BAC Information

Click to search

BAC

Clone NameB6Ng01-155D15
Chromosome1 (Build37)
Map Location 52,860,811 - 52,924,955
singlet/doubletdoublet
Overlap geneInpp1, Hibch
Upstream geneMyo1b, EG667010, LOC667014, Stat4, LOC100042634, Stat1, Gls, LOC546735, Nab1, LOC546736, Gm553, LOC100042094, EG433305, 5330401P04Rik, 2210010L05Rik
Downstream gene1700019D03Rik, Gdf8, 1700019A02Rik, Pms1, LOC671024, Ormdl1, Osgepl1, Asnsd1, EG627858, EG627866, LOC100042162, Dnahc7, Stk17b, Hecw2
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155D15.bB6Ng01-155D15.g
ACCDH950068DH950069
length1,1371,070
definitionDH950068|Mus musculus domesticus DNA, BAC clone: B6Ng01-155D15, 5' end.DH950069|Mus musculus domesticus DNA, BAC clone: B6Ng01-155D15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(52,860,811 - 52,861,588)(52,923,879 - 52,924,955)
sequence
gaattcagtaagaatgttgcctattcagtaacattcataattgcctctag
tattgtaagagagatagtgaaagaaatcaggcattactatctactatata
gcgttagaaatctcagggcaagcttagcaaagtaagtttagaattcttat
tatagttatgtatggcagactacattacttattagtaaaatagccccccc
cccacacacacactatcacttagaataaaagccaagtcactcccatatac
aggaatttacaatggtttaggaagtagattgggctatggttttacagcat
tgcattcttcatgagaaggttagctagagtggagctccctaattagaacc
acgacttgagaaagtccttgcccccgggagtgtaaaggcctcacacctgg
cttctaagactatagctgaccttagatagagctgactttgtctcagttgt
tttattgcccagttcctgccagtctgtgtatgcattcctctgttttgtgt
tagagtcattaagcatccggtatcctcattgtaccttgccgatgtgtcac
ctaacttccctattttcttttgtataaaaagttttgatacttaatttgac
agtttacattcagattcagctctctcttgagtccgtgtctgtcaattctc
accgacccttgctcacctgcaaccagaaacccattctctacagatcggag
acccaatagaggttagtctgtggcaatctctggattactaacaaaatcta
gctcactgtaaataaataggtgtccaaccgtatttaggaaataatgacag
ggaagcagttgtgtgtgttcaacccatacatacattcgtcaaatgtttcc
cactcagggttgattgaagccaggggcagaagggtgggtaaaagcgctag
actacacagtcacagtctgaggtattggcatcaggacttcaatattccag
ttttagaggagcccaggcccattcttagcactctctgggagaggcacaca
cccaccctctgtcctttgctttctggccagatagtagtaaatgggatact
tttcttctcattgtgtggtcaggagtttatttctatgagctaaattcagt
gctgctattctattctagcagcagcctagagcagtcc
gaattctgggagagtgcccagcacaagagatttgcctggaattacatcat
gagatgagcatatggtacctgggcactggtaaccagccacatgacaaaat
gtagagtagaatatatgagttattttaagttatgatctaatcagagaaga
gtctagctatatggcaaggtatttgtaactgtattttgagtctgagtctt
atttctgggagtatgggactaagaggaagaacctgacctaacttctactg
gtgaagaccgagacagagctgtattctgacccatctggaaattcccaaag
tattcacagacaaagcacagctcagacttcacacaaacaaggtctatatg
cgaagttctttaaaagctacaaaagaaattattgattgtggtagagatat
agacactcaccccacatcaacatctacagacatgcatatttcatatataa
aacattaagcaataactaatgcaggacattaagccagagtctgctaaatt
ccttgttgactataatgccacaatgtatagaatttttaccttttgatttt
ctctatatatacctttcctctacatatacttttaatattttaccaaatac
tatctttatattacctaaatgttttctatttctttttatttcatgaaaat
atgagtacttattggccacatggaaccatttctattaaattataatttat
cagtgttggatattggttctaatgctttgattcaatcatgaatctgcgtg
tccaaacgctgaaggtacttgtccctaattgctttttgattgatcaataa
agaatccagtggccaatggctgggcagagagacggtgctggacccttaag
agttatggggactagcacagcagaaaggaggagatgagatcctccttaac
tgtgtgtagggcggggaagacggatcagatttagagctgcagagggaaga
tcatctaaatgtaggtaagaaggatgcagctcctgaaggctgctcagaag
tgtctaggcagcaagatgatcataaggaggtgagtcatgaggtaccagag
ggaatctataatagctgggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_52860811_52861588
seq2: B6Ng01-155D15.b_428_1183

seq1  GTAAAGGCCTCACACCTGGCTTCTAAGACTATAGCTGACCTTAGATAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGGCCTCACACCTGGCTTCTAAGACTATAGCTGACCTTAGATAGAG  50

seq1  CTGACTTTGTCTCAGTTGTTTTATTGCCCAGTTCCTGCCAGTCTGTGTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTTTGTCTCAGTTGTTTTATTGCCCAGTTCCTGCCAGTCTGTGTAT  100

seq1  GCATTCCTCTGTTTTGTGTTAGAGTCATTAAGCATCCGGTATCCTCATTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTCCTCTGTTTTGTGTTAGAGTCATTAAGCATCCGGTATCCTCATTG  150

seq1  TACCTTGCCGATGTGTCACCTAACTTCCCTATTTTCTTTTGTATAAAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTGCCGATGTGTCACCTAACTTCCCTATTTTCTTTTGTATAAAAAG  200

seq1  TTTTGATACTTAATTTGACAGTTTACATTCAGATTCAGCTCTCTCTTGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGATACTTAATTTGACAGTTTACATTCAGATTCAGCTCTCTCTTGAG  250

seq1  TCCGTGTCTGTCAATTCTCACCGACCCTTGCTCACCTGCAACCAGAAACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGTGTCTGTCAATTCTCACCGACCCTTGCTCACCTGCAACCAGAAACC  300

seq1  CATTCTCTACAGATCGGAGACCCAATAGAGGTTAGTCTGTGGCAATCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTCTACAGATCGGAGACCCAATAGAGGTTAGTCTGTGGCAATCTCT  350

seq1  GGATTACTAACAAAATCTAGCTCACTGTAAATAAATAGGTGTCCAACCGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTACTAACAAAATCTAGCTCACTGTAAATAAATAGGTGTCCAACCGT  400

seq1  ATTTAGGAAATAATGACAGGGAAGCAGTTGTGTGTGTTCAACCCATACAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGGAAATAATGACAGGGAAGCAGTTGTGTGTGTTCAACCCATACAT  450

seq1  ACATTCGTCAAATGTTTCCCACTCAGGGTTGATTGAAGCCAGGGGCAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCGTCAAATGTTTCCCACTCAGGGTTGATTGAAGCCAGGGGCAGAA  500

seq1  GGGTGGGTAAAAGCGCTAGACTACACAGTCACAGTCTGAGGTATTGGCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGGGTAAAAGCGCTAGACTACACAGTCACAGTCTGAGGTATTGGCAT  550

seq1  CAGGACTTCAATATTCCAGTTTTAGAGGAGCCCAGGCCCATTCTTAGCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CAGGACTTCAATATTCCAGTTTTAGAGGAGCCCAGGCCCATTCTTAGCA-  599

seq1  CTCTCCTGGGAGAGGCCAACACAACCCACCCCTCTGTCCTTTGCTTTCTG  650
      |||| |||||||||||  |||| ||||| |||||||||||||||||||||
seq2  CTCT-CTGGGAGAGGC--ACAC-ACCCA-CCCTCTGTCCTTTGCTTTCTG  644

seq1  GCCAGATAGTAGTAAAAATGGGATACCTTTTCTTCTTCATTTGTGTGGTC  700
      |||||||||||||  |||||||||| ||||||||| ||| ||||||||||
seq2  GCCAGATAGTAGT--AAATGGGATA-CTTTTCTTC-TCA-TTGTGTGGTC  689

seq1  AAGAAGTTTATTTCTATGAGCTAAAATTTCCAGTTGGCTGCTATTCTATT  750
       || |||||||||||||||||||||   | ||||  ||||||||||||||
seq2  -AGGAGTTTATTTCTATGAGCTAAA---TTCAGT--GCTGCTATTCTATT  733

seq1  CTAGCAGCCAGCCCCTAGAGGCCAGTCC  778
      ||||||| |||  |||||||  ||||||
seq2  CTAGCAG-CAG--CCTAGAG--CAGTCC  756

seq1: chr1_52923879_52924955
seq2: B6Ng01-155D15.g_66_1135 (reverse)

seq1  GCCCAGCTATTATAGATTTCCCTCTGGTA-CTCATGACTCACCTCCTTAT  49
      |||||||||||||||| |||||||||||| ||||||||||||||||||||
seq2  GCCCAGCTATTATAGA-TTCCCTCTGGTACCTCATGACTCACCTCCTTAT  49

seq1  GATCTATCTTTGCTGCCTAAGACACTTCTGAGCAGCCCTTCCAGGGGCTG  99
      |||| ||| ||||||||| ||||||||||||||||||  | |||| ||||
seq2  GATC-ATC-TTGCTGCCT-AGACACTTCTGAGCAGCC--TTCAGGAGCTG  94

seq1  CATTCCTTCTTACCTACATTTTAGATGATCTTCCCTCTGCAGCTCTAAAT  149
      || ||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CA-TCCTTCTTACCTACA-TTTAGATGATCTTCCCTCTGCAGCTCTAAAT  142

seq1  CTGATCCCGTCTTCCCCGCCCTACACACAGTTAAGGA-GATCTCATCTCC  198
      ||||| ||||||||||||||||||||||||||||||| ||||||||||||
seq2  CTGAT-CCGTCTTCCCCGCCCTACACACAGTTAAGGAGGATCTCATCTCC  191

seq1  TCCTTTCTGCTGTGCTAGTCCCCATAACTCTTAAGGGTCCAGCACCGTCT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCTGCTGTGCTAGTCCCCATAACTCTTAAGGGTCCAGCACCGTCT  241

seq1  CTCTGCCCAGCCATTGGCCACTGGATTCTTTATTGATCAATCAAAAAGCA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCCCAGCCATTGGCCACTGGATTCTTTATTGATCAATCAAAAAGCA  291

seq1  ATTAGGGACAAGTACCTTCAGCGTTTGGACACGCAGATTCATGATTGAAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGGGACAAGTACCTTCAGCGTTTGGACACGCAGATTCATGATTGAAT  341

seq1  CAAAGCATTAGAACCAATATCCAACACTGATAAATTATAATTTAATAGAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCATTAGAACCAATATCCAACACTGATAAATTATAATTTAATAGAA  391

seq1  ATGGTTCCATGTGGCCAATAAGTACTCATATTTTCATGAAATAAAAAGAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTCCATGTGGCCAATAAGTACTCATATTTTCATGAAATAAAAAGAA  441

seq1  ATAGAAAACATTTAGGTAATATAAAGATAGTATTTGGTAAAATATTAAAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAAACATTTAGGTAATATAAAGATAGTATTTGGTAAAATATTAAAA  491

seq1  GTATATGTAGAGGAAAGGTATATATAGAGAAAATCAAAAGGTAAAAATTC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATGTAGAGGAAAGGTATATATAGAGAAAATCAAAAGGTAAAAATTC  541

seq1  TATACATTGTGGCATTATAGTCAACAAGGAATTTAGCAGACTCTGGCTTA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACATTGTGGCATTATAGTCAACAAGGAATTTAGCAGACTCTGGCTTA  591

seq1  ATGTCCTGCATTAGTTATTGCTTAATGTTTTATATATGAAATATGCATGT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCTGCATTAGTTATTGCTTAATGTTTTATATATGAAATATGCATGT  641

seq1  CTGTAGATGTTGATGTGGGGTGAGTGTCTATATCTCTACCACAATCAATA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGATGTTGATGTGGGGTGAGTGTCTATATCTCTACCACAATCAATA  691

seq1  ATTTCTTTTGTAGCTTTTAAAGAACTTCGCATATAGACCTTGTTTGTGTG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTTTGTAGCTTTTAAAGAACTTCGCATATAGACCTTGTTTGTGTG  741

seq1  AAGTCTGAGCTGTGCTTTGTCTGTGAATACTTTGGGAATTTCCAGATGGG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTGAGCTGTGCTTTGTCTGTGAATACTTTGGGAATTTCCAGATGGG  791

seq1  TCAGAATACAGCTCTGTCTCGGTCTTCACCAGTAGAAGTTAGGTCAGGTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAATACAGCTCTGTCTCGGTCTTCACCAGTAGAAGTTAGGTCAGGTT  841

seq1  CTTCCTCTTAGTCCCATACTCCCAGAAATAAGACTCAGACTCAAAATACA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTCTTAGTCCCATACTCCCAGAAATAAGACTCAGACTCAAAATACA  891

seq1  GTTACAAATACCTTGCCATATAGCTAGACTCTTCTCTGATTAGATCATAA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACAAATACCTTGCCATATAGCTAGACTCTTCTCTGATTAGATCATAA  941

seq1  CTTAAAATAACTCATATATTCTACTCTACATTTTGTCATGTGGCTGGTTA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAATAACTCATATATTCTACTCTACATTTTGTCATGTGGCTGGTTA  991

seq1  CCAGTGCCCAGGTACCATATGCTCATCTCATGATGTAATTCCAGGCAAAT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGCCCAGGTACCATATGCTCATCTCATGATGTAATTCCAGGCAAAT  1041

seq1  CTCTTGTGCTGGGCACTCTCCCAGAATTC  1077
      |||||||||||||||||||||||||||||
seq2  CTCTTGTGCTGGGCACTCTCCCAGAATTC  1070