BAC Information

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BAC

Clone NameB6Ng01-151O16
Chromosome1 (Build37)
Map Location 121,017,046 - 121,147,274
singlet/doubletdoublet
Overlap geneLOC666838, LOC100041778
Upstream geneLOC637083, Tsn, Mki67ip, Clasp1, Tcfcp2l1, LOC100041753, Gli2
Downstream geneInhbb, Ralb, Tmem185b, Epb4.1l5, Ptpn4, LOC100042447, LOC666870, LOC100041863, Tmem177, Gm101, Sctr, Tmem37, Dbi, 3110009E18Rik, Steap3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151O16.bB6Ng01-151O16.g
ACCDH947619DH947620
length1,130197
definitionDH947619|Mus musculus domesticus DNA, BAC clone: B6Ng01-151O16, 5' end.DH947620|Mus musculus domesticus DNA, BAC clone: B6Ng01-151O16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(121,017,046 - 121,018,202)(121,147,078 - 121,147,274)
sequence
gaattccagatctggtggctgatgctgtcaactcaagaggatctagaatc
acccagtaaacaagcctctgggcacgtctgtgagggagagtctagattag
tctaattaaggcagaaaatctcaccctaaaggagggtagcaacatcccat
gggctgggggcctggactggaagagagagctctcagacaccagctttcat
gtctctttacaaaatccctgactgtggatgtggggttccagctgcctcat
ccctctgctgccatgtcttccccaccatgatggactgtatccatgatcta
tgggccaaagtcaactgtccttcaattgtcttttgccaggcatttcatca
cagcaaggagaaaaaaaatagctaatacagcaggaagatggcactctcct
gatccctgaaattgagtggattttggaaggccataggaacaaagcggaac
cagcatggcttctagtatgaagttcatcagtcactttgtggctcactaag
acaatcatcacttacctcagcacgtatattctttctgcatagcatttttc
cttgtttatttttatctccaattataatcttaactctgcaatggccctag
acttggagggaataagaaaaacatgaaaccaaaaacccacagcaagagca
aaacttgaagatatgttgagagagaccggggctcccctggggatgactca
agggtctgctgggcagagctatccacagtcaccaatggtgatctcagggt
gttatggcttccataacaccttcccaaagattgcatgcttgtcgggccac
ccaggcttggtagtatcgatgaagtggataagataccagaacctatatgc
tcaggataaagttttcaccctctcttcccttagacacatttgccactagt
gtcacaacccaagggcttggaaagaacctagtagggttaccatgattgac
agcaggcatatatggggcagtggatctctgtggtttggggctaggagatg
ttcagcagtagagagtttattgctctgagagaccaggcttggtccaggac
tacaacaggtagctcaacagccagatctctagtctacagtcttagagctc
catggtcatgtgtgcacttacatgtggcat
ctgggcacgctttgtgaacctttagttcaaattctcactcagaaactctc
aactaatgacaacaggtgaggtacttgattcatctaaggcccatgttctg
ggttttaggcgaggattagacaaatagttttaaaaaaagatttactttat
tactattattagtgtgtgtgtgtgtgtgtgtaggtttgtgtgtgttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_121017046_121018202
seq2: B6Ng01-151O16.b_46_1175

seq1  GAATTCCAGATCTGGTGGCTGATGCTGTCAACTCAAGAGGATCTAGAATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGATCTGGTGGCTGATGCTGTCAACTCAAGAGGATCTAGAATC  50

seq1  ACCCAGTAAACAAGCCTCTGGGCACGTCTGTGAGGGAGAGTCTAGATTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGTAAACAAGCCTCTGGGCACGTCTGTGAGGGAGAGTCTAGATTAG  100

seq1  TCTAATTAAGGCAGAAAATCTCACCCTAAAGGAGGGTAGCAACATCCCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATTAAGGCAGAAAATCTCACCCTAAAGGAGGGTAGCAACATCCCAT  150

seq1  GGGCTGGGGGCCTGGACTGGAAGAGAGAGCTCTCAGACACCAGCTTTCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGGGGGCCTGGACTGGAAGAGAGAGCTCTCAGACACCAGCTTTCAT  200

seq1  GTCTCTTTACAAAATCCCTGACTGTGGATGTGGGGTTCCAGCTGCCTCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTTTACAAAATCCCTGACTGTGGATGTGGGGTTCCAGCTGCCTCAT  250

seq1  CCCTCTGCTGCCATGTCTTCCCCACCATGATGGACTGTATCCATGATCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTGCTGCCATGTCTTCCCCACCATGATGGACTGTATCCATGATCTA  300

seq1  TGGGCCAAAGTCAACTGTCCTTCAATTGTCTTTTGCCAGGCATTTCATCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCCAAAGTCAACTGTCCTTCAATTGTCTTTTGCCAGGCATTTCATCA  350

seq1  CAGCAAGGAGAAAAAAAATAGCTAATACAGCAGGAAGATGGCACTCTCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAAGGAGAAAAAAAATAGCTAATACAGCAGGAAGATGGCACTCTCCT  400

seq1  GATCCCTGAAATTGAGTGGATTTTGGAAGGCCATAGGAACAAAGCGGAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCCTGAAATTGAGTGGATTTTGGAAGGCCATAGGAACAAAGCGGAAC  450

seq1  CAGCATGGCTTCTAGTATGAAGTTCATCAGTCACTTTGTGGCTCACTAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATGGCTTCTAGTATGAAGTTCATCAGTCACTTTGTGGCTCACTAAG  500

seq1  ACAATCATCACTTACCTCAGCACGTATATTCTTTCTGCATAGCATTTTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCATCACTTACCTCAGCACGTATATTCTTTCTGCATAGCATTTTTC  550

seq1  CTTGTTTATTTTTATCTCCAATTATAATCTTAACTCTGCAATGGCCCTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTTATTTTTATCTCCAATTATAATCTTAACTCTGCAATGGCCCTAG  600

seq1  ACTTGGAGGGAATAAGAAAAACATGAAACCAAAAACCCACAGCAAGAGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGAGGGAATAAGAAAAACATGAAACCAAAAACCCACAGCAAGAGCA  650

seq1  AAACTTGAAGATATGTTGAGAGAGACCGGGGCTCCCCTGGGGATGACTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTGAAGATATGTTGAGAGAGACCGGGGCTCCCCTGGGGATGACTCA  700

seq1  AGGGTCTGCTGGGCAGAGCTATCCACAGTCACCAATGGTGATCTCAGGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCTGCTGGGCAGAGCTATCCACAGTCACCAATGGTGATCTCAGGGT  750

seq1  GTTATGGCTTCCATAACACCTTCCCAAAGATTGCATGCTTGTCGGGCCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATGGCTTCCATAACACCTTCCCAAAGATTGCATGCTTGTCGGGCCAC  800

seq1  CCAGGCTTGGTAGTATCGATGAAGTGGATAAGATACCAGAACCTATATGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCTTGGTAGTATCGATGAAGTGGATAAGATACCAGAACCTATATGC  850

seq1  TCAGGATAAAGTTTTCACCCTCTCTTCCCTTAGACACATTTGCCACTAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGATAAAGTTTTCACCCTCTCTTCCCTTAGACACATTTGCCACTAGT  900

seq1  GTCACAACCCAAGGGCTTGGAAAGAACCTAGTAGGGTTAACCATGATTGA  950
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GTCACAACCCAAGGGCTTGGAAAGAACCTAGTAGGGTT-ACCATGATTGA  949

seq1  CAGCAAGGCAATATATGGGGCAGTGGGATCTTCTGTGGTTTGGGGCTAGG  1000
      |||| |||| |||||||||||||| ||||| ||||||||||||||||| |
seq2  CAGC-AGGC-ATATATGGGGCAGT-GGATC-TCTGTGGTTTGGGGCTA-G  994

seq1  GAGATGGTTCAGCAGTTAAGAGAGTTTATTGCTCTTGGAGAGACCCAGGC  1050
      ||||| ||||||||||  |||||||||||||||||  |||||| ||||||
seq2  GAGAT-GTTCAGCAGT--AGAGAGTTTATTGCTCT--GAGAGA-CCAGGC  1038

seq1  TTTGGTTCCAAGAACCTACAACAGGTAGCTCATACCAGCCAAGATCTCTA  1100
      ||  | |||| ||  ||||||||||||||||  | ||||| |||||||||
seq2  TT--GGTCCAGGA--CTACAACAGGTAGCTC--AACAGCC-AGATCTCTA  1081

seq1  GGTCTACAGGCCCTAAGAGCTCCACTGGTCTATGTG-GCACTTGTACACA  1149
       ||||||||   || ||||||||| ||||| ||||| ||||||    |||
seq2  -GTCTACAG--TCTTAGAGCTCCA-TGGTC-ATGTGTGCACTT----ACA  1122

seq1  TGTGGCAT  1157
      ||||||||
seq2  TGTGGCAT  1130

seq1: chr1_121147078_121147274
seq2: B6Ng01-151O16.g_71_267 (reverse)

seq1  CAACACACACAAACCTACACACACACACACACACACTAATAATAGTAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACACACAAACCTACACACACACACACACACACTAATAATAGTAATA  50

seq1  AAGTAAATCTTTTTTTAAAACTATTTGTCTAATCCTCGCCTAAAACCCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAATCTTTTTTTAAAACTATTTGTCTAATCCTCGCCTAAAACCCAG  100

seq1  AACATGGGCCTTAGATGAATCAAGTACCTCACCTGTTGTCATTAGTTGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGGGCCTTAGATGAATCAAGTACCTCACCTGTTGTCATTAGTTGAG  150

seq1  AGTTTCTGAGTGAGAATTTGAACTAAAGGTTCACAAAGCGTGCCCAG  197
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCTGAGTGAGAATTTGAACTAAAGGTTCACAAAGCGTGCCCAG  197