BAC Information

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BAC

Clone NameB6Ng01-151K04
Chromosome1 (Build37)
Map Location 112,350,321 - 112,351,467
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666508, Cdh7
Downstream geneLOC100041429, EG626652, Cdh19
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151K04.bB6Ng01-151K04.g
ACCDH947406DH947407
length1,1281,061
definitionDH947406|Mus musculus domesticus DNA, BAC clone: B6Ng01-151K04, 5' end.DH947407|Mus musculus domesticus DNA, BAC clone: B6Ng01-151K04, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactcataggcaacaaaatcttcaggtataaaatttaccattaca
atacattgcaacaggcaatatattttatgattgagggttaccacaacatg
aggaacttcattaaaagatcactggattaggaagcttgtacacagttgct
tgatactaaagttttatattattcactataactaataaataattaatcag
gtgtttgtttagagaaataagtccatacaacagattaaagacagaagttg
agtatgcttataggcagactaggaaaaattaattttcagaattcaatgag
aaagatatccatcttctgttctcctggataagtccacatattactattaa
aatgctatagaaagaccatagaatttaaattgaaatatgcaaagaaaaac
tttgaagttttaacaaaattttagagtgaacacacacaaaatatggtaat
atgacattttacataaaagtgaaacatgtatcaactataattataggatg
attaaatgggacttgtcaaaattaaaggcttatgtgtactgaaacataac
attaagtgggggcaaatgccagctgaagactagaaaatttaggtgaaagt
atgtgtattaatgtctcatatgcataataaaaagcatggcacaggtaatg
ccactgatgattagcaaaatatgggagaatagtctttaaaaatatcaaca
tcaaatacaaatgaaatgtctcatttagtatattcattttgtgccatctt
taaatcacattaaaacatgaatccaataataaaaagaattcttaatgtct
ttctctgtcaaactaaaatgtcctacacagtctaaaacatagacatagca
tatacatttttattgttcttttattgaaactagtatttttcattcactgt
attctgattacaattttccctctctcatctcatttgaaatcttttcactt
tcttctatataccgtttctctttaaaacttacaggtatctaagaatgatc
taaagaatagataaacaaacagcaaaatacatatactattatcaaaatga
gattatagaagacaagaagtacatgaaatgcataaacttatagagaacat
acatgatcatatgttcagaatccaatga
gaattctttgtttagctttgtagccccttttttaataggattatttgatt
ttctggagtccaccttcttgagttctttatatatattggatattagtccc
ctataaaatttaggattggtaaagatactttcacaatctgttggtgccct
ttctgtcttattgacagtgtcttttgccttacaaaagctttgcaatttta
tgaagacccatttgtccattcctgatcttacagcacaagccattgctgtt
ctgatcagaaattttccccctgtgcccatatctttgacgcttttccccat
tttctcctctataagtttcagtgtctctggttttatgtggagttccttga
tcctcttagacttgagctttgtacaaggagataagaatggatcaacttgc
attcttcctacatgataatcaccagttgtaccagcaccatttgttgaata
tgctgtctttttgccactgaatgttttagctcccttgtcaaaggtcaagt
gaccataggagtgtggattcatttctaggtcttcatttctatttcattgg
tctacatgtctgtccctatatcagtaccatgcagttttttatcacaattg
ctctgtagtacagcttgaggtcaggaatggagattctaccagaggttctt
ttatcattgagaatagtttttgctatattaggttttttgttattccagat
gaatttgccaattgtcctttctaactctgtgaagaattgcattggaattt
tgatggggattacattaaatctgtagattgctttagggagggtagccatt
ttttactatattggttcctaccaatccatgagcatgggggatcttttcat
cttccgagatcttctttgattttctatcttcagagacttgaagttcttat
catacagatctttcactttcttttgttagtggtcataccaaagcatttcc
tattatttgtgactattgtgaagggtgttgtttctcaatttttttttcaa
cctgattatcctttgtagataaggcaactgattttgtttggaattaattt
tatatccaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_112350321_112351467
seq2: B6Ng01-151K04.b_44_1171

seq1  GAATTCACTCATAGGCAACAAAATCTTCAGGTATAAAATTTACCATTACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCATAGGCAACAAAATCTTCAGGTATAAAATTTACCATTACA  50

seq1  ATACATTGCAACAGGCAATATATTTTATGATTGAGGGTTACCACAACATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATTGCAACAGGCAATATATTTTATGATTGAGGGTTACCACAACATG  100

seq1  AGGAACTTCATTAAAAGATCACTGGATTAGGAAGCTTGTACACAGTTGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACTTCATTAAAAGATCACTGGATTAGGAAGCTTGTACACAGTTGCT  150

seq1  TGATACTAAAGTTTTATATTATTCACTATAACTAATAAATAATTAATCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATACTAAAGTTTTATATTATTCACTATAACTAATAAATAATTAATCAG  200

seq1  GTGTTTGTTTAGAGAAATAAGTCCATACAACAGATTAAAGACAGAAGTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTGTTTAGAGAAATAAGTCCATACAACAGATTAAAGACAGAAGTTG  250

seq1  AGTATGCTTATAGGCAGACTAGGAAAAATTAATTTTCAGAATTCAATGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGCTTATAGGCAGACTAGGAAAAATTAATTTTCAGAATTCAATGAG  300

seq1  AAAGATATCCATCTTCTGTTCTCCTGGATAAGTCCACATATTACTATTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATATCCATCTTCTGTTCTCCTGGATAAGTCCACATATTACTATTAA  350

seq1  AATGCTATAGAAAGACCATAGAATTTAAATTGAAATATGCAAAGAAAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTATAGAAAGACCATAGAATTTAAATTGAAATATGCAAAGAAAAAC  400

seq1  TTTGAAGTTTTAACAAAATTTTAGAGTGAACACACACAAAATATGGTAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAGTTTTAACAAAATTTTAGAGTGAACACACACAAAATATGGTAAT  450

seq1  ATGACATTTTACATAAAAGTGAAACATGTATCAACTATAATTATAGGATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACATTTTACATAAAAGTGAAACATGTATCAACTATAATTATAGGATG  500

seq1  ATTAAATGGGACTTGTCAAAATTAAAGGCTTATGTGTACTGAAACATAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAATGGGACTTGTCAAAATTAAAGGCTTATGTGTACTGAAACATAAC  550

seq1  ATTAAGTGGGGGCAAATGCCAGCTGAAGACTAGAAAATTTAGGTGAAAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGTGGGGGCAAATGCCAGCTGAAGACTAGAAAATTTAGGTGAAAGT  600

seq1  ATGTGTATTAATGTCTCATATGCATAATAAAAAGCATGGCACAGGTAATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTATTAATGTCTCATATGCATAATAAAAAGCATGGCACAGGTAATG  650

seq1  CCACTGATGATTAGCAAAATATGGGAGAATAGTCTTTAAAAATATCAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGATGATTAGCAAAATATGGGAGAATAGTCTTTAAAAATATCAACA  700

seq1  TCAAATACAAATGAAATGTCTCATTTAGTATATTCATTTTGTGCCATCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATACAAATGAAATGTCTCATTTAGTATATTCATTTTGTGCCATCTT  750

seq1  TAAATCACATTAAAACATGAATCCAATAATAAAAAGAATTCTTAATGTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCACATTAAAACATGAATCCAATAATAAAAAGAATTCTTAATGTCT  800

seq1  TTCTCTGTCAAACTAAAATGTCCTACACAGTCTAAAACATAGACATAGCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGTCAAACTAAAATGTCCTACACAGTCTAAAACATAGACATAGCA  850

seq1  TATACATTTTTATTGTTCTTTTATTGAAACTAGTATTTTTCATTCACTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACATTTTTATTGTTCTTTTATTGAAACTAGTATTTTTCATTCACTGT  900

seq1  ATTCTGATTACAATTTTCCCTCTCTCATCTCATTTGAAATCTTTTCACTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGATTACAATTTTCCCTCTCTCATCTCATTTGAAATCTTTTCACTT  950

seq1  TCTTCTATATACCGTTTCTCCTTTAAAAACTTACAGGTATCTAAAGAATG  1000
      ||||||||||||||||||||  || ||||||||||||||||| |||||||
seq2  TCTTCTATATACCGTTTCTC--TTTAAAACTTACAGGTATCT-AAGAATG  997

seq1  ATCCTAAAAGAAAATAAGATAAAACAAACAAGCAAAAATACAATAATACT  1050
      |||   ||||||    |||| |||||||| ||| ||||||||   |||||
seq2  ATC--TAAAGAA---TAGAT-AAACAAAC-AGC-AAAATACA--TATACT  1037

seq1  ATTAACCAAAAATGAGAATTATTAGAGACAAAGAAAAGTACATGAAATGC  1100
      |||| |  |||||||| |||||   |||||   | |||||||||||||||
seq2  ATTATC--AAAATGAG-ATTATAGAAGACA---AGAAGTACATGAAATGC  1081

seq1  ATAAACTTATAGAG-ACATACATGATCATATGTTCAGGATTCCAATGA  1147
      |||||||||||||| ||||||||||||||||||||| || ||||||||
seq2  ATAAACTTATAGAGAACATACATGATCATATGTTCA-GAATCCAATGA  1128