BAC Information

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BAC

Clone NameB6Ng01-153B05
Chromosome1 (Build37)
Map Location 49,080,874 - 49,081,650
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC546734, LOC674566, LOC100041936, LOC666903, LOC666909
Downstream gene2900045O20Rik, LOC666924, C230029F24Rik, LOC627430, LOC100041981
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-153B05.bB6Ng01-153B05.g
ACCDH948487DH948488
length1,200777
definitionDH948487|Mus musculus domesticus DNA, BAC clone: B6Ng01-153B05, 5' end.DH948488|Mus musculus domesticus DNA, BAC clone: B6Ng01-153B05, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctgtttagttctgcaccccaattttaattgactttttggtaat
ctggagtataactttttgagttctttgtatatgttggatattagccctct
gtcagatgtaggattggtaaagatatttccccaatctgttggtggctatt
ttgtcctattggcagtgtcctttgccttaaagaagcttttcaattttatt
aggtcccatttgtcaattcttgatcttacagcaaaagccattgatgtttt
tcaggaaattttccctgtgtccatgtgctcaacgctctttcccactgtct
cttctattagattcagtatatctggttttatatggtgtttcttgatccac
ttggacttgaattttgtacaaggagataggaatggatcaaatggcattct
tctaaatgctgatctctagtggaaccagcatgatttgttgaaaatgctct
tttttcactggatggttttggctactttgtcaaagatcaggtgatcatag
acatgtgggtttaattctggatcttcaattctattccactgatctatttg
actgtctctgtatcaataccatgtagttttttatcacttttactgtatag
tacagcttgagaacatgaatggcgtctcccacagatgtcctttttattgt
tgcaaatagtttttgctaccctatttttttttgtttgttatttcaaatga
atttgagaattgctctttctaactctatgaaaaattaagttggaattttg
atggagattgcatttaatctgaggattgctttttggttagatggctaatt
ctactatatttatcctgctgatccatgagcatgtgaggtctttccatctt
ctgagattctctttaatttctttctttagggattttcagtttttttgtca
tacagatctttcacttgcttggttatagtaacaccacgatatgttatact
atttttgactattttgaatgtgttgttcccagtccacttatcttttgagt
agaggaaggctgctgatttgatagttattttataatccaggcactttact
gacttggttatcagctggtggatctctctgtataaattttgtaatcctta
tagttaccatacatcacctggcatagggtacttaatttctcccctcccaa
atagtgacaccttggattttttatctgtgctaatgggctctacccgtgaa

gaattcatgaaattcttaggcaaatgtacggaagtagaaaatattatcct
gagtgagataacccaatcacaaaagaacagaaatggtatgcattcattga
taaatggatatgagtccaatagctccaaatacccaaaataaattcacaca
tgacatgaagctcaagaagaaggaagaccaacatgtgggcgcttaagtcc
ttattggaaaggggaacaccctcataaaagtagggggagggtggatggaa
tagggctttccaggaggtgtgggaaactgggaatagggataacatatgaa
atgtaagtaaagaaaatattcaataaaaaattaacacataaatgtgtgtg
ttttcttttacaaacattcgctaatgtttttgtatttagaaaatgagtta
aatcttggatttcatacatctgtttcaaaatagttttataaacacatcaa
atactgaaactgagtttcatgaaatatagttttttatgatttacctcaga
tccatatgccagcctcttctttctgcccaaaatatggacattattgattt
aatgtttaagttaataaactaaaaattaacatattgcatatgttaatgga
gctgtatattatacaagaagttgtgttatattttatgtctcctcactcag
caaagatgccaactcttcatttctccaatattcagttgctgaggggaaga
ccctgagactacttaagtttcttgtgtagatgcccattgagttaaaactc
tttgcatcaagagtcacattttattgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_49080874_49081650
seq2: B6Ng01-153B05.g_71_847 (reverse)

seq1  GCAATAAAATGTGACTCTTGATTGCAAAGAGTTTTAACTCATTGGGCATC  50
      ||||||||||||||||||||| ||||||||||||||||||| ||||||||
seq2  GCAATAAAATGTGACTCTTGA-TGCAAAGAGTTTTAACTCAATGGGCATC  49

seq1  TACACTTGTAACTTAAGTAGTCTCAGGGTCTTCCCCTCAGCAACTGAATA  100
      |||||  | |||||||||||||||||||||||||||||||||||||||||
seq2  TACACAAGAAACTTAAGTAGTCTCAGGGTCTTCCCCTCAGCAACTGAATA  99

seq1  TTGGAGAAATGAAGAGTTGGCATCTTTGCTGAGTGAGGAGACAT-AAATA  149
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TTGGAGAAATGAAGAGTTGGCATCTTTGCTGAGTGAGGAGACATAAAATA  149

seq1  TAACACAACTTCTTGTATAATATACAGCTCCATTAACATATGCAATATGT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACAACTTCTTGTATAATATACAGCTCCATTAACATATGCAATATGT  199

seq1  TAATTTTTAGTTTATTAACTTAAACATTAAATCAATAATGTCCATATTTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTTAGTTTATTAACTTAAACATTAAATCAATAATGTCCATATTTT  249

seq1  GGGCAGAAAGAAGAGGCTGGCATATGGATCTGAGGTAAATCATAAAAAAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGAAAGAAGAGGCTGGCATATGGATCTGAGGTAAATCATAAAAAAC  299

seq1  TATATTTCATGAAACTCAGTTTCAGTATTTGATGTGTTTATAAAACTATT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTCATGAAACTCAGTTTCAGTATTTGATGTGTTTATAAAACTATT  349

seq1  TTGAAACAGATGTATGAAATCCAAGATTTAACTCATTTTCTAAATACAAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAACAGATGTATGAAATCCAAGATTTAACTCATTTTCTAAATACAAA  399

seq1  AACATTAGCGAATGTTTGTAAAAGAAAACACACACATTTATGTGTTAATT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTAGCGAATGTTTGTAAAAGAAAACACACACATTTATGTGTTAATT  449

seq1  TTTTATTGAATATTTTCTTTACTTACATTTCATATGTTATCCCTATTCCC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTGAATATTTTCTTTACTTACATTTCATATGTTATCCCTATTCCC  499

seq1  AGTTTCCCACACCTCCTGGAAAGCCCTATTCCATCCACCCTCCCCCTACT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCCCACACCTCCTGGAAAGCCCTATTCCATCCACCCTCCCCCTACT  549

seq1  TTTATGAGGGTGTTCCCCTTTCCAATAAGGACTTAAGCGCCCACATGTTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGAGGGTGTTCCCCTTTCCAATAAGGACTTAAGCGCCCACATGTTG  599

seq1  GTCTTCCTTCTTCTTGAGCTTCATGTCATGTGTGAATTTATTTTGGGTAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCCTTCTTCTTGAGCTTCATGTCATGTGTGAATTTATTTTGGGTAT  649

seq1  TTGGAGCTATTGGACTCATATCCATTTATCAATGAATGCATACCATTTCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGCTATTGGACTCATATCCATTTATCAATGAATGCATACCATTTCT  699

seq1  GTTCTTTTGTGATTGGGTTATCTCACTCAGGATAATATTTTCTACTTCCG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTTTGTGATTGGGTTATCTCACTCAGGATAATATTTTCTACTTCCG  749

seq1  TACATTTGCCTAAGAATTTCATGAATTC  777
      ||||||||||||||||||||||||||||
seq2  TACATTTGCCTAAGAATTTCATGAATTC  777