcttgatgcctgaggtgaagaacatgatgctgagtaggcattgccatga
ctgtgaaatttgagagaaacatgtccttcccaaacacggtccaggtgctt
cctgatagcctttaagtgctggagtagaataatttccctcaagtgtccaa
caagaaattatcttaaatggtagagactattgattaaaaaaattgatttg
ctcagatctgatggatgtgaagtgaggtatttgctaagcactgactgact
ctagttatatgagtggtgatagatcagctttatggtgtttcttacaaacc
cttgtacaactattgaagtatatgtttttcaaatgttaaatctttggctt
atttttcagatttgtttgtttctgtttcttgattagacagaatgtaagta
aacttttctgtgcacttatgtctctccaggttctcatttcatgaaacaca
agaaacaacagaaaaatctgcagatctcatgtagtacaggtccacatgtc
tagcgagctcgatttgacgcatataacttaaatgacattacat
gaattcaatttcaaaggactaaattgttctcaccaatatttaagctggcc
acctgcctggttctctatgaggacagggaaccccaactccccagtctcta
ggaccatttcttctcctccccagattctagggcaatttcttctctccacg
aatggttccctccttaggatcctgtgatccccagcagcagccatagccac
attccttccaaaggctctcagtcagagcagatgagggttcataaaatgaa
aagcaagtatgctctctgtattccagtgcagttttcagaatgcttgagaa
tgatcttaaacataaagccactcataaagttgagcaacatgtctgcccaa
atgtgagctgaacaaggatgacaccaatgaatgtgtcaaagtggaagggg
aaatgctcacgagccctcaacccacacaaaatgctacaggcaaccaagga
acgttgagagtgggagagtcttccccagagaagagcaaagcaattacata
tccagaaccaaatggtaagccctgcaaacatacatatgtagatggagcag
gctatatttaggtctctctctctctctctctctctctctctctctctctc
tccacaattaatgaaaaaaacaggccatggattttgaaggagagcaagga
gaggcatgtgggacagtttggaggagggaagggaagagagaaatttgttg
ggctatgttttgtaattcttaattcttaatctttttccctccccataact
aataatctgccgtttaaaaatctctgtaaattactctctgtaaaaaagta
ttttttaacattacaaccaataaaataaaatttattttaaagatagaata
agcagtatgcacaaagtcagtctccaatagggttgtataagccctgggga
gggtgatgtgtcactatgcctcagcccagcctgtcttcccaaagagtgga
agatctacatgaggaactaccatctgtttctccagcatttcttctttcat
tgcccagccacttccttttctattttcaaattgaaagacaatcaaatcct
gtaaatatttctggggctcttacattgggcatatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_108979238_108980365
seq2: B6Ng01-150M08.b_44_1136 (reverse)

seq1  ATGTAAAATGGTCATTTTAAGTTATAATGCTGTCAAAAATCTGAAGCTCT  50
      ||||||    |||| |||||||||| |||| ||||||    |  ||||| 
seq2  ATGTAA---TGTCA-TTTAAGTTAT-ATGC-GTCAAA----TCGAGCTC-  39

seq1  GCTAGACATGTGGGACCCTGTACTTACATGAGATTCTGCAGATTTTTCTG  100
      |||||||||||||   ||||||| ||||||||| ||||||||||||||||
seq2  GCTAGACATGTGG--ACCTGTAC-TACATGAGA-TCTGCAGATTTTTCTG  85

seq1  TTGTTTTCTTTGTGGTTTCATTGAAATGAAGAACCTGGGAGAGACATTAA  150
      ||||||   |||| |||||| ||||||| ||||||| ||||||||| |||
seq2  TTGTTT--CTTGT-GTTTCA-TGAAATG-AGAACCT-GGAGAGACA-TAA  128

seq1  GTGCAACAAGAAAAGTTTACTTAACATTCTGTCTAAATCAAGAAAACAGA  200
      |||||   |||||||||||||| ||||||||||| ||||||| |||||||
seq2  GTGCA--CAGAAAAGTTTACTT-ACATTCTGTCT-AATCAAG-AAACAGA  173

seq1  AACAAAACAAAATCCTGAAAAATAAAGCCAAAAGATTTAAACATTTTGAA  250
      ||| |||||||   ||||||||| ||||| |||||||| |||| ||||||
seq2  AAC-AAACAAA--TCTGAAAAAT-AAGCC-AAAGATTT-AACA-TTTGAA  216

seq1  AAACATATACTTCAAATAGTTGTACAAGGGTTTGTAAGAAACACCATAAA  300
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AAACATATACTTC-AATAGTTGTACAAGGGTTTGTAAGAAACACCATAAA  265

seq1  GCTGATCTATCACCACTCATATAACTAGAGTCAGTCAGTGCTTAGCAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGATCTATCACCACTCATATAACTAGAGTCAGTCAGTGCTTAGCAAAT  315

seq1  ACCTCACTTCACATCCATCAGATCTGAGCAAATCAATTTTTTTAATCAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCACTTCACATCCATCAGATCTGAGCAAATCAATTTTTTTAATCAAT  365

seq1  AGTCTCTACCATTTAAGATAATTTCTTGTTGGACACTTGAGGGAAATTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCTACCATTTAAGATAATTTCTTGTTGGACACTTGAGGGAAATTAT  415

seq1  TCTACTCCAGCACTTAAAGGCTATCAGGAAGCACCTGGACCGTGTTTGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTCCAGCACTTAAAGGCTATCAGGAAGCACCTGGACCGTGTTTGGG  465

seq1  AAGGACATGTTTCTCTCAAATTTCACAGTCATGGCAATGCCTACTCAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACATGTTTCTCTCAAATTTCACAGTCATGGCAATGCCTACTCAGCA  515

seq1  TCATGTTCTTCACCTCAGGCATCAAGCTGTATTGTCATTTACCTGTACAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTTCTTCACCTCAGGCATCAAGCTGTATTGTCATTTACCTGTACAC  565

seq1  TAACAAAGTGCTTGAGAGTCAAGTTCAAACTGGTCATTAAAACGAAGCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAAAGTGCTTGAGAGTCAAGTTCAAACTGGTCATTAAAACGAAGCTT  615

seq1  AGACCTACCTTCTTAATTTGTTGTTCAGTGTTTGCTTTGGCTCCAAGCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTACCTTCTTAATTTGTTGTTCAGTGTTTGCTTTGGCTCCAAGCAG  665

seq1  AAGCATTGCTAATGTTCTCATCATGCTGATGGGGGAATAGAAGATGTTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATTGCTAATGTTCTCATCATGCTGATGGGGGAATAGAAGATGTTGT  715

seq1  TGTCTGATTCTCTGAGCTGCCTGTACAGCTCAAGTGTGAATTTAGTAGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGATTCTCTGAGCTGCCTGTACAGCTCAAGTGTGAATTTAGTAGTG  765

seq1  GCTACAGCAAACAAATCCATGATGGCTTAGTGTGACCTTGAAGTCCTAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACAGCAAACAAATCCATGATGGCTTAGTGTGACCTTGAAGTCCTAGA  815

seq1  ACAGTATAAAGTCAGTACAAAAGTTAGAATGACTTCACTAAAAAAAACAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTATAAAGTCAGTACAAAAGTTAGAATGACTTCACTAAAAAAAACAT  865

seq1  CACCCTGTAATGAACATTTCTTATAGAAAATGACATACCTTTATCATCAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTGTAATGAACATTTCTTATAGAAAATGACATACCTTTATCATCAG  915

seq1  ATTCTGGCAAATAAATTTATTATTGTTATTATTTTTAAGCCTTCTGCAAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGGCAAATAAATTTATTATTGTTATTATTTTTAAGCCTTCTGCAAT  965

seq1  GTTAATATCTTAAGTAGAAGGTGTGATGTCAGTGTCTTTAAGACTTTGCA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATATCTTAAGTAGAAGGTGTGATGTCAGTGTCTTTAAGACTTTGCA  1015

seq1  AGCAGGTAATAGAGAATCCTTTTGTCTTTCATTCCTCACCAGCTTGCTAG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGTAATAGAGAATCCTTTTGTCTTTCATTCCTCACCAGCTTGCTAG  1065

seq1  TTTGGGTGGAAAGGTTTCAAATGAATTC  1128
      ||||||||||||||||||||||||||||
seq2  TTTGGGTGGAAAGGTTTCAAATGAATTC  1093

seq1: chr1_108827780_108828857
seq2: B6Ng01-150M08.g_68_1152

seq1  GAATTCAATTTCAAAGGACTAAATTGTTCTCACCAATATTTAAGCTGGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATTTCAAAGGACTAAATTGTTCTCACCAATATTTAAGCTGGCC  50

seq1  ACCTGCCTGGTTCTCTATGAGGACAGGGAACCCCAACTCCCCAGTCTCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGCCTGGTTCTCTATGAGGACAGGGAACCCCAACTCCCCAGTCTCTA  100

seq1  GGACCATTTCTTCTCCTCCCCAGATTCTAGGGCAATTTCTTCTCTCCACG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCATTTCTTCTCCTCCCCAGATTCTAGGGCAATTTCTTCTCTCCACG  150

seq1  AATGGTTCCCTCCTTAGGATCCTGTGATCCCCAGCAGCAGCCATAGCCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTTCCCTCCTTAGGATCCTGTGATCCCCAGCAGCAGCCATAGCCAC  200

seq1  ATTCCTTCCAAAGGCTCTCAGTCAGAGCAGATGAGGGTTCATAAAATGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTTCCAAAGGCTCTCAGTCAGAGCAGATGAGGGTTCATAAAATGAA  250

seq1  AAGCAAGTATGCTCTCTGTATTCCAGTGCAGTTTTCAGAATGCTTGAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAGTATGCTCTCTGTATTCCAGTGCAGTTTTCAGAATGCTTGAGAA  300

seq1  TGATCTTAAACATAAAGCCACTCATAAAGTTGAGCAACATGTCTGCCCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTTAAACATAAAGCCACTCATAAAGTTGAGCAACATGTCTGCCCAA  350

seq1  ATGTGAGCTGAACAAGGATGACACCAATGAATGTGTCAAAGTGGAAGGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAGCTGAACAAGGATGACACCAATGAATGTGTCAAAGTGGAAGGGG  400

seq1  AAATGCTCACGAGCCCTCAACCCACACAAAATGCTACAGGCAACCAAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCTCACGAGCCCTCAACCCACACAAAATGCTACAGGCAACCAAGGA  450

seq1  ACGTTGAGAGTGGGAGAGTCTTCCCCAGAGAAGAGCAAAGCAATTACATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTTGAGAGTGGGAGAGTCTTCCCCAGAGAAGAGCAAAGCAATTACATA  500

seq1  TCCAGAACCAAATGGTAAGCCCTGCAAACATACATATGTAGATGGAGCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAACCAAATGGTAAGCCCTGCAAACATACATATGTAGATGGAGCAG  550

seq1  GCTATATTTAGGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATATTTAGGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  600

seq1  TCCACAATTAATGAAAAAAACAGGCCATGGA-TTTGAAGGAGAGCAAGGA  649
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TCCACAATTAATGAAAAAAACAGGCCATGGATTTTGAAGGAGAGCAAGGA  650

seq1  GAGGCATGTGGGACAGTTTGGAGGAGGGAAGGGAAGAGAGAAATTTG-TG  698
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GAGGCATGTGGGACAGTTTGGAGGAGGGAAGGGAAGAGAGAAATTTGTTG  700

seq1  GGCTATG-TTTGTAATTCTTAATTCTTAATCTTTTTCCCTCCCCATAACT  747
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTATGTTTTGTAATTCTTAATTCTTAATCTTTTTCCCTCCCCATAACT  750

seq1  AATAATCT-CCGTTTAAAAATCTCTGTAAATTACTCTCTGTTAAAAAAGT  796
      |||||||| ||||||||||||||||||||||||||||||| |||||||||
seq2  AATAATCTGCCGTTTAAAAATCTCTGTAAATTACTCTCTG-TAAAAAAGT  799

seq1  A-TTTTTAACATTACAACCAATAAAATAAAATTTATTTAAAAGATAGAAT  845
      | |||||||||||||||||||||||||||||||||||| |||||||||||
seq2  ATTTTTTAACATTACAACCAATAAAATAAAATTTATTTTAAAGATAGAAT  849

seq1  -AGCAGTATGCACAAAGTCAGTCTCCAATAGGGCTGTATAAGCCCTGGGA  894
       |||||||||||||||||||||||||||||||| ||||||||||||||| 
seq2  AAGCAGTATGCACAAAGTCAGTCTCCAATAGGGTTGTATAAGCCCTGGGG  899

seq1  AGGGTGATGTGTCACTATGCCTCAGCCAAGCCTGTCTCCCCAAAGAGTGG  944
      ||||||||||||||||||||||||||| ||||||||| ||||||||||||
seq2  AGGGTGATGTGTCACTATGCCTCAGCCCAGCCTGTCTTCCCAAAGAGTGG  949

seq1  AAGATCTACATGAGGAACTACCATCTGTTCTCCCAGCATTTCCTC-TTCA  993
      |||||||||||||||||||||||||||||   |||||||||| || ||||
seq2  AAGATCTACATGAGGAACTACCATCTGTTTCTCCAGCATTTCTTCTTTCA  999

seq1  CTGCCCAGCCACTTCCCCTTTCTATTTTCAAA-TGAAAGACCATCAAAAT  1042
       ||||||||||||| || |||||||||||||| |||||||| ||| ||||
seq2  TTGCCCAGCCACTT-CCTTTTCTATTTTCAAATTGAAAGACAATC-AAAT  1047

seq1  CCTGTAATTATTTCTGGGTC-CTTACATT-GACATATG  1078
      ||||||| |||||||||| | |||||||| | ||||||
seq2  CCTGTAAATATTTCTGGGGCTCTTACATTGGGCATATG  1085