BAC Information

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BAC

Clone NameB6Ng01-154G11
Chromosome1 (Build37)
Map Location 83,802,986 - 83,804,068
singlet/doubletsinglet
Overlap genenone
Upstream geneHrb, A030005L19Rik, A030014E15Rik, EG621362, A030003K21Rik, LOC665225, LOC100039524, EG665236, LOC665246, Slc19a3, LOC665196, LOC621495, A030005K14Rik, 5530401N06Rik, EG665272, Ccl20, LOC100039575, 4930563E19Rik, EG621614, 4930544G21Rik, EG622958
Downstream gene5033414K04Rik, LOC100039638, Dner, Trip12
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-154G11.bB6Ng01-154G11.g
ACCDH949456DH949457
length1,0841,169
definitionDH949456|Mus musculus domesticus DNA, BAC clone: B6Ng01-154G11, 5' end.DH949457|Mus musculus domesticus DNA, BAC clone: B6Ng01-154G11, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttagtcaaaatgtccatgtctttctttgactattagtcatttaa
gatcaggagctgatcctcagccattgtggcagctattgttgtttgaaata
gccaagggcagcaaaatggctcatcaggtaaaggtactggcttctaatcc
tgataatcagagtttgaccccacgggactcatacagtgaatgtgagaacc
aatcctcacaaacagccccatgattcccacattcttgtcatgatatgcaa
tcatatgcacacaatagataaatacataaaatataataaaaacaaatgat
ggagaaattttttttgtaaactgttagaagcattaaagctgtaacttaaa
gtgggcaatatggaagccagcgaaaggctggctgtttacacatttctgac
tgcacacctggcttctactctattaaaagtttctctgtatgtatgcatta
tcatgagagaaaaatataaaattcactttagaaattaaatccaaaggatg
agcagaaagaaaaggagagagcttggtgaggtggttttataacgttgtgc
taggaaacaagaccaagggagacatcagtagaagaaaaacagtcaagaaa
ggggacaccagaacaatagaacattttagtttcttgggacctgcagtcag
gaaatggggaatctaatagagttccacactgaagtttcctcttcactgcc
actcacttctttatccatgcgacctgtgtttatggaattcagagtatgtg
cagtgcatctctggggaacaagaactgcaaaatctcagcttcaacggagt
agcccttctgttgcaaaatacagttaacagacaagggagtatataagcaa
tgataccagccgtgatgagagtgataagtgctgtggtcagagggtaaccc
atcgtgtttggacagaatgctccatttgatcacagagaagtagaagcaga
catcagatatagccccagatccttttccttgaatcaatgccctgagtgtc
agtggaacttgcatgcatgcctagtgagccctgatttacttagtggaccc
ttaaaagggaaaacgggaaagaatagagaatcct
gaattctcacctgaggaatacggaatgatagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaaggtgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaagaatggatacaaaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggggggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaactcaaga
agaatgaagactgaagtgtggacactatgcccctccttagatttgggaac
aaaacacccatggaaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaaggctgacaccattgcatacactagcaagatttatcgaaag
gacccagatgtagctgtctcttgtgagactatgccggggcctagcaacac
agaagtggatgctcacagtcagctaatggatggatcacagggctcccaat
ggaggagctagagaagtagccaaggagctaaaggattctgcaaccctata
aggtgaacaacattatgaacaacagtaccgactccttgaccttagctgca
tattatcaaagatggccatatcgccctcctggaaagaagtcaatggactt
gcaaactttattgccgtacaggaacatcagggcaaaagtgggatgtggtt
ggacgtggagtggggtggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_83802986_83804068
seq2: B6Ng01-154G11.b_43_1126 (reverse)

seq1  AGGA-TCTCTATTC-TTCCCGTTTTCCCTTTTAAAGGGTTCACTAAGCTA  48
      |||| ||||||||| ||||||||||||||||| |||||| ||||||| ||
seq2  AGGATTCTCTATTCTTTCCCGTTTTCCCTTTT-AAGGGTCCACTAAG-TA  48

seq1  ATTCA-GACTCACTA-GCATGCATGCAAGTTCCACTGACACTCAGGGCAT  96
      | ||| | ||||||| ||||||||||||||||||||||||||||||||||
seq2  AATCAGGGCTCACTAGGCATGCATGCAAGTTCCACTGACACTCAGGGCAT  98

seq1  GTATTCAAGGAAAGGAATCTTGGGGCTATATCTGATGTCTGCCTTCTACT  146
        ||||||||||| | ||| ||||||||||||||||||||| ||||||||
seq2  TGATTCAAGGAAAAGGATC-TGGGGCTATATCTGATGTCTG-CTTCTACT  146

seq1  TCTCTGTGATCAAATTGAAGCATTCTGTCCAAACACGATGGGTTACCCTC  196
      |||||||||||||| || ||||||||||||||||||||||||||||||||
seq2  TCTCTGTGATCAAA-TGGAGCATTCTGTCCAAACACGATGGGTTACCCTC  195

seq1  TGACCACAGCACTTATCACTCTCATCAC-GCTGGTATCATTGCTTATATA  245
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TGACCACAGCACTTATCACTCTCATCACGGCTGGTATCATTGCTTATATA  245

seq1  CTCCCTTGTCTGTTAACTGTATTTTGCAACAGAAGGGCTACTCCGTTGAA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTTGTCTGTTAACTGTATTTTGCAACAGAAGGGCTACTCCGTTGAA  295

seq1  GCTGAGATTTTGCAGTTCTTGTTCCCCAGAGATGCACTGCACATACTCTG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGATTTTGCAGTTCTTGTTCCCCAGAGATGCACTGCACATACTCTG  345

seq1  AATTCCATAAACACAGGTCGCATGGATAAAGAAGTGAGTGGCAGTGAAGA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCATAAACACAGGTCGCATGGATAAAGAAGTGAGTGGCAGTGAAGA  395

seq1  GGAAACTTCAGTGTGGAACTCTATTAGATTCCCCATTTCCTGACTGCAGG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACTTCAGTGTGGAACTCTATTAGATTCCCCATTTCCTGACTGCAGG  445

seq1  TCCCAAGAAACTAAAATGTTCTATTGTTCTGGTGTCCCCTTTCTTGACTG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAGAAACTAAAATGTTCTATTGTTCTGGTGTCCCCTTTCTTGACTG  495

seq1  TTTTTCTTCTACTGATGTCTCCCTTGGTCTTGTTTCCTAGCACAACGTTA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTTCTACTGATGTCTCCCTTGGTCTTGTTTCCTAGCACAACGTTA  545

seq1  TAAAACCACCTCACCAAGCTCTCTCCTTTTCTTTCTGCTCATCCTTTGGA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACCACCTCACCAAGCTCTCTCCTTTTCTTTCTGCTCATCCTTTGGA  595

seq1  TTTAATTTCTAAAGTGAATTTTATATTTTTCTCTCATGATAATGCATACA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTTCTAAAGTGAATTTTATATTTTTCTCTCATGATAATGCATACA  645

seq1  TACAGAGAAACTTTTAATAGAGTAGAAGCCAGGTGTGCAGTCAGAAATGT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAGAAACTTTTAATAGAGTAGAAGCCAGGTGTGCAGTCAGAAATGT  695

seq1  GTAAACAGCCAGCCTTTCGCTGGCTTCCATATTGCCCACTTTAAGTTACA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACAGCCAGCCTTTCGCTGGCTTCCATATTGCCCACTTTAAGTTACA  745

seq1  GCTTTAATGCTTCTAACAGTTTACAAAAAAAATTTCTCCATCATTTGTTT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTAATGCTTCTAACAGTTTACAAAAAAAATTTCTCCATCATTTGTTT  795

seq1  TTATTATATTTTATGTATTTATCTATTGTGTGCATATGATTGCATATCAT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATATTTTATGTATTTATCTATTGTGTGCATATGATTGCATATCAT  845

seq1  GACAAGAATGTGGGAATCATGGGGCTGTTTGTGAGGATTGGTTCTCACAT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGAATGTGGGAATCATGGGGCTGTTTGTGAGGATTGGTTCTCACAT  895

seq1  TCACTGTATGAGTCCCGTGGGGTCAAACTCTGATTATCAGGATTAGAAGC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGTATGAGTCCCGTGGGGTCAAACTCTGATTATCAGGATTAGAAGC  945

seq1  CAGTACCTTTACCTGATGAGCCATTTTGCTGCCCTTGGCTATTTCAAACA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTACCTTTACCTGATGAGCCATTTTGCTGCCCTTGGCTATTTCAAACA  995

seq1  ACAATAGCTGCCACAATGGCTGAGGATCAGCTCCTGATCTTAAATGACTA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATAGCTGCCACAATGGCTGAGGATCAGCTCCTGATCTTAAATGACTA  1045

seq1  ATAGTC-CAGAAAGACATGGACATTTTGACTAAGAATTC  1083
      ||||||  |||||||||||||||||||||||||||||||
seq2  ATAGTCAAAGAAAGACATGGACATTTTGACTAAGAATTC  1084