BAC Information

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BAC

Clone NameB6Ng01-151A06
Chromosome1 (Build37)
Map Location 149,383,793 - 149,384,887
singlet/doubletsinglet
Overlap genenone
Upstream geneB830045N13Rik, LOC100043240
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151A06.bB6Ng01-151A06.g
ACCDH946946DH946947
length1,1471,085
definitionDH946946|Mus musculus domesticus DNA, BAC clone: B6Ng01-151A06, 5' end.DH946947|Mus musculus domesticus DNA, BAC clone: B6Ng01-151A06, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgattggcagagaagcacctgaaaaaatg
ttcaacatccttaatcaccagggaaatgcaaatcaaaacaaccatgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcagacttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactacccaggatccagcaatacctctcctgggca
tatatccagaagatgccccaactggtaagaaggacacatgctccactatg
ttcatagcagccttatttataatagccagaagctggaaagaacccagatg
cccctcaacagaggaatggatacagaaaatgtggtacatctacacaacgg
agtactactcagctattaaaaagaatgaatttatgaaattcctagccaaa
tggatggacctggagggcatcatcctgagtgaggtaacacattcacaaag
gaactcaatcaatatgtactcactgataggtggatattagccccaaacct
aggatacccaagatataagatagaatttgctaaacaaatgaaactcaaga
agaatgaagactgaagtgtggacactatgcccctccttagaattgggaac
aaaacacccatggaaggagttacagagacaaagtttggagctgagatgaa
aggatggaccatgaagagactgccatatccagggatccaccccataatca
gcatccaaacgctgacaccattgcatacactagcaagattttattgaaag
gacccagatgtagctgtctcttgtgagactatgccggggcctagcaacac
agaagtggatgctcacagtcagctaatggatggatcacagggctcccaat
ggaggagctagagaaagtagccagagctaaagggatctgcaccctatagg
tggacacatatgactacagtacccgagctcttgactcttcgctgcatatg
tatcaagatgctagtcgcatcactgaaagagtccatgactgcaacttata
tgccagtacaggacgccaggcaaaagggggatggttgggtaggaatg
gaattcacttacttatattatgcatgccaccttaagagagtaactaaata
gtattgctttagatagatttgtttcagacgttacagcaatgacatgtagt
gtaattaaaatatcaggcagaatttgaaaatactttgtgtaatccaagcg
ataatatttatcaaggtgttttaactttcttgtaacatgtgaataattaa
taatgtaattacaggcaagttctttcttatatataatcaaaatgactggg
aaataaacagtggaaataataaataaataaacaataataataataaataa
acagtggaaaaataagaaatcatgttgccatatagctatagtttatgttt
aagattccttatcaaagttctgtccattgtctgaatgaataaacttttca
aaatttagtgagagtgttatgacatctctaacagttcctaagcaagatgt
gatgaactatgaatgagctaaaacattttgcagaaatatatccaggcaca
aaggtgactaaggtatatctgaaaagaaagtttagaaagaaagtgcacat
taaaacatattatcgtagagtatgaatgaattaatcaaaggcatttttat
tcaaatgaccactaaagtgactgttaagtgatctacacacttttaaaatt
attcttagtaatttctataattcatttagtactgatttgatttttgtgct
cttctctctctctctgcatgtatatatgtttgttattttaccatgatttc
tttctttatttaagactaatgagtttattctttttggtaaatctccctaa
atttcataaaatcaaaatatatttaattaaatatatttagttgcattaag
tactaaacgtttgcattatctttatattataagtttttgatatctttaaa
agtatataaataatttacatgtttttctgttttcctatttgacagtttca
tattctctgatttacctttcctcttctttttatttagtcctgtagtgatt
acatgtagtagataaatgggcactctcctttacacattcttttatgcccc
catgaggggtgggagacatggtaatctcttatctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_149383793_149384887
seq2: B6Ng01-151A06.g_67_1151

seq1  GAATTCACTTACTTATATTATGCATGCCACCTTAAGAGAGTAACTAAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTACTTATATTATGCATGCCACCTTAAGAGAGTAACTAAATA  50

seq1  GTATTGCTTTAGATAGATTTGTTTCAGACGTTACAGCAATGACATGTAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTGCTTTAGATAGATTTGTTTCAGACGTTACAGCAATGACATGTAGT  100

seq1  GTAATTAAAATATCAGGCAGAATTTGAAAATACTTTGTGTAATCCAAGCG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTAAAATATCAGGCAGAATTTGAAAATACTTTGTGTAATCCAAGCG  150

seq1  ATAATATTTATCAAGGTGTTTTAACTTTCTTGTAACATGTGAATAATTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATATTTATCAAGGTGTTTTAACTTTCTTGTAACATGTGAATAATTAA  200

seq1  TAATGTAATTACAGGCAAGTTCTTTCTTATATATAATCAAAATGACTGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTAATTACAGGCAAGTTCTTTCTTATATATAATCAAAATGACTGGG  250

seq1  AAATAAACAGTGGAAATAATAAATAAATAAACAATAATAATAATAAATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAACAGTGGAAATAATAAATAAATAAACAATAATAATAATAAATAA  300

seq1  ACAGTGGAAAAATAAGAAATCATGTTGCCATATAGCTATAGTTTATGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGGAAAAATAAGAAATCATGTTGCCATATAGCTATAGTTTATGTTT  350

seq1  AAGATTCCTTATCAAAGTTCTGTCCATTGTCTGAATGAATAAACTTTTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTCCTTATCAAAGTTCTGTCCATTGTCTGAATGAATAAACTTTTCA  400

seq1  AAATTTAGTGAGAGTGTTATGACATCTCTAACAGTTCCTAAGCAAGATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTAGTGAGAGTGTTATGACATCTCTAACAGTTCCTAAGCAAGATGT  450

seq1  GATGAACTATGAATGAGCTAAAACATTTTGCAGAAATATATCCAGGCACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAACTATGAATGAGCTAAAACATTTTGCAGAAATATATCCAGGCACA  500

seq1  AAGGTGACTAAGGTATATCTGAAAAGAAAGTTTAGAAAGAAAGTGCACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGACTAAGGTATATCTGAAAAGAAAGTTTAGAAAGAAAGTGCACAT  550

seq1  TAAAACATATTATCGTAGAGTATGAATGAATTAATCAAAGGCATTTTTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACATATTATCGTAGAGTATGAATGAATTAATCAAAGGCATTTTTAT  600

seq1  TCAAATGACCACTAAAGTGACTGTTAAGTGATCTACACACTTTTAAAATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATGACCACTAAAGTGACTGTTAAGTGATCTACACACTTTTAAAATT  650

seq1  ATTCTTAGTAATTTCTATAATTCATTTAGTACTGATTTGATTTTTGTGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTAGTAATTTCTATAATTCATTTAGTACTGATTTGATTTTTGTGCT  700

seq1  CTTCTCTCTCTCTCTGCATGTATATATGTTTGTTATTTTACCATGATTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCTCTCTCTCTGCATGTATATATGTTTGTTATTTTACCATGATTTC  750

seq1  TTTCTTTATTTAAGACTAATGAGTTTATTCTTTTTGGTAAATCTCCCTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTATTTAAGACTAATGAGTTTATTCTTTTTGGTAAATCTCCCTAA  800

seq1  ATTTCATAAAATCAAAATATATTTAATTAAATATATTTAGTTGCATTAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATAAAATCAAAATATATTTAATTAAATATATTTAGTTGCATTAAG  850

seq1  TACTAAACGTTTGCATTATCTTTATATTATAAGTTTTTGATATCTTTAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAAACGTTTGCATTATCTTTATATTATAAGTTTTTGATATCTTTAAA  900

seq1  AGTATATAAATAATTTACATGTTTTTCTGTTTTCCTATTTTGACAGTTTC  950
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AGTATATAAATAATTTACATGTTTTTCTGTTTTCCTA-TTTGACAGTTTC  949

seq1  AATATTCTCTGATTTACCTTTCCTCTTCTTTTTTATTTAGTCCTGTAGTG  1000
       ||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  -ATATTCTCTGATTTACCTTTCCTCTTC-TTTTTATTTAGTCCTGTAGTG  997

seq1  ATTACATGTAGTAGATAAAATGGCACTCTCCTTTTACACCATCTTTTAAT  1050
      |||||||||||||||||||  |||||||||| |||||||  |||||| ||
seq2  ATTACATGTAGTAGATAAATGGGCACTCTCC-TTTACACATTCTTTT-AT  1045

seq1  GCCCCCCATGAAGGGGTGGGAGACCATGGTTATCTCTTTTATCTG  1095
      | |||||||| |||||||||||| |||||| |||||  |||||||
seq2  G-CCCCCATG-AGGGGTGGGAGA-CATGGTAATCTC--TTATCTG  1085