BAC Information

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BAC

Clone NameB6Ng01-151A16
Chromosome1 (Build37)
Map Location 44,115,128 - 44,230,803
singlet/doubletdoublet
Overlap geneEG666713, 1700029F09Rik, Kdelc1, Bivm, Ercc5
Upstream geneTgfbrap1, AI597479, Fhl2, EG666642, EG666644, LOC100041644, Nck2, 1500015O10Rik, Uxs1, LOC666676, LOC100042303, EG666690, Tpp2, A530098C11Rik
Downstream gene4832428D23Rik, LOC435619, Txn-ps1, Gulp1, LOC100041738, LOC100041752, LOC383640
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151A16.bB6Ng01-151A16.g
ACCDH946966DH946967
length1,1471,071
definitionDH946966|Mus musculus domesticus DNA, BAC clone: B6Ng01-151A16, 5' end.DH946967|Mus musculus domesticus DNA, BAC clone: B6Ng01-151A16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(44,229,627 - 44,230,803)(44,115,128 - 44,116,221)
sequence
gaattctgttctgctaagaggttactttccagggcatccagttcctccta
aaacatgttcccagccgcagaaaattacagtcatgatccaattatgctca
tttgttacaataaagcacgcatttcctctggctgaaatgaccaataagcc
ttacagtgttttccacttgggatttccaggcaagactgcccctttcagtg
gtctcattacatcatatgggaacctaactaaaaaccccaggtataactta
catattaaaagggagctataagaaacaagatgaattaaaaacagctagtg
aatatttatctagcgacttttaaaatctcaaaagccatagacttggcttc
cttggcactaagttagaatgtgatattaccaaattaatatcttgccattc
gttgggcatgtcctcagcatctatgtcagcttctctgtgtccttccattg
cctcaatgtcagagctgtcctgtaggaggcactctgtgtccctggaggtt
ccttcctccagagtttctcttggttcctctgcatctttttcagagagatg
tgtagaagcctcggatgactctgtttgaagttcactattgctgaccacac
tctgcacctcaatgaaacttcctgtccaaaaaaaatcatgatgtcacttc
atctgacatgagaacattagagccactgtgaagtcatcaaagctttctga
gcagtcctgaaaaatgtcaaacctcaaaggaaatgacttaaggatagcta
taaacattcaactcactagtttgctacagtgcaccacagatgcctatctg
ccacttccaaccaagcgttttcaatgagataaaatgatctattaagctct
tggtcactaaaagtaggaaacaaattctcacagatttgcatattaacttt
gaaaagctacgttacattgactaattctgttattaaaactcagagagacg
ccaggatgcagataggctgacgcagtcttcactctcattttctctcagtc
catcctcagtctcatcactactctgtagcagacactcctgctgctgtctc
actttctctcaccccatccaatgtatcacaaagatctcaacacttgcctc
ctcatctagtatccaggcctactagcatctctgggagacaccagctg
gaattcccttctggaatttggttttgattcaactattttttcattgggat
ttatcatggaaacagaaagactgctgataatgatttctgaagggatatca
ttactccttggaaccacggtttttggtttgttgaaggcatattccaattt
cctcttcctgctcggactaccaagtatctttgaaattgggtactttggga
ttctcatagttgaatatttgggtctcagttctcttttcagatttgttact
gtgaatctgtttttctggcttttaggacaaataggagcataggcatacaa
tgaattgagattgtttgtttgaaacaatttttgtccttgaaggtttttct
ttgcagtaacagtcaatggtggacctaatttccttcttttgtcacaaacc
gccttattactcatgcgtacccttgactgtgtctgtggactgatattcac
tacaggttttctacccacatttatttgatttctgttgggaactggaacat
tcagaaaagggaaggcttttggctttccctgctctatcatcatcacactt
tggtctcccttaccttgaaatttactagaatggacactgcttaatttttt
aagtggtatcttttctaaagaaaagattggagaaactgaaaacttggctt
tataacttaaattatctttgatttcattttccgtcttccaatttaaattt
ttagttaacagttcttttttatattttcctagctgacccttttgccattt
gaaggacatgtccagcaccttttcccctattatgatacctaaccttgtga
aatcgattttatgatgtggaaaggttggcttacgttgtgatttaatatgt
ggatgatgacttagtctcaggcactggtcacacactttgacgtctgtgac
ctgtttgttgcagtagcacattgtgttcggttgcttaacatacacttatg
atcactcagttactcgctggttgctgtgtctggcatctgatgatctggaa
atttcttgtggatgagggattcctaatccggctgagtctttctggttgac
tgtgaatctagaccggtgatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_44229627_44230803
seq2: B6Ng01-151A16.b_44_1190 (reverse)

seq1  CAGCTGGTGTGCTCACAGAGAATGCTAGTTAGAGCCTGGGATACTAGGAT  50
      |||||||||| ||| ||||| ||||||| ||| |||| |||||||| |||
seq2  CAGCTGGTGT-CTCCCAGAG-ATGCTAG-TAG-GCCT-GGATACTA-GAT  44

seq1  GAGTGGAGGCAAGGAAGGTTGGAGATCTTTGTGATACATTTGGGATGGGG  100
      ||  |||||||||    ||| |||||||||||||||||||  ||||||||
seq2  GA--GGAGGCAAG---TGTT-GAGATCTTTGTGATACATT--GGATGGGG  86

seq1  TGAGAGGAAAGTGAGACAGCAGCAGGGAGGTGTCCTGCTACAGAGTAGTG  150
      ||||| ||||||||||||||||||||   |||| ||||||||||||||| 
seq2  TGAGA-GAAAGTGAGACAGCAGCAGG--AGTGT-CTGCTACAGAGTAGT-  131

seq1  GATGAGACTGAGGGAATGGGACTGGAGGAGAAAATGGAGAGGTGAAGACC  200
      |||||||||||||  || ||||||   |||||||| |||| ||||||| |
seq2  GATGAGACTGAGG--AT-GGACTG--AGAGAAAAT-GAGA-GTGAAGA-C  173

seq1  TGCCGTCAGCCTATCTGCATCCCTGGCCGTCTCTCTGAGTTTTAATAACA  250
      || ||||||||||||||||| ||||| |||||||||||||||||||||||
seq2  TG-CGTCAGCCTATCTGCAT-CCTGG-CGTCTCTCTGAGTTTTAATAACA  220

seq1  GAATTAGTCAATGTAACGTAGCTTTTCAAAGTTAATATGCAAATCTGTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTAGTCAATGTAACGTAGCTTTTCAAAGTTAATATGCAAATCTGTGA  270

seq1  GAATTTGTTTCCTACTTTTAGTGACCAAGAGCTTAATAGATCATTTTATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTGTTTCCTACTTTTAGTGACCAAGAGCTTAATAGATCATTTTATC  320

seq1  TCATTGAAAACGCTTGGTTGGAAGTGGCAGATAGGCATCTGTGGTGCACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGAAAACGCTTGGTTGGAAGTGGCAGATAGGCATCTGTGGTGCACT  370

seq1  GTAGCAAACTAGTGAGTTGAATGTTTATAGCTATCCTTAAGTCATTTCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCAAACTAGTGAGTTGAATGTTTATAGCTATCCTTAAGTCATTTCCT  420

seq1  TTGGGGTTTGACATTTTTCAGGACTGCTCAGAAAGCTTTGATGACTTCAC  500
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGTTTGACATTTTTCAGGACTGCTCAGAAAGCTTTGATGACTTCAC  470

seq1  AGTGGCTCTAATGTTCTCATGTCAGATGAAGTGACATCATGATTTTTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCTCTAATGTTCTCATGTCAGATGAAGTGACATCATGATTTTTTTT  520

seq1  GGACAGGAAGTTTCATTGAGGTGCAGAGTGTGGTCAGCAATAGTGAACTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGGAAGTTTCATTGAGGTGCAGAGTGTGGTCAGCAATAGTGAACTT  570

seq1  CAAACAGAGTCATCCGAGGCTTCTACACATCTCTCTGAAAAAGATGCAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAGAGTCATCCGAGGCTTCTACACATCTCTCTGAAAAAGATGCAGA  620

seq1  GGAACCAAGAGAAACTCTGGAGGAAGGAACCTCCAGGGACACAGAGTGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACCAAGAGAAACTCTGGAGGAAGGAACCTCCAGGGACACAGAGTGCC  670

seq1  TCCTACAGGACAGCTCTGACATTGAGGCAATGGAAGGACACAGAGAAGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTACAGGACAGCTCTGACATTGAGGCAATGGAAGGACACAGAGAAGCT  720

seq1  GACATAGATGCTGAGGACATGCCCAACGAATGGCAAGATATTAATTTGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATAGATGCTGAGGACATGCCCAACGAATGGCAAGATATTAATTTGGT  770

seq1  AATATCACATTCTAACTTAGTGCCAAGGAAGCCAAGTCTATGGCTTTTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCACATTCTAACTTAGTGCCAAGGAAGCCAAGTCTATGGCTTTTGA  820

seq1  GATTTTAAAAGTCGCTAGATAAATATTCACTAGCTGTTTTTAATTCATCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTAAAAGTCGCTAGATAAATATTCACTAGCTGTTTTTAATTCATCT  870

seq1  TGTTTCTTATAGCTCCCTTTTAATATGTAAGTTATACCTGGGGTTTTTAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTTATAGCTCCCTTTTAATATGTAAGTTATACCTGGGGTTTTTAG  920

seq1  TTAGGTTCCCATATGATGTAATGAGACCACTGAAAGGGGCAGTCTTGCCT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTTCCCATATGATGTAATGAGACCACTGAAAGGGGCAGTCTTGCCT  970

seq1  GGAAATCCCAAGTGGAAAACACTGTAAGGCTTATTGGTCATTTCAGCCAG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATCCCAAGTGGAAAACACTGTAAGGCTTATTGGTCATTTCAGCCAG  1020

seq1  AGGAAATGCGTGCTTTATTGTAACAAATGAGCATAATTGGATCATGACTG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAATGCGTGCTTTATTGTAACAAATGAGCATAATTGGATCATGACTG  1070

seq1  TAATTTTCTGCGGCTGGGAACATGTTTTAGGAGGAACTGGATGCCCTGGA  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTCTGCGGCTGGGAACATGTTTTAGGAGGAACTGGATGCCCTGGA  1120

seq1  AAGTAACCTCTTAGCAGAACAGAATTC  1177
      |||||||||||||||||||||||||||
seq2  AAGTAACCTCTTAGCAGAACAGAATTC  1147

seq1: chr1_44115128_44116221
seq2: B6Ng01-151A16.g_65_1135

seq1  GAATTCCCTTCTGGAATTTGGTTTTGATTCAACTATTTTTTCATTGGGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTTCTGGAATTTGGTTTTGATTCAACTATTTTTTCATTGGGAT  50

seq1  TTATCATGGAAACAGAAAGACTGCTGATAATGATTTCTGAAGGGATATCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCATGGAAACAGAAAGACTGCTGATAATGATTTCTGAAGGGATATCA  100

seq1  TTACTCCTTGGAACCACGGTTTTTGGTTTGTTGAAGGCATATTCCAATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTCCTTGGAACCACGGTTTTTGGTTTGTTGAAGGCATATTCCAATTT  150

seq1  CCTCTTCCTGCTCGGACTACCAAGTATCTTTGAAATTGGGTACTTTGGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTCCTGCTCGGACTACCAAGTATCTTTGAAATTGGGTACTTTGGGA  200

seq1  TTCTCATAGTTGAATATTTGGGTCTCAGTTCTCTTTTCAGATTTGTTACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCATAGTTGAATATTTGGGTCTCAGTTCTCTTTTCAGATTTGTTACT  250

seq1  GTGAATCTGTTTTTCTGGCTTTTAGGACAAATAGGAGCATAGGCATACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATCTGTTTTTCTGGCTTTTAGGACAAATAGGAGCATAGGCATACAA  300

seq1  TGAATTGAGATTGTTTGTTTGAAACAATTTTTGTCCTTGAAGGTTTTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTGAGATTGTTTGTTTGAAACAATTTTTGTCCTTGAAGGTTTTTCT  350

seq1  TTGCAGTAACAGTCAATGGTGGACCTAATTTCCTTCTTTTGTCACAAACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGTAACAGTCAATGGTGGACCTAATTTCCTTCTTTTGTCACAAACC  400

seq1  GCCTTATTACTCATGCGTACCCTTGACTGTGTCTGTGGACTGATATTCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTATTACTCATGCGTACCCTTGACTGTGTCTGTGGACTGATATTCAC  450

seq1  TACAGGTTTTCTACCCACATTTATTTGATTTCTGTTGGGAACTGGAACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGTTTTCTACCCACATTTATTTGATTTCTGTTGGGAACTGGAACAT  500

seq1  TCAGAAAAGGGAAGGCTTTTGGCTTTCCCTGCTCTATCATCATCACACTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAAAGGGAAGGCTTTTGGCTTTCCCTGCTCTATCATCATCACACTT  550

seq1  TGGTCTCCCTTACCTTGAAATTTACTAGAATGGACACTGCTTAATTTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTCCCTTACCTTGAAATTTACTAGAATGGACACTGCTTAATTTTTT  600

seq1  AAGTGGTATCTTTTCTAAAGAAAAGATTGGAGAAACTGAAAACTTGGCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGTATCTTTTCTAAAGAAAAGATTGGAGAAACTGAAAACTTGGCTT  650

seq1  TATAACTTAAATTATCTTTGATTTCATTTTCCGTCTTCCAATTTAAATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACTTAAATTATCTTTGATTTCATTTTCCGTCTTCCAATTTAAATTT  700

seq1  TTAGTTAACAGTTCTTTTTTATATTTTCCTAGCTGACCCTTTTGCCATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTAACAGTTCTTTTTTATATTTTCCTAGCTGACCCTTTTGCCATTT  750

seq1  GAAGGACATGTCCAGCACCTTTTCCCCTATTATGATACCTAACCTTGTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGACATGTCCAGCACCTTTTCCCCTATTATGATACCTAACCTTGTGA  800

seq1  AATCGATTTTATGATGTGGAAAGGTTGGCTTACGTTGTGATTTAATATGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCGATTTTATGATGTGGAAAGGTTGGCTTACGTTGTGATTTAATATGT  850

seq1  GGATGATGACTTAGTCTCAGGGCACTGGTCACACACTTTGACGTCTGTGA  900
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GGATGATGACTTAGTCTCA-GGCACTGGTCACACACTTTGACGTCTGTGA  899

seq1  CCTGTTTTGTTGCAGTAGCACATTGTGTTCGGTTGCCTTAACAATACACT  950
      |||| |||||||||||||||||||||||||||||| |||||| |||||||
seq2  CCTG-TTTGTTGCAGTAGCACATTGTGTTCGGTTG-CTTAAC-ATACACT  946

seq1  TATAATCAACCTCAGTTAACTCGCTGGTTGCTGTGTCCTGGGCATCTGAT  1000
      ||| ||||  ||||||| |||||||||||||||||||   ||||||||||
seq2  TATGATCA--CTCAGTT-ACTCGCTGGTTGCTGTGTC--TGGCATCTGAT  991

seq1  GGTTCTTGGAAATTTTCTTGTGGATGAGGGGATTTTGTAAATCCTGCTGT  1050
      | |   |||||| |||||||||||||||||    ||   ||||| |||| 
seq2  GAT--CTGGAAA-TTTCTTGTGGATGAGGG---ATTCCTAATCCGGCTGA  1035

seq1  GTCTTTCTGTGTTTTGTCCTGTGAATATCTAGAATCTGGTGATG  1094
      ||||||||| |||     ||||||  |||||||  | |||||||
seq2  GTCTTTCTG-GTT---GACTGTGA--ATCTAGA--CCGGTGATG  1071