BAC Information

Click to search

BAC

Clone NameB6Ng01-152J23
Chromosome1 (Build37)
Map Location 150,510,155 - 150,564,217
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneLOC100042792, LOC435647
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152J23.bB6Ng01-152J23.g
ACCDH948152DH948153
length2881,149
definitionDH948152|Mus musculus domesticus DNA, BAC clone: B6Ng01-152J23, 5' end.DH948153|Mus musculus domesticus DNA, BAC clone: B6Ng01-152J23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(150,563,930 - 150,564,217)(150,510,155 - 150,511,302)
sequence
gaattcgtggttctttacattctttcctctctacattcttgtcaaaagtg
actttaaatatgtgatcaagtataaacaagaggagattatcctgactatt
tcttgtgatcagaatatggtctgaacaatgttagcaaaaggttacaaact
gaaaataaaatataaacaactggcaaggagaggggcatggaggtttgata
cccagaggaaggcttccccttctaagggggatgggggtaggacttacatg
aaggagtactgggaggagaggaagggatgatttggggt
gaattctacctcttgaaaatccttaatatagtttaaaggtatggcttaaa
aatatggtttaaatgcaaagtaaatttttctgaatttattatgtagaata
catagtataagttaatatttaattttcattaagcacctgagagattatta
gaaaatcctatgaacatttggaaaaatgttccaaaacaggagagagacta
cagtaaaaacatcattttccaagggcaccatatctattggtccatctgtc
tacatactggtctgtcactctgaaaaataatctagtaagtactttcttat
ttgtggaaagaatttaatatataactagaggagctgataaaatagaagta
ttgattttcaaaaagtgaagcatttctagaaatgttttagactggtaaca
agtctaaatcaatgatcaagaccttaaatatatttcagaaatattagtac
attaataattaagcaaaaagaaaatttaaattgtatatttagagaacata
aaaatactattttgtcttcattttctcatctcagggttttcctaggagat
tcacagcaaatataaaagtataattaaaatttgtttctttaaatattatg
tttctttgtattcttttgacatgtctagggtttaagcaaatatgtatatt
tacatgcaaaattatgttgtcacataaattttggaaagcattgtactgag
aactcaaatatgatacaggaaaatctcagtagatgaactaggttttatat
caacccatagtctttgctatatattacttaatctaatttattaaatgtga
taaatcctatgtcaagtctgcaggtttttttaataataaacagtaaaaca
cacattggtcagtgatttcttagtagtatatagtgtgttataagcatcag
aaaattttgagagcaaatagaaaacctactgatattgtttattctacctt
aaatactttaaaggaattaatttaagattattttaaataaaataaaaaag
tgttataaagaaaattttataaaatgtagttttttttagcatgcataatt
tgaacttttagttggaaatgacatttacattagaattgttgcctgttgga
ttactatacataattaaaatccaaggatctttgtataaataaaattttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_150563930_150564217
seq2: B6Ng01-152J23.b_39_326 (reverse)

seq1  ACCCCAAATCATCCCTTCCTCTCCTCCCAGTACTCCTTCATGTAAGTCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCAAATCATCCCTTCCTCTCCTCCCAGTACTCCTTCATGTAAGTCCT  50

seq1  ACCCCCATCCCCCTTAGAAGGGGAAGCCTTCCTCTGGGTATCAAACCTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCATCCCCCTTAGAAGGGGAAGCCTTCCTCTGGGTATCAAACCTCC  100

seq1  ATGCCCCTCTCCTTGCCAGTTGTTTATATTTTATTTTCAGTTTGTAACCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCCCTCTCCTTGCCAGTTGTTTATATTTTATTTTCAGTTTGTAACCT  150

seq1  TTTGCTAACATTGTTCAGACCATATTCTGATCACAAGAAATAGTCAGGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTAACATTGTTCAGACCATATTCTGATCACAAGAAATAGTCAGGAT  200

seq1  AATCTCCTCTTGTTTATACTTGATCACATATTTAAAGTCACTTTTGACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCCTCTTGTTTATACTTGATCACATATTTAAAGTCACTTTTGACAA  250

seq1  GAATGTAGAGAGGAAAGAATGTAAAGAACCACGAATTC  288
      ||||||||||||||||||||||||||||||||||||||
seq2  GAATGTAGAGAGGAAAGAATGTAAAGAACCACGAATTC  288

seq1: chr1_150510155_150511302
seq2: B6Ng01-152J23.g_68_1216

seq1  GAATTCTACCTCTTGAAAATCCTTAATATAGTTTAAAGGTATGGCTTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACCTCTTGAAAATCCTTAATATAGTTTAAAGGTATGGCTTAAA  50

seq1  AATATGGTTTAAATGCAAAGTAAATTTTTCTGAATTTATTATGTAGAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGGTTTAAATGCAAAGTAAATTTTTCTGAATTTATTATGTAGAATA  100

seq1  CATAGTATAAGTTAATATTTAATTTTCATTAAGCACCTGAGAGATTATTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTATAAGTTAATATTTAATTTTCATTAAGCACCTGAGAGATTATTA  150

seq1  GAAAATCCTATGAACATTTGGAAAAATGTTCCAAAACAGGAGAGAGACTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATCCTATGAACATTTGGAAAAATGTTCCAAAACAGGAGAGAGACTA  200

seq1  CAGTAAAAACATCATTTTCCAAGGGCACCATATCTATTGGTCCATCTGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAAAACATCATTTTCCAAGGGCACCATATCTATTGGTCCATCTGTC  250

seq1  TACATACTGGTCTGTCACTCTGAAAAATAATCTAGTAAGTACTTTCTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATACTGGTCTGTCACTCTGAAAAATAATCTAGTAAGTACTTTCTTAT  300

seq1  TTGTGGAAAGAATTTAATATATAACTAGAGGAGCTGATAAAATAGAAGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGAAAGAATTTAATATATAACTAGAGGAGCTGATAAAATAGAAGTA  350

seq1  TTGATTTTCAAAAAGTGAAGCATTTCTAGAAATGTTTTAGACTGGTAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTTCAAAAAGTGAAGCATTTCTAGAAATGTTTTAGACTGGTAACA  400

seq1  AGTCTAAATCAATGATCAAGACCTTAAATATATTTCAGAAATATTAGTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTAAATCAATGATCAAGACCTTAAATATATTTCAGAAATATTAGTAC  450

seq1  ATTAATAATTAAGCAAAAAGAAAATTTAAATTGTATATTTAGAGAACATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATAATTAAGCAAAAAGAAAATTTAAATTGTATATTTAGAGAACATA  500

seq1  AAAATACTATTTTGTCTTCATTTTCTCATCTCAGGGTTTTCCTAGGAGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATACTATTTTGTCTTCATTTTCTCATCTCAGGGTTTTCCTAGGAGAT  550

seq1  TCACAGCAAATATAAAAGTATAATTAAAATTTGTTTCTTTAAATATTATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGCAAATATAAAAGTATAATTAAAATTTGTTTCTTTAAATATTATG  600

seq1  TTTCTTTGTATTCTTTTGACATGTCTAGGGTTTAAGCAAATATGTATATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTGTATTCTTTTGACATGTCTAGGGTTTAAGCAAATATGTATATT  650

seq1  TACATGCAAAATTATGTTGTCACATAAATTTTGGAAAGCATTGTACTGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGCAAAATTATGTTGTCACATAAATTTTGGAAAGCATTGTACTGAG  700

seq1  AACTCAAATATGATACAGGAAAATCTCAGTAGATGAACTAGGTTTTATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAAATATGATACAGGAAAATCTCAGTAGATGAACTAGGTTTTATAT  750

seq1  CAACCCATAGTCTTTGCTATATATTACTTAATCTAATTTATTAAATGTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCCATAGTCTTTGCTATATATTACTTAATCTAATTTATTAAATGTGA  800

seq1  TAAATCCTATGTCAAGTCTGCAGGTTTTTTTAATAATAAACAGTAAAACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCCTATGTCAAGTCTGCAGGTTTTTTTAATAATAAACAGTAAAACA  850

seq1  CACATTGGTCAGTGATTTCTTAGTAGTATATAGTGTGTTATAAGCATCAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTGGTCAGTGATTTCTTAGTAGTATATAGTGTGTTATAAGCATCAG  900

seq1  AAAATTTTGAGAGCAAATAGAAAACCTACTGATATTGTTTATTCTACCTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTTGAGAGCAAATAGAAAACCTACTGATATTGTTTATTCTACCTT  950

seq1  AAATACTTTAAAGGAATTAATTTAAGATTATTTTAAATAAA--TAAAAAG  998
      |||||||||||||||||||||||||||||||||||||||||   ||||||
seq2  AAATACTTTAAAGGAATTAATTTAAGATTATTTTAAATAAAATAAAAAAG  1000

seq1  TGTTATATAG-AGATTTTATAAAATGTAG-TATTTTTAGCATGCATAATT  1046
      ||||||| || | |||||||||||||||| | ||||||||||||||||||
seq2  TGTTATAAAGAAAATTTTATAAAATGTAGTTTTTTTTAGCATGCATAATT  1050

seq1  TGAACTTTTAGTGGAAAATGACATTTACATTAGAATTGTTTGCTTGTGGA  1096
      |||||||||||| | ||||||||||||||||||||||| |||| ||| | 
seq2  TGAACTTTTAGTTGGAAATGACATTTACATTAGAATTG-TTGCCTGTTGG  1099

seq1  TTTACTATACATAATTAAATACCAAAGATCATTGTATAAAATAAATATTT  1146
       ||||||||||||||||||  |||| |||| |||||| ||||||| ||||
seq2  ATTACTATACATAATTAAAATCCAAGGATCTTTGTAT-AAATAAA-ATTT  1147

seq1  TT  1148
      ||
seq2  TT  1149