BAC Information

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BAC

Clone NameB6Ng01-151I12
Chromosome1 (Build37)
Map Location 18,915,486 - 19,024,709
singlet/doubletdoublet
Overlap geneEG435611
Upstream geneLOC665564, LOC100040126, Crisp4, EG574082, EG654460, Defb17, LOC383499
Downstream geneLOC100040189, Tcfap2d, LOC100040413, Tcfap2b, LOC100040198, LOC226901
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151I12.bB6Ng01-151I12.g
ACCDH947327DH947328
length686530
definitionDH947327|Mus musculus domesticus DNA, BAC clone: B6Ng01-151I12, 5' end.DH947328|Mus musculus domesticus DNA, BAC clone: B6Ng01-151I12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(19,024,024 - 19,024,709)(18,915,486 - 18,916,019)
sequence
gaattctatgcagtgaatcaaaacaatgattacatgaaattcacagtcaa
atggataaaacttgaaatatcatcctgagtgaggtaacaaagacacaaaa
gaacacacatggtgagtacttattaataagtggatattagccctgaaact
cacaatgcccaagatacaacccacagaccatatagagagtagaaggaaag
gaagaccaggatgtggctgcttcagtactgccttgagggatgaataggac
cattgtgggaggtggaaggcgatggaggcagggaagggagcataagggtg
taagtttttcaagatgctgatttaattttttcaggttgtaaactccacaa
atagaatcatttttgcaaacttttatatactttaaacctcttaatttaaa
aaatattctttctttttttctttctttctttctttctttctttctttctt
tctttctttctttctttctttcttttctattggatattctctttattgac
taaaaatattcctttaatcatcgaaaaattccatacattttgaagtagag
gctgttctccactctgttgcctgcctgcctgtgaatcccgtttccctaac
tggactaccttgtctggtctcagtaggagaggatgtgcctagttctgaag
tgacttgatatgctgggggtgatggtggtggttgta
tctctattttcccttttgataatttttttaaaagccttacagtttaagtc
tccactctaggattgatctttatatcaagatttaagtatataagagagtg
atatataccaggcaaggcaatacatacctttaattttggcaaaggaaagt
taaaaagtatggaactctttgaggctagtgagatctatgtagtaagttct
tggcctgctatggttacagttacctagttacaactttgccaataacagtg
atgatgatgatgatggtgatgatgatggtaatggtgatagagttaaatgc
atgtaagagaaaagatttgactatatgctggcaacaaacaacgaggcact
tcctttggtcaatttaattttactttactgtcttatattgttttagaaat
ggaatcttgctgtgctactcagacttatgtcaaattcctgggcacaagat
gtgttcctgtttctgtcttctgagtagctgagactactcttgatactact
catgttttttttgttattccattggtgaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_19024024_19024709
seq2: B6Ng01-151I12.b_47_732 (reverse)

seq1  TACAACCACCACCATCACCCCCAGCATATCAAGTCACTTCAGAACTAGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAACCACCACCATCACCCCCAGCATATCAAGTCACTTCAGAACTAGGC  50

seq1  ACATCCTCTCCTACTGAGACCAGACAAGGTAGTCCAGTTAGGGAAACGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCTCTCCTACTGAGACCAGACAAGGTAGTCCAGTTAGGGAAACGGG  100

seq1  ATTCACAGGCAGGCAGGCAACAGAGTGGAGAACAGCCTCTACTTCAAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACAGGCAGGCAGGCAACAGAGTGGAGAACAGCCTCTACTTCAAAAT  150

seq1  GTATGGAATTTTTCGATGATTAAAGGAATATTTTTAGTCAATAAAGAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGGAATTTTTCGATGATTAAAGGAATATTTTTAGTCAATAAAGAGAA  200

seq1  TATCCAATAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCAATAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA  250

seq1  GAAAGAAAGAAAGAAAGAAAAAAAGAAAGAATATTTTTTAAATTAAGAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAAGAAAGAAAGAAAAAAAGAAAGAATATTTTTTAAATTAAGAGG  300

seq1  TTTAAAGTATATAAAAGTTTGCAAAAATGATTCTATTTGTGGAGTTTACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAGTATATAAAAGTTTGCAAAAATGATTCTATTTGTGGAGTTTACA  350

seq1  ACCTGAAAAAATTAAATCAGCATCTTGAAAAACTTACACCCTTATGCTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGAAAAAATTAAATCAGCATCTTGAAAAACTTACACCCTTATGCTCC  400

seq1  CTTCCCTGCCTCCATCGCCTTCCACCTCCCACAATGGTCCTATTCATCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCTGCCTCCATCGCCTTCCACCTCCCACAATGGTCCTATTCATCCC  450

seq1  TCAAGGCAGTACTGAAGCAGCCACATCCTGGTCTTCCTTTCCTTCTACTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGCAGTACTGAAGCAGCCACATCCTGGTCTTCCTTTCCTTCTACTC  500

seq1  TCTATATGGTCTGTGGGTTGTATCTTGGGCATTGTGAGTTTCAGGGCTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATATGGTCTGTGGGTTGTATCTTGGGCATTGTGAGTTTCAGGGCTAA  550

seq1  TATCCACTTATTAATAAGTACTCACCATGTGTGTTCTTTTGTGTCTTTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCACTTATTAATAAGTACTCACCATGTGTGTTCTTTTGTGTCTTTGT  600

seq1  TACCTCACTCAGGATGATATTTCAAGTTTTATCCATTTGACTGTGAATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCACTCAGGATGATATTTCAAGTTTTATCCATTTGACTGTGAATTT  650

seq1  CATGTAATCATTGTTTTGATTCACTGCATAGAATTC  686
      ||||||||||||||||||||||||||||||||||||
seq2  CATGTAATCATTGTTTTGATTCACTGCATAGAATTC  686

seq1: chr1_18915486_18916019
seq2: B6Ng01-151I12.g_65_599

seq1  GAATTCTCTCTATTTTCCCTTTTGATAATTTTTTTAAAAGCCTTACAGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTATTTTCCCTTTTGATAATTTTTTTAAAAGCCTTACAGTT  50

seq1  TAAGTCTCCACTCTAGGATTGATCTTTATATCAAGATTTAAGTATATAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTCTCCACTCTAGGATTGATCTTTATATCAAGATTTAAGTATATAAG  100

seq1  AGAGTGATATATACCAGGCAAGGCAATACATACCTTTAATTTTGGCAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGATATATACCAGGCAAGGCAATACATACCTTTAATTTTGGCAAAG  150

seq1  GAAAGTTAAAAAGTATGGAACTCTTTGAGGCTAGTGAGATCTATGTAGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTTAAAAAGTATGGAACTCTTTGAGGCTAGTGAGATCTATGTAGTA  200

seq1  AGTTCTTGGCCTGCTATGGTTACAGTTACCTAGTTACAACTTTGCCAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTTGGCCTGCTATGGTTACAGTTACCTAGTTACAACTTTGCCAATA  250

seq1  ACAGTGATGATGATGATGATGGTGATGATGATGGTAATGGTGATAGAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGATGATGATGATGATGGTGATGATGATGGTAATGGTGATAGAGTT  300

seq1  AAATGCATGTAAGAGAAAAGATTTGACTATATGCTGGCAACAAACAACGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCATGTAAGAGAAAAGATTTGACTATATGCTGGCAACAAACAACGA  350

seq1  GGCACTTCCTTTGGTCAATTTAATTTTACTTTACTGTCTTATATTGTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACTTCCTTTGGTCAATTTAATTTTACTTTACTGTCTTATATTGTTTT  400

seq1  AGAAATGGAATCTTGCTGTGCTACTCAGACTTATGTCAAATTCCTGGGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGGAATCTTGCTGTGCTACTCAGACTTATGTCAAATTCCTGGGCA  450

seq1  CAAGATGTGTTCCTGTTTCTGTCTTCTGAGTAGCTGAGACTACGCATGAG  500
      ||||||||||||||||||||||||||||||||||||||||||| | ||| 
seq2  CAAGATGTGTTCCTGTTTCTGTCTTCTGAGTAGCTGAGACTACTCTTGAT  500

seq1  ACTACACATG-GCTGTATGTTATTCCATTGGTGAA  534
      ||||| ||||   | | ||||||||||||||||||
seq2  ACTACTCATGTTTTTTTTGTTATTCCATTGGTGAA  535