BAC Information

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BAC

Clone NameB6Ng01-151F02
Chromosome1 (Build37)
Map Location 18,581,123 - 18,582,244
singlet/doubletsinglet
Overlap genenone
Upstream genePi15, Crispld1, LOC665564, LOC100040126, Crisp4, EG574082, EG654460, Defb17
Downstream geneLOC383499, EG435611, LOC100040189, Tcfap2d, LOC100040413, Tcfap2b, LOC100040198, LOC226901
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151F02.bB6Ng01-151F02.g
ACCDH947165DH947166
length1,2041,121
definitionDH947165|Mus musculus domesticus DNA, BAC clone: B6Ng01-151F02, 5' end.DH947166|Mus musculus domesticus DNA, BAC clone: B6Ng01-151F02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccagactgctggacacctaccctgacagaggagagcttgcctgca
gagagtgctctgaccactggaacttaggagagagttggactcccaggagt
gctgacagaggctaaaagaatcacaggaggacaatctccaaccagagaca
gcttgaaaattaacaccagagatttccagatggtgaaaggcaaacataag
aatcttactaacagtaacaaagaccgcacaccatcatcagaacccagcac
tcccacctcaacgattccaggataccccaacacaccagaaaagcaagatt
caaatttaaaatcctatctcaagatgctggtagaagattttaagaaggaa
attaataactcacttaaagaaatacagaagaacatggctaaacaggtaga
aggccttaatctttccaagaacacagcctttcaaaggataataaagggaa
aacaccaacacaaagatggaaattacattctagaaaaaagaagaaattaa
tccttcaacaaacctaaaagaagatagccatacaaacataataacacctc
taacaacaaaggtaacaggaagaaacaattactcttcttaaatatctctt
aatattaatggactcaattccccaataaaaagccatagactaataaactg
gctatacaaaaagaacctaacattttgctacttacaggaaacccacctca
aggacaaagacagacactacctcagagtaaaaggctggaaaacaattttc
caagtaaatgatccgaagaaacaaactggagtagccattgtaatatcaaa
taaaattgactttcaaaccaaagttatcaaaaaagacaaggaggggcact
tcatactcatcaaaagtgaaatctaccaagatgaactctcagttctaaat
atctatgctccaatgcaagggcagccaattcattaaagaaactttagtaa
agctcaaagcacacattgcatctcacaacaataatagttggagacttcaa
cacccactctcacaatggaaaggtcttcgaaacagaaagtaaacagaaga
ccacatggacactaacagaagttatgaaacaaatgtatttataatatcta
tcttaacatttatctaacaaagattacgtcctctcagcacctcaagaatc
tcctcgatgacaataattgtcaaaacaagccttcacacggattcaaaaaa
tatg
gaattcattaggagggaccaaattagcttggtgggaaattatccttggtg
acaatgctgagctgtctctgtcatcaggaaaaaaaaatccacatctattg
caatgaagtctaatagtgacagagaacttctgagacattaaaagaagaaa
taacaaaaatgttaaaatcaaagcagaacatgagcaaagaagtggtaggg
tatcacgtagacttcaaaaaccaaaacaacaaccaaatatgttatcttct
aggcaagcatgagctatcagtgtatgtgggaaaggtaagaaccaacaggc
accatttcaatttagaataggataagtttgtgttttaagggatctaggtt
ttctttaggggatcagatagcttttttgcctcttaaaatctaagagcttt
gcttcatacatacatacacacacacacacacacacacacacatatatata
tatatatatatatatatatatatatatatatatataggcatacagttgag
ctacctaggttattcatcttacatttgaatttatcatctctttgccttta
ttccctaactgcagaaattcaaggtacacaccatcatgctaagtttatgt
ggtgctgggaatcaagcccagggctgaatgcatactagaaaagcactgta
ccatctgagttatacccccaccttcatcctgaacttatgttagcttttcc
atgtctacttggcaacaacattggcagagcacaatggatgaaagggagtt
aacattttcagtggatgggatgtttactaaatgccatgtccagagttctt
ttatctcaaatgcatccaaatcttctgagtagactgaggtcatagtttac
ttatccatacttccctttcatctcctttgcctctcacattaacttatgcc
acatgttctagagtcagactgctttggtgtgaagcctaggcctgctactt
accactcctcagtttatttgtcctaagtggaagagtatcatccctacctc
tttagtcttatgaagagtgggtaaagtaaacattgtagaacgtacagcac
atgtatctcttgaagatggaaaatgcccaggtattattggtaattaaagt
ttcgaattccaagtataaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_18581123_18582244
seq2: B6Ng01-151F02.g_66_1186

seq1  GAATTCATTAGGAGGGACCAAATTAGCTTGGTGGGAAATTATCCTTGGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTAGGAGGGACCAAATTAGCTTGGTGGGAAATTATCCTTGGTG  50

seq1  ACAATGCTGAGCTGTCTCTGTCATCAGGAAAAAAAAATCCACATCTATTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGCTGAGCTGTCTCTGTCATCAGGAAAAAAAAATCCACATCTATTG  100

seq1  CAATGAAGTCTAATAGTGACAGAGAACTTCTGAGACATTAAAAGAAGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGAAGTCTAATAGTGACAGAGAACTTCTGAGACATTAAAAGAAGAAA  150

seq1  TAACAAAAATGTTAAAATCAAAGCAGAACATGAGCAAAGAAGTGGTAGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAAAAATGTTAAAATCAAAGCAGAACATGAGCAAAGAAGTGGTAGGG  200

seq1  TATCACGTAGACTTCAAAAACCAAAACAACAACCAAATATGTTATCTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCACGTAGACTTCAAAAACCAAAACAACAACCAAATATGTTATCTTCT  250

seq1  AGGCAAGCATGAGCTATCAGTGTATGTGGGAAAGGTAAGAACCAACAGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAGCATGAGCTATCAGTGTATGTGGGAAAGGTAAGAACCAACAGGC  300

seq1  ACCATTTCAATTTAGAATAGGATAAGTTTGTGTTTTAAGGGATCTAGGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTTCAATTTAGAATAGGATAAGTTTGTGTTTTAAGGGATCTAGGTT  350

seq1  TTCTTTAGGGGATCAGATAGCTTTTTTGCCTCTTAAAATCTAAGAGCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTAGGGGATCAGATAGCTTTTTTGCCTCTTAAAATCTAAGAGCTTT  400

seq1  GCTTCATACATACATACACACACACACACACACACACACACATATATATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCATACATACATACACACACACACACACACACACACACATATATATA  450

seq1  TATATATATATATATATATATATATATATATATATAGGCATACAGTTGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATATATATATATATATATATATATATATAGGCATACAGTTGAG  500

seq1  CTACCTAGGTTATTCATCTTACATTTGAATTTATCATCTCTTTGCCTTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTAGGTTATTCATCTTACATTTGAATTTATCATCTCTTTGCCTTTA  550

seq1  TTCCCTAACTGCAGAAATTCAAGGTACACACCATCATGCTAAGTTTATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTAACTGCAGAAATTCAAGGTACACACCATCATGCTAAGTTTATGT  600

seq1  GGTGCTGGGAATCAAGCCCAGGGCTGAATGCATACTAGAAAAGCACTGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCTGGGAATCAAGCCCAGGGCTGAATGCATACTAGAAAAGCACTGTA  650

seq1  CCATCTGAGTTATACCCCCACCTTCATCCTGAACTTATGTTAGCTTTTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTGAGTTATACCCCCACCTTCATCCTGAACTTATGTTAGCTTTTCC  700

seq1  ATGTCTACTTGGCAACAACATTGGCAGAGCACAATGGATGAAAGGGAGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTACTTGGCAACAACATTGGCAGAGCACAATGGATGAAAGGGAGTT  750

seq1  AACATTTTCAGTGGAT-GGATGTTTACTAAATGCCATGTCCAGAGTTCTT  799
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AACATTTTCAGTGGATGGGATGTTTACTAAATGCCATGTCCAGAGTTCTT  800

seq1  TTATCTCAAATGCATCCAAATCTTCTGAAGTAGACTGAGGTCATAGTTTA  849
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TTATCTCAAATGCATCCAAATCTTCTG-AGTAGACTGAGGTCATAGTTTA  849

seq1  CTTATCCATACTTCCCTTTTCATCTCCTTTGCCTCTCACATTAACTTTAT  899
      |||||||||||||||| |||||||||||||||||||||||||||| ||||
seq2  CTTATCCATACTTCCC-TTTCATCTCCTTTGCCTCTCACATTAAC-TTAT  897

seq1  G-CACATGTTCTAGAGTCAGACTGCTTTGGTGTGAAGCCTAGTGCTTGCT  948
      | |||||||||||||||||||||||||||||||||||||||| || ||||
seq2  GCCACATGTTCTAGAGTCAGACTGCTTTGGTGTGAAGCCTAG-GCCTGCT  946

seq1  ACTTACCACT-CTCAGTTTATTTGTCCTTAAGTTGGGAAGAGTAATCAAT  997
      |||||||||| |||||||||||||||| |||||  |||||||| ||||  
seq2  ACTTACCACTCCTCAGTTTATTTGTCC-TAAGT--GGAAGAGT-ATCATC  992

seq1  CCTACCTCTTAAGTTCTTATGAAGAGTGGGTAAAGTAAACATTGTAGAAC  1047
      |||||||||| || ||||||||||||||||||||||||||||||||||||
seq2  CCTACCTCTTTAG-TCTTATGAAGAGTGGGTAAAGTAAACATTGTAGAAC  1041

seq1  GTACAGCACAGG---ACCCTGAAGATAGAAAATGCCCAG----TATATGT  1090
      |||||||||| |     | ||||||| ||||||||||||    |||  ||
seq2  GTACAGCACATGTATCTCTTGAAGATGGAAAATGCCCAGGTATTATTGGT  1091

seq1  AAATAAAAGTTTTATGATTTCAAGTATAAAAA  1122
      || ||||   |||   ||| ||||||||||||
seq2  AATTAAA--GTTTCGAATTCCAAGTATAAAAA  1121