BAC Information

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BAC

Clone NameB6Ng01-153J04
Chromosome1 (Build37)
Map Location 114,250,149 - 114,403,817
singlet/doubletdoublet
Overlap genenone
Upstream geneEG666578, Dsel, LOC547247, EG626897, LOC666615
Downstream geneLOC666635
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-153J04.bB6Ng01-153J04.g
ACCDH948847DH948848
length760480
definitionDH948847|Mus musculus domesticus DNA, BAC clone: B6Ng01-153J04, 5' end.DH948848|Mus musculus domesticus DNA, BAC clone: B6Ng01-153J04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(114,250,149 - 114,250,905)(114,403,332 - 114,403,817)
sequence
gaattcattgccactatgcctcaagatctccatgccaagatccaggtcag
aaacatgtatctctcagtctccagattaggatcacaggtgggttttccaa
ttctggactgtagttcattccagatatagtcaagttgacaaccaggaata
gccactacaccttccaatcttgaatggaactcattctatagcccaggctt
gtgcctacttaccatgctccggcttgtgattaggagtgtaaggttatttt
ttatttttttccttccaccattcttgtccagagcacaatgctgttagaat
gctgcataaattccacacatgccagtgggagtatattattgtagctcttt
ggaggatgagttgggagacgtctaggtcaatctaatttatatagggtgtt
tccagcaaatccaggttagaggaaatcaagtaaaataggattttaaatgt
tttcattgaaattgtcctgtaggggacttgttcccactacacaaatgttc
tacaattcagtcataattccttcagaaaactccctttgccatctcccctc
cccctgctcaccaacctacacactcctgcttccttgtcctggcatcctcc
tatactggggcattgagtcataatttccaggttatttaaattatttgttt
aatttcatgtagagatgaggtaggtctcttttgtacagacaagtctagcc
tggaatgtggtattttgtgcacagcacattaaattatagtttccagtgtt
ggttgttaaa
tgatggaggttgcattgaatctgtaaattgtttttgttaagctagccaat
ttttactgtcagtcctgaagataaataagcataggagatatttccatttt
ctgaggtagtctttgatttctttcttcagagccttgaactacttgtcata
cagatctttcacttgcttggttagagtttccccaagatattctttattat
ttgtgactattgtgaagggtattgtttccctaatttcttcctcagcctgt
taatcatttgtttagaggaaggaaggctgacaatttgtttgaattaattt
ttgtttgtttgtttatttagggcaccagggacggtgaaagggagtgaagg
cagagaaaggaaggggacacagaaggacggagagagagagaagaggagag
agaaagaagggaagaggcagggccaggaacaagtggaggtgggggataac
acatggagggggagagagaggggtaggaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_114250149_114250905
seq2: B6Ng01-153J04.b_46_805

seq1  GAATTCATTGCCACTATGCCTCAAGATCTCCATGCCAAGATCCAGGTCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGCCACTATGCCTCAAGATCTCCATGCCAAGATCCAGGTCAG  50

seq1  AAACATGTATCTCTCAGTCTCCAGATTAGGATCACAGGTGGGTTTTCCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATGTATCTCTCAGTCTCCAGATTAGGATCACAGGTGGGTTTTCCAA  100

seq1  TTCTGGACTGTAGTTCATTCCAGATATAGTCAAGTTGACAACCAGGAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGACTGTAGTTCATTCCAGATATAGTCAAGTTGACAACCAGGAATA  150

seq1  GCCACTACACCTTCCAATCTTGAATGGAACTCATTCTATAGCCCAGGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACTACACCTTCCAATCTTGAATGGAACTCATTCTATAGCCCAGGCTT  200

seq1  GTGCCTACTTACCATGCTCCGGCTTGTGATTAGGAGTGTAAGGTTATTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTACTTACCATGCTCCGGCTTGTGATTAGGAGTGTAAGGTTATTTT  250

seq1  TTATTTTTTTCCTTCCACCATTCTTGTCCAGAGCACAATGCTGTTAGAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTTTCCTTCCACCATTCTTGTCCAGAGCACAATGCTGTTAGAAT  300

seq1  GCTGCATAAATTCCACACATGCCAGTGGGAGTATATTATTGTAGCTCTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCATAAATTCCACACATGCCAGTGGGAGTATATTATTGTAGCTCTTT  350

seq1  GGAGGATGAGTTGGGAGACGTCTAGGTCAATCTAATTTATATAGGGTGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGATGAGTTGGGAGACGTCTAGGTCAATCTAATTTATATAGGGTGTT  400

seq1  TCCAGCAAATCCAGGTTAGAGGAAATCAAGTAAAATAGGATTTTAAATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCAAATCCAGGTTAGAGGAAATCAAGTAAAATAGGATTTTAAATGT  450

seq1  TTTCATTGAAATTGTCCTGTAGGGGACTTGTTCCCACTACACAAATGTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATTGAAATTGTCCTGTAGGGGACTTGTTCCCACTACACAAATGTTC  500

seq1  TACAATTCAGTCATAATTCCTTCAGAAAACTCCCTTTGCCATCTCCCCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATTCAGTCATAATTCCTTCAGAAAACTCCCTTTGCCATCTCCCCTC  550

seq1  CCCCTGCTCACCAACCTACACACTCCTGCTTCCTTGTCCTGGCATCCTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGCTCACCAACCTACACACTCCTGCTTCCTTGTCCTGGCATCCTCC  600

seq1  TATACTGGGGCATTGAGTCATAA-TTCCAGGTTATTTAAATTATTTGTTT  649
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TATACTGGGGCATTGAGTCATAATTTCCAGGTTATTTAAATTATTTGTTT  650

seq1  AATTTCATGTAGAGATGAGGTAGGTCTC-TTTGTACAGACAAGTCTAGCC  698
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  AATTTCATGTAGAGATGAGGTAGGTCTCTTTTGTACAGACAAGTCTAGCC  700

seq1  TGGAATGTGGTATTTTGTGCACAGCACATT-AATTATAGTTTCCAGGTGT  747
      |||||||||||||||||||||||||||||| |||||||||||||||   |
seq2  TGGAATGTGGTATTTTGTGCACAGCACATTAAATTATAGTTTCCAGTGTT  750

seq1  GGCTGTTAAA  757
      || |||||||
seq2  GGTTGTTAAA  760

seq1: chr1_114403332_114403817
seq2: B6Ng01-153J04.g_70_555 (reverse)

seq1  TCTCCTACCCCTCTCTCTCCCCCTCCATGTGTTATCCCCCACCTCCACTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTACCCCTCTCTCTCCCCCTCCATGTGTTATCCCCCACCTCCACTT  50

seq1  GTTCCTGGCCCTGCCTCTTCCCTTCTTTCTCTCTCCTCTTCTCTCTCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTGGCCCTGCCTCTTCCCTTCTTTCTCTCTCCTCTTCTCTCTCTCT  100

seq1  CCGTCCTTCTGTGTCCCCTTCCTTTCTCTGCCTTCACTCCCTTTCACCGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTCCTTCTGTGTCCCCTTCCTTTCTCTGCCTTCACTCCCTTTCACCGT  150

seq1  CCCTGGTGCCCTAAATAAACAAACAAACAAAAATTAATTCAAACAAATTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGTGCCCTAAATAAACAAACAAACAAAAATTAATTCAAACAAATTG  200

seq1  TCAGCCTTCCTTCCTCTAAACAAATGATTAACAGGCTGAGGAAGAAATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCTTCCTTCCTCTAAACAAATGATTAACAGGCTGAGGAAGAAATTA  250

seq1  GGGAAACAATACCCTTCACAATAGTCACAAATAATAAAGAATATCTTGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAACAATACCCTTCACAATAGTCACAAATAATAAAGAATATCTTGGG  300

seq1  GAAACTCTAACCAAGCAAGTGAAAGATCTGTATGACAAGTAGTTCAAGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTCTAACCAAGCAAGTGAAAGATCTGTATGACAAGTAGTTCAAGGC  350

seq1  TCTGAAGAAAGAAATCAAAGACTACCTCAGAAAATGGAAATATCTCCTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAGAAAGAAATCAAAGACTACCTCAGAAAATGGAAATATCTCCTAT  400

seq1  GCTTATTTATCTTCAGGACTGACAGTAAAAATTGGCTAGCTTAACAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTATTTATCTTCAGGACTGACAGTAAAAATTGGCTAGCTTAACAAAAA  450

seq1  CAATTTACAGATTCAATGCAACCTCCATCAGAATTC  486
      ||||||||||||||||||||||||||||||||||||
seq2  CAATTTACAGATTCAATGCAACCTCCATCAGAATTC  486