BAC Information

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BAC

Clone NameB6Ng01-151B23
Chromosome1 (Build37)
Map Location 68,344,060 - 68,442,221
singlet/doubletdoublet
Overlap geneErbb4
Upstream geneKif22-ps
Downstream geneLOC667842, EG241084
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151B23.bB6Ng01-151B23.g
ACCDH947026DH947027
length1,2031,071
definitionDH947026|Mus musculus domesticus DNA, BAC clone: B6Ng01-151B23, 5' end.DH947027|Mus musculus domesticus DNA, BAC clone: B6Ng01-151B23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,344,060 - 68,345,279)(68,441,141 - 68,442,221)
sequence
gaattcttactgagataagacggcttttttcttttttctttttttttaaa
gaaatagactgggatttgcttgaggtgacattatttccactggtgtacag
tcaaagttctttctccaatgtctctataagtgaccataacactgaacaaa
gacaatttcatcaatttgtgtttacccagttattcttaataccataggtt
atgctgcacaacacttcctcttgaatggaaaatatgtatgtatcttcctg
cattgtttcatgacagtgaaagaactctatgttctaggacaatgtacaat
aaaatgactcacatgactaacaacagtattagttaagttgtcaacacaca
tatgagcagactatcatttcttccttctctttcatggttgcctgctacca
ggtttcattgaaggagtaatccaaagtggtaattgttaaagagatattct
tattttaggttttaatggtgaagaaatagaaaccaacttatacatttagt
aaaaaaaattctctatgacataagtactatattgtatcttctaatatcca
aagcacactagcttcatgaagatattaatagtatggtaaatgttggtaaa
ctataagcagagatattttagaggtccacctagaaagaatttctgttaaa
ttcgacatgtaaaatgtaatgctacatatcatttccagagatgatttcag
ggtacatagatggcatcgtggaaaatgaataataaaacatattaatcctt
tcaactggaaacatgtacatgccttagtcctgaaccagtgaggatgctta
cccctgggtgcagtttggatggcaagggtggcactcccgatcctgatctg
catacttaaaaatgaaactgtttgctccctgtaggccatctggacatttc
tccacacagtttggaccatccttaaaatgagagcactttgtgcagttgtc
agtccctgagatatgaaaaaggaaagcaaatatggagaagaaactgggtt
caattccctctgtaaggtgtttatgttgtttagttttcttaggcatttgt
gaggacaagtttattcttctcctaggagagcactccattaacacacaata
gttatgctattgagtataaccagcactagagaactacagctctctcttgt
aagctggtattagtgaatctatctagcatcatgttgtcaatatactctga
aac
gaattctttctatcttaaggtttttatgctatttttatgtgagaagattt
atcagattaatagtgtttaatatgatgaaatgttaaacaaattgttaaac
aaatagtttctgaactatcactgaagcctctgccaatgattctgcctggg
atctctcatttttataaagcagcctttgttgtcacacatttattagtact
gacatttgtatgagaactgaatctttatcaagtattaacctgggttttaa
atttctcatctgttattatatatttcccacctgaaatcataactgtctcc
acatagttccataattatttgcaatagtgctgattgtgttatgacgcttt
tatgggaaatcaaactccaagggacaattattaaatttcatgatggccat
aataacataatggggaaatatgaatgtatttgatcaaaactgacagctga
gtttttaataaaaggctagagcctttttttgtgaaagtaggataacataa
ttttcttgtcatctttaaaaagaaatttgtatgaaattctttctttgtag
ttttcaagttacctaccaggtaaactttcatgtgcagttttttttttttt
tcattttaaatctgcttgtgctaacaatggaaaagatgtggtttagaaat
tactattgttttcaggtggcctgtaatatgagcatgttacatagggcaga
ggttgtattggttgaatgagggaaaggcttgctgactctcagattctcaa
aatgacttgcctttaaggcatagacaagatcatgtaagaataacgcctga
atcggaagccagaaaggaaatcatcccactgcctttacagggtttgaagc
agaaaaggtctgtggggttagaacacattcacagatggtatcgctttgtg
ctgttcttttggagggctaatttgggatgattgtgcctataattaggcaa
cagtgactggacttttggtttgcatgtacaatttcagatgccaaataaaa
tgcaagagggttcataatcaatgtctttacagattaccaacaatgttgtc
aaatgtaatactacatagctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_68344060_68345279
seq2: B6Ng01-151B23.b_44_1246

seq1  GAATTCTTACTGAGATAAGACGGCTTTTTTCTTTTTTCTTTTTTTTTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTACTGAGATAAGACGGCTTTTTTCTTTTTTCTTTTTTTTTAAA  50

seq1  GAAATAGACTGGGATTTGCTTGAGGTGACATTATTTCCACTGGTGTACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAGACTGGGATTTGCTTGAGGTGACATTATTTCCACTGGTGTACAG  100

seq1  TCAAAGTTCTTTCTCCAATGTCTCTATAAGTGACCATAACACTGAACAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGTTCTTTCTCCAATGTCTCTATAAGTGACCATAACACTGAACAAA  150

seq1  GACAATTTCATCAATTTGTGTTTACCCAGTTATTCTTAATACCATAGGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATTTCATCAATTTGTGTTTACCCAGTTATTCTTAATACCATAGGTT  200

seq1  ATGCTGCACAACACTTCCTCTTGAATGGAAAATATGTATGTATCTTCCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGCACAACACTTCCTCTTGAATGGAAAATATGTATGTATCTTCCTG  250

seq1  CATTGTTTCATGACAGTGAAAGAACTCTATGTTCTAGGACAATGTACAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTTTCATGACAGTGAAAGAACTCTATGTTCTAGGACAATGTACAAT  300

seq1  AAAATGACTCACATGACTAACAACAGTATTAGTTAAGTTGTCAACACACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGACTCACATGACTAACAACAGTATTAGTTAAGTTGTCAACACACA  350

seq1  TATGAGCAGACTATCATTTCTTCCTTCTCTTTCATGGTTGCCTGCTACCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGCAGACTATCATTTCTTCCTTCTCTTTCATGGTTGCCTGCTACCA  400

seq1  GGTTTCATTGAAGGAGTAATCCAAAGTGGTAATTGTTAAAGAGATATTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCATTGAAGGAGTAATCCAAAGTGGTAATTGTTAAAGAGATATTCT  450

seq1  TATTTTAGGTTTTAATGGTGAAGAAATAGAAACCAACTTATACATTTAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTAGGTTTTAATGGTGAAGAAATAGAAACCAACTTATACATTTAGT  500

seq1  AAAAAAAATTCTCTATGACATAAGTACTATATTGTATCTTCTAATATCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAATTCTCTATGACATAAGTACTATATTGTATCTTCTAATATCCA  550

seq1  AAGCACACTAGCTTCATGAAGATATTAATAGTATGGTAAATGTTGGTAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACACTAGCTTCATGAAGATATTAATAGTATGGTAAATGTTGGTAAA  600

seq1  CTATAAGCAGAGATATTTTAGAGGTCCACCTAGAAAGAATTTCTGTTAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAAGCAGAGATATTTTAGAGGTCCACCTAGAAAGAATTTCTGTTAAA  650

seq1  TTCGACATGTAAAATGTAATGCTACATATCATTTCCAGAGATGATTTCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGACATGTAAAATGTAATGCTACATATCATTTCCAGAGATGATTTCAG  700

seq1  GGTACATAGATGGCATCGTGGAAAATGAATAATAAAACATATTAATCCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACATAGATGGCATCGTGGAAAATGAATAATAAAACATATTAATCCTT  750

seq1  TCAACTGGAAACATGTACATGCCTTAGTCCTGAACCAGTGAGGATGCTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTGGAAACATGTACATGCCTTAGTCCTGAACCAGTGAGGATGCTTA  800

seq1  CCCCTGGGTGCAGTTTGGATGGCAAGGGTGGCACTCCCGATCCTGATCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGGGTGCAGTTTGGATGGCAAGGGTGGCACTCCCGATCCTGATCTG  850

seq1  CATACTTAAAAATGAAACTGTTTGCTCCCTGTAGGCCATCTGGACATTTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTTAAAAATGAAACTGTTTGCTCCCTGTAGGCCATCTGGACATTTC  900

seq1  TCCACACAGTTTGGACCATCCTTAAAATGAGAGCACTTTGTGCAGTTGTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACACAGTTTGGACCATCCTTAAAATGAGAGCACTTTGTGCAGTTGTC  950

seq1  AGGTCCCTGAGATATGAAAAAGGAAAAGCAAATATGGAGAAAGAAAACTG  1000
      | ||||||||||||||||||||| |||||||||||||||||   ||||||
seq2  A-GTCCCTGAGATATGAAAAAGG-AAAGCAAATATGGAGAA--GAAACTG  996

seq1  GGTTCAATTCCCTCTGTAAGGTGTTTATGTTGTTTAGTTTTCTTAGGCAT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCAATTCCCTCTGTAAGGTGTTTATGTTGTTTAGTTTTCTTAGGCAT  1046

seq1  TTGTGAAGGACAAGTTTATTCTCCTCTAAGGGAGAGCACTCCATTAACAC  1100
      ||||| |||||||||||||||| |||  | ||||||||||||||||||||
seq2  TTGTG-AGGACAAGTTTATTCTTCTCCTA-GGAGAGCACTCCATTAACAC  1094

seq1  CAACATAAGTTATGGCTATTGAAGTATAACCAGCACTAAGAGAACCTACA  1150
        |||  |||||| ||||||| ||||||||||||||| |||||| |||||
seq2  --ACAATAGTTAT-GCTATTG-AGTATAACCAGCACT-AGAGAA-CTACA  1138

seq1  GGCTCTTCTTTGTAAAGCTGTATTTAGTGAAATCATACTAGCATCATGTT  1200
       |||||   |||| ||||||   |||||| ||||   |||||||||||||
seq2  -GCTCTCTCTTGT-AAGCTGGTATTAGTG-AATCTATCTAGCATCATGTT  1185

seq1  GTCAAATATACTCTAGAAAC  1220
      ||| |||||||||| |||||
seq2  GTC-AATATACTCT-GAAAC  1203

seq1: chr1_68441141_68442221
seq2: B6Ng01-151B23.g_67_1137 (reverse)

seq1  AAGCTATGTAAGTAATAACATTTTGACAACAATTGGTGGGTAATCTGTAA  50
      ||||||||| ||| || ||| ||||||||||  | || ||||||||||||
seq2  AAGCTATGT-AGT-ATTACA-TTTGACAACA--TTGTTGGTAATCTGTAA  45

seq1  AGGACCATTGATTATGAACCCTTTCTGCATTTTTAATTTTGGCATCTGAA  100
      ||   ||||||||||||||||| | ||||||||    |||||||||||||
seq2  AG--ACATTGATTATGAACCCTCT-TGCATTTT---ATTTGGCATCTGAA  89

seq1  ATTGTACATGCAAACCAAAAAGTCCAGTCACTGTTGCCTAATTATAGGCA  150
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  ATTGTACATGCAAACC-AAAAGTCCAGTCACTGTTGCCTAATTATAGGCA  138

seq1  CAATCAT-CCAAATTAGCCCTCCAAAAGAACAGCACAAAGCGATACCATC  199
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCATCCCAAATTAGCCCTCCAAAAGAACAGCACAAAGCGATACCATC  188

seq1  TGTGAATGTGTTCTAACCCCACAGACCTTTTCTGCTTCAAACCCTGTAAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAATGTGTTCTAACCCCACAGACCTTTTCTGCTTCAAACCCTGTAAA  238

seq1  GGCAGTGGGATGATTTCC-TTCTGGCTTCCGATTCAGGCGTTATTCTTAC  298
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GGCAGTGGGATGATTTCCTTTCTGGCTTCCGATTCAGGCGTTATTCTTAC  288

seq1  ATGATCTTGTCTATGCCTTAAAGGCAAGTCATTTTGAGAATCTGAGAGTC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATCTTGTCTATGCCTTAAAGGCAAGTCATTTTGAGAATCTGAGAGTC  338

seq1  AGCAAGCCTTTCCCTCATTCAACCAATACAACCTCTGCCCTATGTAACAT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGCCTTTCCCTCATTCAACCAATACAACCTCTGCCCTATGTAACAT  388

seq1  GCTCATATTACAGGCCACCTGAAAACAATAGTAATTTCTAAACCACATCT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATATTACAGGCCACCTGAAAACAATAGTAATTTCTAAACCACATCT  438

seq1  TTTCCATTGTTAGCACAAGCAGATTTAAAATGAAAAAAAAAAAAAACTGC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCATTGTTAGCACAAGCAGATTTAAAATGAAAAAAAAAAAAAACTGC  488

seq1  ACATGAAAGTTTACCTGGTAGGTAACTTGAAAACTACAAAGAAAGAATTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAAAGTTTACCTGGTAGGTAACTTGAAAACTACAAAGAAAGAATTT  538

seq1  CATACAAATTTCTTTTTAAAGATGACAAGAAAATTATGTTATCCTACTTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACAAATTTCTTTTTAAAGATGACAAGAAAATTATGTTATCCTACTTT  588

seq1  CACAAAAAAAGGCTCTAGCCTTTTATTAAAAACTCAGCTGTCAGTTTTGA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAAAAAGGCTCTAGCCTTTTATTAAAAACTCAGCTGTCAGTTTTGA  638

seq1  TCAAATACATTCATATTTCCCCATTATGTTATTATGGCCATCATGAAATT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATACATTCATATTTCCCCATTATGTTATTATGGCCATCATGAAATT  688

seq1  TAATAATTGTCCCTTGGAGTTTGATTTCCCATAAAAGCGTCATAACACAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATTGTCCCTTGGAGTTTGATTTCCCATAAAAGCGTCATAACACAA  738

seq1  TCAGCACTATTGCAAATAATTATGGAACTATGTGGAGACAGTTATGATTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCACTATTGCAAATAATTATGGAACTATGTGGAGACAGTTATGATTT  788

seq1  CAGGTGGGAAATATATAATAACAGATGAGAAATTTAAAACCCAGGTTAAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGGGAAATATATAATAACAGATGAGAAATTTAAAACCCAGGTTAAT  838

seq1  ACTTGATAAAGATTCAGTTCTCATACAAATGTCAGTACTAATAAATGTGT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGATAAAGATTCAGTTCTCATACAAATGTCAGTACTAATAAATGTGT  888

seq1  GACAACAAAGGCTGCTTTATAAAAATGAGAGATCCCAGGCAGAATCATTG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAACAAAGGCTGCTTTATAAAAATGAGAGATCCCAGGCAGAATCATTG  938

seq1  GCAGAGGCTTCAGTGATAGTTCAGAAACTATTTGTTTAACAATTTGTTTA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGGCTTCAGTGATAGTTCAGAAACTATTTGTTTAACAATTTGTTTA  988

seq1  ACATTTCATCATATTAAACACTATTAATCTGATAAATCTTCTCACATAAA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTCATCATATTAAACACTATTAATCTGATAAATCTTCTCACATAAA  1038

seq1  AATAGCATAAAAACCTTAAGATAGAAAGAATTC  1081
      |||||||||||||||||||||||||||||||||
seq2  AATAGCATAAAAACCTTAAGATAGAAAGAATTC  1071