BAC Information

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BAC

Clone NameB6Ng01-151C18
Chromosome1 (Build37)
Map Location 133,963,103 - 134,058,110
singlet/doubletdoublet
Overlap geneMfsd4, Pctk3, LOC100042221
Upstream geneMapkapk2, Dyrk3, Lgtn, Rassf5, Ikbke, Srgap2, LOC100042826, LOC100042821, 2700049P18Rik, Avpr1b, LOC667238, Ctse, 5430435G22Rik, Slc26a9, 4732466D17Rik, Slc41a1, Rab7l1, Nucks1, Slc45a3, Elk4
Downstream geneLemd1, EG638532, Klhdc8a, Nuak2, Tmcc2, Ripk5, Rbbp5, Tmem81, Cntn2, Nfasc, Lrrn2, Mdm4, LOC638636, Pik3c2b, Ppp1r15b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151C18.bB6Ng01-151C18.g
ACCDH947064DH947065
length1,1961,074
definitionDH947064|Mus musculus domesticus DNA, BAC clone: B6Ng01-151C18, 5' end.DH947065|Mus musculus domesticus DNA, BAC clone: B6Ng01-151C18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(134,056,900 - 134,058,110)(133,963,103 - 133,964,183)
sequence
gaattcctaaggtagccttttttggtacttaactggcaggctgccctcct
ccgagaagggccatgcggattgtcccttttctgtcccaggtccagaagct
cggtggtgggccagtcaatcctctaggctggctccactctccttcctgga
acacctgcttcagaggatacacctaccctgcccttccctgccagatggcc
tggcattgcccttgccagctccctgtgacttgcagaggacccctgcccac
tcctggagagccagggtgcaatgacttcagccaacacttatactgatcgt
ttaaagtcattcaacaagtatttcgggccagcctgctctgagcgaagttc
catgccactccctggggcatgaagaagattgaagacatcaaactatatcc
taatgctctagagccttgagacaggaagacaagactcacagcatgcaatg
tagcaaaagcaagtgcaggtcccattaaacagagctagttacccacaggc
aggctctactgggcaataccgcagctcagagaggttaggaggtttgtcca
cggtcacatagttagtaaagggtggaagtggtattaaaatgcaggctgtc
cagcttctgggccaaggtttataaaatgtttgatctgtactaggtgaaca
caggggagaggcacagaggcagaggttgcagctgcttgggggcaactggg
caacgctggatcttgggttttgcttttcagataccttgagcagcttgatc
ctggctctggactcttagagccgggagcggcctggcagcctcaccacgct
accttaagttaaatcttgcaggtcaggattgagccttgtcacaggatgac
tacagagacagtcttaggcaatgatatcaccactgagtggcaaacagcct
gctgtcctactccattaggatgtgcacagtgcagcttccttccctgacac
ttgtccctcatgacatttacatggcggggggggggtgtcagtgcagaggg
gagtattatccagattctctttcttgcaactgctgccatacccagctccc
caaatatgacgcaattaaataatgcgtgagctaggatgaatctcttgaga
atgtttgccatgccagcaggggttgtgggctccattgcagtaggactgat
tatgtgccatgacataaacttactgtccgtcatggcacaaagtgtg
gaattcttgcatttgcaaaaggatgtaggggaaatgaaaatagtcactct
ccaattgctgaggtgcagcaggctctggattgcttagactggggtccatt
ttatactgacacctgtgttgcatcgtcccacagctgcacaccctttggcc
tagaatggcctctgcacaagatcttttattctatctatctatctatctat
ctatctatctatctatctatctatctagttttgtaacagacctcccaatt
gtggttttgcagtccagataattgctcctttaggaagtagaacaaggaag
accacacagcagcctctggtgtgcaaaccattcattcctcagctctaggt
ctcagttctaggtctattcctggctgtacagagactgaaggctgctgact
ttctagaaatatcttcagaggggttcctacaccagaaaaatggggctctg
cacggcacccaaaagggtaatattctgagtgccagggatagaccagagct
ctgtcctgacagaagccagggagaagtaacaaggtggagggatacattag
gggtattctgggtactagagatagaggatggatgagaggctctacacttc
tctacctggcccaagggctcagcctccgcaggcaaatgctgcagccgagt
cctgtctcccttaggagatcccaggagcctcaccatcttggtaaagggat
cagctgtatcaattgatgtggacctattatgagtggaatcaccagtgggt
tcctagtcaaaccacaggccagccctgtcactgagaactgtcccctgagc
tggcaccgccaactgtcttcccctcagtgccaattccacctccggcgccg
aggctacaaatctcagaggaacagagcaataagggtcttacgcatctctg
tacattccatcactctttggctggtgggctcggtgagcgagggcgaaagg
gtctgagctctctcgggacgagtggagacaaatacatagccagatgttca
cttcagtcccgagaagagttttcgggaagagcttgtatggggagggagca
gccctggctagatccagaccagct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_134056900_134058110
seq2: B6Ng01-151C18.b_43_1238 (reverse)

seq1  CACACTTTTGTGCCATGAACAGCCCAGTAATGTTTATGTTACCATGGCCA  50
      ||||| ||||||||||||   |  |||||| ||||||||   ||||||  
seq2  CACAC-TTTGTGCCATGA--CGGACAGTAA-GTTTATGT---CATGGC--  41

seq1  CCATAATCAGTCCCTTCTGACAATGGAGCCCACAACCCCCTGCTTGCTAG  100
       |||||||||| ||| ||| ||||||||||||||| |||||||| ||  |
seq2  ACATAATCAGT-CCTACTG-CAATGGAGCCCACAA-CCCCTGCTGGCATG  88

seq1  GCAAACA-TCTCCAGAGATTCATTCCTAGCCTCACGCACTAATTTTATTG  149
      ||||||| |||| ||||||||| |||||| |||||||| | |||| ||||
seq2  GCAAACATTCTCAAGAGATTCA-TCCTAG-CTCACGCA-TTATTTAATTG  135

seq1  CGTCATTATTTGGGGAGCTGGGTATGGCAGCAGGTGCAAGAAAGAGAATA  199
      ||||| ||||||||||||||||||||||||||| ||||||||||||||| 
seq2  CGTCA-TATTTGGGGAGCTGGGTATGGCAGCAGTTGCAAGAAAGAGAAT-  183

seq1  TTGGATAATACT-CCCTCTGCACTGACACCCCCCCCCCCGCCATGTAAAT  248
       ||||||||||| ||||||||||||||| |||||||||||||||||||||
seq2  CTGGATAATACTCCCCTCTGCACTGACA-CCCCCCCCCCGCCATGTAAAT  232

seq1  GTCATGAGGGACAAGTGTCAGGGAAGGAAGCTGCACTGTGCACATCCTAA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGAGGGACAAGTGTCAGGGAAGGAAGCTGCACTGTGCACATCCTAA  282

seq1  TGGAGTAGGACAGCAGGCTGTTTGCCACTCAGTGGTGATATCATTGCCTA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTAGGACAGCAGGCTGTTTGCCACTCAGTGGTGATATCATTGCCTA  332

seq1  AGACTGTCTCTGTAGTCATCCTGTGACAAGGCTCAATCCTGACCTGCAAG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGTCTCTGTAGTCATCCTGTGACAAGGCTCAATCCTGACCTGCAAG  382

seq1  ATTTAACTTAAGGTAGCGTGGTGAGGCTGCCAGGCCGCT-CCGGCTCTAA  447
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  ATTTAACTTAAGGTAGCGTGGTGAGGCTGCCAGGCCGCTCCCGGCTCTAA  432

seq1  GAGTCCAGAGCCAGGATCAAGCTGCTCAAGGTATCTGAAAAGCAAAACCC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCCAGAGCCAGGATCAAGCTGCTCAAGGTATCTGAAAAGCAAAACCC  482

seq1  AAGATCCAGCGTTGCCCAGTTGCCCCCAAGCAGCTGCAACCTCTGCCTCT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCCAGCGTTGCCCAGTTGCCCCCAAGCAGCTGCAACCTCTGCCTCT  532

seq1  GTGCCTCTCCCCTGTGTTCACCTAGTACAGATCAAACATTTTATAAACCT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTCTCCCCTGTGTTCACCTAGTACAGATCAAACATTTTATAAACCT  582

seq1  TGGCCCAGAAGCTGGACAGCCTGCATTTTAATACCACTTCCACCCTTTAC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCCAGAAGCTGGACAGCCTGCATTTTAATACCACTTCCACCCTTTAC  632

seq1  TAACTATGTGACCGTGGACAAACCTCCTAACCTCTCTGAGCTGCGGTATT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTATGTGACCGTGGACAAACCTCCTAACCTCTCTGAGCTGCGGTATT  682

seq1  GCCCAGTAGAGCCTGCCTGTGGGTAACTAGCTCTGTTTAATGGGACCTGC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGTAGAGCCTGCCTGTGGGTAACTAGCTCTGTTTAATGGGACCTGC  732

seq1  ACTTGCTTTTGCTACATTGCATGCTGTGAGTCTTGTCTTCCTGTCTCAAG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGCTTTTGCTACATTGCATGCTGTGAGTCTTGTCTTCCTGTCTCAAG  782

seq1  GCTCTAGAGCATTAGGATATAGTTTGATGTCTTCAATCTTCTTCATGCCC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTAGAGCATTAGGATATAGTTTGATGTCTTCAATCTTCTTCATGCCC  832

seq1  CAGGGAGTGGCATGGAACTTCGCTCAGAGCAGGCTGGCCCGAAATACTTG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGAGTGGCATGGAACTTCGCTCAGAGCAGGCTGGCCCGAAATACTTG  882

seq1  TTGAATGACTTTAAACGATCAGTATAAGTGTTGGCTGAAGTCATTGCACC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATGACTTTAAACGATCAGTATAAGTGTTGGCTGAAGTCATTGCACC  932

seq1  CTGGCTCTCCAGGAGTGGGCAGGGGTCCTCTGCAAGTCACAGGGAGCTGG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTCTCCAGGAGTGGGCAGGGGTCCTCTGCAAGTCACAGGGAGCTGG  982

seq1  CAAGGGCAATGCCAGGCCATCTGGCAGGGAAGGGCAGGGTAGGTGTATCC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGCAATGCCAGGCCATCTGGCAGGGAAGGGCAGGGTAGGTGTATCC  1032

seq1  TCTGAAGCAGGTGTTCCAGGAAGGAGAGTGGAGCCAGCCTAGAGGATTGA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAGCAGGTGTTCCAGGAAGGAGAGTGGAGCCAGCCTAGAGGATTGA  1082

seq1  CTGGCCCACCACCGAGCTTCTGGACCTGGGACAGAAAAGGGACAATCCGC  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCCACCACCGAGCTTCTGGACCTGGGACAGAAAAGGGACAATCCGC  1132

seq1  ATGGCCCTTCTCGGAGGAGGGCAGCCTGCCAGTTAAGTACCAAAAAAGGC  1197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCCTTCTCGGAGGAGGGCAGCCTGCCAGTTAAGTACCAAAAAAGGC  1182

seq1  TACCTTAGGAATTC  1211
      ||||||||||||||
seq2  TACCTTAGGAATTC  1196

seq1: chr1_133963103_133964183
seq2: B6Ng01-151C18.g_67_1140

seq1  GAATTCTTGCATTTGCAAAAGGATGTAGGGGAAATGAAAATAGTCACTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGCATTTGCAAAAGGATGTAGGGGAAATGAAAATAGTCACTCT  50

seq1  CCAATTGCTGAGGTGCAGCAGGCTCTGGATTGCTTAGACTGGGGTCCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTGCTGAGGTGCAGCAGGCTCTGGATTGCTTAGACTGGGGTCCATT  100

seq1  TTATACTGACACCTGTGTTGCATCGTCCCACAGCTGCACACCCTTTGGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACTGACACCTGTGTTGCATCGTCCCACAGCTGCACACCCTTTGGCC  150

seq1  TAGAATGGCCTCTGCACAAGATCTTTTATTCTATCTATCTATCTATCTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATGGCCTCTGCACAAGATCTTTTATTCTATCTATCTATCTATCTAT  200

seq1  CTATCTATCTATCTATCTATCTATCTAGTTTTGTAACAGACCTCCCAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTATCTATCTATCTATCTATCTAGTTTTGTAACAGACCTCCCAATT  250

seq1  GTGGTTTTGCAGTCCAGATAATTGCTCCTTTAGGAAGTAGAACAAGGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTTTGCAGTCCAGATAATTGCTCCTTTAGGAAGTAGAACAAGGAAG  300

seq1  ACCACACAGCAGCCTCTGGTGTGCAAACCATTCATTCCTCAGCTCTAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACACAGCAGCCTCTGGTGTGCAAACCATTCATTCCTCAGCTCTAGGT  350

seq1  CTCAGTTCTAGGTCTATTCCTGGCTGTACAGAGACTGAAGGCTGCTGACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTTCTAGGTCTATTCCTGGCTGTACAGAGACTGAAGGCTGCTGACT  400

seq1  TTCTAGAAATATCTTCAGAGGGGTTCCTACACCAGAAAAATGGGGCTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGAAATATCTTCAGAGGGGTTCCTACACCAGAAAAATGGGGCTCTG  450

seq1  CACGGCACCCAAAAGGGTAATATTCTGAGTGCCAGGGATAGACCAGAGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGGCACCCAAAAGGGTAATATTCTGAGTGCCAGGGATAGACCAGAGCT  500

seq1  CTGTCCTGACAGAAGCCAGGGAGAAGTAACAAGGTGGAGGGATACATTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCTGACAGAAGCCAGGGAGAAGTAACAAGGTGGAGGGATACATTAG  550

seq1  GGGTATTCTGGGTACTAGAGATAGAGGATGGATGAGAGGCTCTACACTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTATTCTGGGTACTAGAGATAGAGGATGGATGAGAGGCTCTACACTTC  600

seq1  TCTACCTGGCCCAAGGGCTCAGCCTCCGCAGGCAAATGCTGCAGCCGAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCTGGCCCAAGGGCTCAGCCTCCGCAGGCAAATGCTGCAGCCGAGT  650

seq1  CCTGTCTCCCTTAGGAGATCCCAGGAGCCTCACCATCTTGGTAAAGGGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCTCCCTTAGGAGATCCCAGGAGCCTCACCATCTTGGTAAAGGGAT  700

seq1  CAGCTGTATCAATTGATGTGGACCTATTATGAGTGGAATCACCAGTGGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGTATCAATTGATGTGGACCTATTATGAGTGGAATCACCAGTGGGT  750

seq1  TCCTAGTCAAACCACAGGCCAGCCCTGTCACTGAGAACTGTCCCCTGAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGTCAAACCACAGGCCAGCCCTGTCACTGAGAACTGTCCCCTGAGC  800

seq1  TGGCACCGCCAACTGTCTTCCCCTCAGTGCCAATTCCACCTCCGGCGCCG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACCGCCAACTGTCTTCCCCTCAGTGCCAATTCCACCTCCGGCGCCG  850

seq1  AGGCTACAAAATCTCAGAGGAACAGAGCAATAAGGGTCTTACGCATCTCT  900
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTAC-AAATCTCAGAGGAACAGAGCAATAAGGGTCTTACGCATCTCT  899

seq1  GTACATTCCATCACTCTTTGGCTGGTGGGCTCGGTGAGCGAGGGCGAAAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATTCCATCACTCTTTGGCTGGTGGGCTCGGTGAGCGAGGGCGAAAG  949

seq1  GGTTCTGAGCTCTCTCGGGACGAGT-GAGACAAATACATAGCCCAGATGT  999
      || |||||||||||||||||||||| ||||||||||||||| ||||||||
seq2  GG-TCTGAGCTCTCTCGGGACGAGTGGAGACAAATACATAG-CCAGATGT  997

seq1  CACCTTCAGTCCCGAG-AGAGTTTTCCGGGAGAGCTTGTAGTGGGGGAGG  1048
         ||||||||||||| ||||||||| || ||||||||||   |||||||
seq2  TCACTTCAGTCCCGAGAAGAGTTTTCGGGAAGAGCTTGTA--TGGGGAGG  1045

seq1  GAGGCAGCCCCTGGGCTAAGATCCAGCCCAGCT  1081
      || |||||||   |||| |||||||| ||||||
seq2  GA-GCAGCCC--TGGCT-AGATCCAGACCAGCT  1074