BAC Information

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BAC

Clone NameB6Ng01-151O17
Chromosome1 (Build37)
Map Location 136,900,606 - 136,901,413
singlet/doubletsinglet
Overlap geneLgr6
Upstream geneLOC100042358, Fmod, Btg2, EG667414, Chit1, Chi3l1, Mybph, Adora1, Myog, Ppfia4, LOC100042382, Tmem183a, 4933406M09Rik, Cyb5r1, Adipor1, Klhl12, Rabif, 4931440L10Rik, Jarid1b, LOC100042418, Syt2, Ppp1r12b, Ube2t
Downstream genePtprv, LOC100042432, Ptpn7, Arl8a, Gpr37l1, LOC100043064, Elf3, Rnpep, Timm17a, Lmod1, Tmem58, Ipo9, Nav1, EG215714, LOC623327, Csrp1, Phlda3, Tnni1, Lad1, Tnnt2, LOC100042477, Pkp1, 9830123M21Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151O17.bB6Ng01-151O17.g
ACCDH947621DH947622
length1,155807
definitionDH947621|Mus musculus domesticus DNA, BAC clone: B6Ng01-151O17, 5' end.DH947622|Mus musculus domesticus DNA, BAC clone: B6Ng01-151O17, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaaactcaaatggccgagaagcacctaaaagaaat
gttcaacatccttagtcattagggaaatgcaaatcaaaacaaccctgaga
ttccacctcacaccagtcagaatgctaagatcaaaaactcaggtgacagg
agatgttagcaaggctgtggagaaagaggagccctcttccattgctggtg
ggattgcaagctggtacaaccactctggaaatcagtctggcggtttttca
gaaaattggacatagtactacccgaggaccaagctacacctctcctgggc
atatacccagaaattctaaccagtaataaaaacacatgctccactatgtt
catagcagccttatttgtaatagccatgagctggaaacaacccaaatgtc
cctcaacagaggaatggatacagaaaatgtggtacatctacacaatggag
tactactcagctattaaaaacaatgatttcatgaaattcgcaggcaaaag
gatggatatagaaaatatcatcctgagtgaggtaactcagtcacaaaaga
atacacatggtatgcactcactgataagtggatattaggcaaagagcatg
gaatactcacgatacaactcatggatcacatgaagctcaaaaggaaggaa
gaccaaagagtggatgtttcagtcctacttagaaagggggacaaaataat
caagggaagtagagggtgagagggacttgagaggaagagagagggggaaa
gaggagaagaatcacgtatggcaggagatataagatgtacagagggtcag
gaaattgaacagagatatgtagcaatgggggatggggaactgggggtagc
aaccagaaagcccagatgccaggaagcaagagcctcctatgactgtatgg
ggatgacattagctgaactacttcccaaaggggcggagggaaaacccgtc
aggaccgtatccagaggttaggcatgctcccagtgaggatgtccaaattt
tagccagattgctctgtctaaagaaatcaggaacaaagattgagcagaga
ctgatggaaagccattcgagactgccccactaaggatcatcccacatgcc
aaactgactggacacttctgtatgctagtatgcttgcgtaacgtagacct
gatac
gaattcagaatgactgctcactgtggactgagttctcctgagcctggtct
cagtggatgagtgggattcaggtgacaatgagggtggaagggaacagttg
ttttagtcagtagagcagtacaaagcacagacctgacaggaagtggttaa
ggcagaaagaatgaccacagaagggacaccaaccttgatgggggtgtgct
cagtgacctcagagatctaatatacagctatactagaatccaaataggga
gacaaggagcttcatggttttcttttttggagaaaaaaaaggtacacatt
taggtatgagtccatccatccatttatccaaccatgcatccatccatgca
tgcatgcatccatcatctactgagagaaacctgcttgaggacagggcctc
tatcatgtaaatttctcagcctctcagaacttaacctagcctaagacatg
aaagagatattccaataaacatggtgagtagaaggaaagaaccaacgagc
cttggtgggcagcactggccagagatatctgaggaggagccttgagtgac
tgagcatggaggtgaaagggatgatgggaaacaggagatggagagaagtg
agcatgtgctaggtacgacacagaaagccagagacttccagtaggagggg
gagtgttgagaggttgggaaagcttcctagcgacacaaaacacactgttc
cgggcttccagacacccggtggggaacttcattgctcaccaccatggatg
caatctgtggcactgaccggactctggcctttatttcctccattgttctg
tccccac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_136900606_136901413
seq2: B6Ng01-151O17.g_70_876 (reverse)

seq1  GTGGGGACAGAGCAATGGAGGAGATAAAGGACAGAGTCCGGTCAGTGGCC  50
      ||||||||||| |||||||||| ||||||| ||||||||||||||| |||
seq2  GTGGGGACAGAACAATGGAGGAAATAAAGGCCAGAGTCCGGTCAGT-GCC  49

seq1  ACAGATTGCATCCATGGGTGGTGAGCAATGAAGTTCCCCACCGGGTGTCT  100
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  ACAGATTGCATCCAT-GGTGGTGAGCAATGAAGTTCCCCACCGGGTGTCT  98

seq1  GGAAGCCCGGAACAGTGTG-TTTGTGTCGCTAGGAAGCTTTCCCAACCTC  149
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GGAAGCCCGGAACAGTGTGTTTTGTGTCGCTAGGAAGCTTTCCCAACCTC  148

seq1  TCAACACTCCCCCTCCTACTGGAAGTCTCTGGCTTTCTGTGTCGTACCTA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACACTCCCCCTCCTACTGGAAGTCTCTGGCTTTCTGTGTCGTACCTA  198

seq1  GCACATGCTCACTTCTCTCCATCTCCTGTTTCCCATCATCCCTTTCACCT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATGCTCACTTCTCTCCATCTCCTGTTTCCCATCATCCCTTTCACCT  248

seq1  CCATGCTCAGTCACTCAAGGCTCCTCCTCAGATATCTCTGGCCAGTGCTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCTCAGTCACTCAAGGCTCCTCCTCAGATATCTCTGGCCAGTGCTG  298

seq1  CCCACCAAGGCTCGTTGGTTCTTTCCTTCTACTCACCATGTTTATTGGAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCAAGGCTCGTTGGTTCTTTCCTTCTACTCACCATGTTTATTGGAA  348

seq1  TATCTCTTTCATGTCTTAGGCTAGGTTAAGTTCTGAGAGGCTGAGAAATT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCTTTCATGTCTTAGGCTAGGTTAAGTTCTGAGAGGCTGAGAAATT  398

seq1  TACATGATAGAGGCCCTGTCCTCAAGCAGGTTTCTCTCAGTAGATGATGG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGATAGAGGCCCTGTCCTCAAGCAGGTTTCTCTCAGTAGATGATGG  448

seq1  ATGCATGCATGCATGGATGGATGCATGGTTGGATAAATGGATGGATGGAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATGCATGCATGGATGGATGCATGGTTGGATAAATGGATGGATGGAC  498

seq1  TCATACCTAAATGTGTACCTTTTTTTTCTCCAAAAAAGAAAACCATGAAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATACCTAAATGTGTACCTTTTTTTTCTCCAAAAAAGAAAACCATGAAG  548

seq1  CTCCTTGTCTCCCTATTTGGATTCTAGTATAGCTGTATATTAGATCTCTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTGTCTCCCTATTTGGATTCTAGTATAGCTGTATATTAGATCTCTG  598

seq1  AGGTCACTGAGCACACCCCCATCAAGGTTGGTGTCCCTTCTGTGGTCATT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCACTGAGCACACCCCCATCAAGGTTGGTGTCCCTTCTGTGGTCATT  648

seq1  CTTTCTGCCTTAACCACTTCCTGTCAGGTCTGTGCTTTGTACTGCTCTAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGCCTTAACCACTTCCTGTCAGGTCTGTGCTTTGTACTGCTCTAC  698

seq1  TGACTAAAACAACTGTTCCCTTCCACCCTCATTGTCACCTGAATCCCACT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTAAAACAACTGTTCCCTTCCACCCTCATTGTCACCTGAATCCCACT  748

seq1  CATCCACTGAGACCAGGCTCAGGAGAACTCAGTCCACAGTGAGCAGTCAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCACTGAGACCAGGCTCAGGAGAACTCAGTCCACAGTGAGCAGTCAT  798

seq1  TCTGAATTC  808
      |||||||||
seq2  TCTGAATTC  807