BAC Information

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BAC

Clone NameB6Ng01-152N01
Chromosome1 (Build37)
Map Location 143,475,061 - 143,476,146
singlet/doubletsinglet
Overlap genenone
Upstream geneKcnt2, EG226472
Downstream geneLOC639376
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152N01.bB6Ng01-152N01.g
ACCDH948297DH948298
length1,0691,106
definitionDH948297|Mus musculus domesticus DNA, BAC clone: B6Ng01-152N01, 5' end.DH948298|Mus musculus domesticus DNA, BAC clone: B6Ng01-152N01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgatatttccaagacttttacaaaggggtgttgaattgttttt
ctcctgagagcctctgctagagcctgacaaatacagaggtggatgctcac
agccaaccaatagaatgacatcagaaacaattttaattataatatgaaat
acagaattttactacctagctgcagggtggtaggcactgtcaaattatgt
tccgtgggatgtagaacacatatctaaacagtcaattataggtgcttttt
tctacaatgtactgaagctttgcctaggctcacaaagtaatgaaaagctg
gacgaaaacctgtcatcttgctttgtatttattttgtatttgtctgcttt
actttgggttacttacttgtctttttaagtcagcgtggcaatggcaaaaa
tataatctatatatccttgcatatccatcatacaggtttaaggcacaaag
actagtatttgttgtacacctgtagtcatattggattccaaaaaaagcaa
agtctcgtaggtttcacaatcctcccaaatcaggatatttactcttgatt
gtaagatcacaaactgaagcaaaaaaaaaaatctttaagaaagcactatg
aaaatcagtctggtagttcctcagaaaattagacatagtattacctgaag
acccaggtctaccactcctgggcatataccccaaagatgttccaacatat
aacaagaacacatgctccactatattaatagcagccttatttatagtagc
cagaacctggaaaaaaaacccagatgtccctcaacagaggaatggataca
gaaaatgtggtacatttacacaatggagtactactaagattctaaaacaa
tgaatttatgaaattaggcaaatggatggaactagaaaacatcctgtgtg
aggtaaaccagtcacaaagggacacacatagtatgcactcactgataagt
ggatattagccctaaagaaagacataatatcatcaaccagagctctctgg
gtctcatatcaccaggagtgaccatagaggaccattgtacagcgcatatg
tagcaagatggcttgttga
gaattcagtctttataaaagatctgaccgtgttgattttatgcctcagat
tgcttttcatgtaggactacaaaagcttttgtgcgtttgcaccagaaaag
ccatcaagttctcagaggttagcaggccgttctacggaaggctggacgat
aatgctgggtgaaatgcagataatgaaggcctggctcatgaaatttaaag
tgaagtttaggtcagttcaaatattcttatcagggctctttgtgtgatac
atttggattccgaatctgtggaatggaaaacctcgttttagtgggacaat
atatattggtcatctgaggctgaaaaatcagttgtggttaatatgagaag
aacagcaccatggagatgaaatcttctgagacccagacgctgtggtccat
ggaaggcaaaggctgcatcccagacttggtaacgtggagccttacacatc
atcctggttttaaaagcttgaaggggttatggagagaatatgagattggc
actgtatggcaggactcaggtctccccgaggagaggctttgtgaagatgc
agcctcagtctgcagtggaggccccagcatattggagaccgtggtgtaca
gcctataagaaaagctgtgtgtgctagttagtggtggcaaagctacagag
gcggggttgccgaagacctctgcagccctgaagatcatgagtgaattctg
ggtgatgggcattgagtgatttataccattgggagttggcttttacttta
atctgtttgttaccatgtcctggttccttcctccctcttagaataaggaa
ccgtatgttacagtcaatagactttgaatttttgaaagaaactgtagaga
ctttgaagtgttgaaagtttaaagtactgtggcatttttaaagttaagct
atgttttatattgtgatatttcatgagattttgggataaataagaaagaa
gggtatggttggacattgatatgtttgtgttaatctttctaagctgataa
gggtgaactgtgatgattaccggctagggcatgggcatgtctggggtagc
atttctgattatattatatgggcacgagcacctatatggcatggtccctg
ggcagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_143475061_143476146
seq2: B6Ng01-152N01.b_44_1112

seq1  GAATTCCTGATATTTCCAAGACTTTTACAAAGGGGTGTTGAATTGTTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGATATTTCCAAGACTTTTACAAAGGGGTGTTGAATTGTTTTT  50

seq1  CTCCTGAGAGCCTCTGCTAGAGCCTGACAAATACAGAGGTGGATGCTCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGAGAGCCTCTGCTAGAGCCTGACAAATACAGAGGTGGATGCTCAC  100

seq1  AGCCAACCAATAGAATGACATCAGAAACAATTTTAATTATAATATGAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAACCAATAGAATGACATCAGAAACAATTTTAATTATAATATGAAAT  150

seq1  ACAGAATTTTACTACCTAGCTGCAGGGTGGTAGGCACTGTCAAATTATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAATTTTACTACCTAGCTGCAGGGTGGTAGGCACTGTCAAATTATGT  200

seq1  TCCGTGGGATGTAGAACACATATCTAAACAGTCAATTATAGGTGCTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGTGGGATGTAGAACACATATCTAAACAGTCAATTATAGGTGCTTTTT  250

seq1  TCTACAATGTACTGAAGCTTTGCCTAGGCTCACAAAGTAATGAAAAGCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACAATGTACTGAAGCTTTGCCTAGGCTCACAAAGTAATGAAAAGCTG  300

seq1  GACGAAAACCTGTCATCTTGCTTTGTATTTATTTTGTATTTGTCTGCTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGAAAACCTGTCATCTTGCTTTGTATTTATTTTGTATTTGTCTGCTTT  350

seq1  ACTTTGGGTTACTTACTTGTCTTTTTAAGTCAGCGTGGCAATGGCAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGGGTTACTTACTTGTCTTTTTAAGTCAGCGTGGCAATGGCAAAAA  400

seq1  TATAATCTATATATCCTTGCATATCCATCATACAGGTTTAAGGCACAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATCTATATATCCTTGCATATCCATCATACAGGTTTAAGGCACAAAG  450

seq1  ACTAGTATTTGTTGTACACCTGTAGTCATATTGGATTCCAAAAAAAGCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTATTTGTTGTACACCTGTAGTCATATTGGATTCCAAAAAAAGCAA  500

seq1  AGTCTCGTAGGTTTCACAATCCTCCCAAATCAGGATATTTACTCTTGATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCGTAGGTTTCACAATCCTCCCAAATCAGGATATTTACTCTTGATT  550

seq1  GTAAGATCACAAACTGAAGCAAAAAAAAAAATCTTTAAGAAAGCACTATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGATCACAAACTGAAGCAAAAAAAAAAATCTTTAAGAAAGCACTATG  600

seq1  AAAATCAGTCTGGTAGTTCCTCAGAAAATTAGACATAGTATTACCTGAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCAGTCTGGTAGTTCCTCAGAAAATTAGACATAGTATTACCTGAAG  650

seq1  ACCCAGGTCTACCACTCCTGGGCATATACCCCAAAGATGTTCCAACATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGGTCTACCACTCCTGGGCATATACCCCAAAGATGTTCCAACATAT  700

seq1  AACAAGAACACATGCTCCACTATATTAATAGCAGCCTTATTTATAGTAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGAACACATGCTCCACTATATTAATAGCAGCCTTATTTATAGTAGC  750

seq1  CAGAACCTGGAAAAAAAACCCAGATGTCCCTCAACAGAGGAATGGATACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACCTGGAAAAAAAACCCAGATGTCCCTCAACAGAGGAATGGATACA  800

seq1  GAAAATGTGGTACATTTACACAATGGAGTACTACTAAGATTCTAAAAACA  850
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GAAAATGTGGTACATTTACACAATGGAGTACTACTAAGATTCT-AAAACA  849

seq1  ATGAATTTATGAAATTAGGCAAAATGGATGGAACTAGAAAACATCCTGTG  900
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  ATGAATTTATGAAATTAGGC-AAATGGATGGAACTAGAAAACATCCTGTG  898

seq1  TGAGGTAAACCAGTCACAAAGGGACACACATAGTATGCACTCACTGATAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTAAACCAGTCACAAAGGGACACACATAGTATGCACTCACTGATAA  948

seq1  GTGGATATTAGCCCTAAAGAAAGAACAATAATATCAACCAACCAGAGCTC  1000
      ||||||||||||||||||||||||   |||||||| | ||||||||||||
seq2  GTGGATATTAGCCCTAAAGAAAGA--CATAATATC-ATCAACCAGAGCTC  995

seq1  TCTGGGTCTCAATATCAACCAAGGAGGTGACCCATAGAAGGACCCATTGT  1050
      |||||||||| ||||||  | |||| |||| |||||| |||| |||||| 
seq2  TCTGGGTCTC-ATATCA--CCAGGA-GTGA-CCATAG-AGGA-CCATTG-  1037

seq1  TACAGCCGCATATGTAGCAAAGGATGGCTTTGTTGA  1086
      ||||| ||||||||||||||  |||||| |||||||
seq2  TACAG-CGCATATGTAGCAA--GATGGC-TTGTTGA  1069