BAC Information

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BAC

Clone NameB6Ng01-155E10
Chromosome1 (Build37)
Map Location 27,731,130 - 27,732,300
singlet/doubletsinglet
Overlap genenone
Upstream gene4931408C20Rik, LOC677427
Downstream geneLOC100040952, EG433281, EG665903
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155E10.bB6Ng01-155E10.g
ACCDH950106DH950107
length1,1451,217
definitionDH950106|Mus musculus domesticus DNA, BAC clone: B6Ng01-155E10, 5' end.DH950107|Mus musculus domesticus DNA, BAC clone: B6Ng01-155E10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaagatttttttcaccttgcccctccaaccccatcctccctttt
gtacactggactctaatcctgggtgattacccctaaggaagaaatagtga
tcattgttgttaatattctgtgatggctaaacctaggagctaatgtagag
agtagggagctgagattaagaattgcacttctcaggtttgtaggatagtt
tcttccacctaaactccattatggctgctgattcctgcttttactgacaa
cctaatgtctaaccttcttcagtaagggacagttgctgccaatggatttc
tctgcttggaattctcttcctggaatatttcacattttttcctttcacta
ttctctattaacatttatattaggggagttttgtgtgattttttatatga
gactcctggtttagcaatactcatatctttggtgttgtatgacagcacaa
agaacaagcttgtcctttaatctcagcacttgggaggcagaggcaggtgg
atttctgagttcaaggccagcctggtctacaaaatgagttccaggacagt
cagtgcaatatagagaaaccctgtctcgaaaaacaaacaaacaaacaaac
aaaacaaaacaaaacaaaacaaaaatacaaccttgtctttattcttttct
tctgtatttccttcccagattctatacataagattggaggatacctttac
attatggatgattgatcattacagagaaagaaccagaaagcagggtggag
gatgataaaaagttcataaaagcagagcttccgaattgaaatgtttgcac
acaattattaacaacagaactatggtaaacagtatgactgtactgcctgt
gaagctgttaagtagaaataaccgtatcaacatacagggatggtctttgt
aagctctgtaatagtattttaaacatgaacactataatgcatttattata
taatgaattgtaaggctacagaaagaagccacatgaggcaaatattagaa
gttcttatgtaaattttagtgttatttaagaaaataagagccctacaaag
tttaatagagctaaatgataatgcaaaaaagtaaaaaaagaagctaatgt
gttaagcaaattattttaattcttgatgaaacattaattcttcta
gaattccagtgaaatcggggaaaagacaaggatgaccactctccacacca
ctgtatctattcaatatagtactggaagttttagctagaaaaataagaca
acaaaaagagatcaagggagtacaaattggtaaagaagaaataaaggtat
cactccttgcaggtgatatgatagtatacataagcgaccgcaaaaattct
accagagaacttctacagctgataaacaacttcagtaaagtggccagata
taaaattaactcaaataaatcagtagccttcctttatacaaaggataaac
aggctaagaaattagggaaacaactcctttcacaatagccacaaataata
tgaaatatcatggggtaatcctaaccaaacagatgaaagaccttgtactg
gctagttttgtgtcaacttgacacagctgagttatcacagagaaaggagc
ttcagttgaggaaatgcctccatgagatacaactgtaaggcattttctca
tctagtgatcaagggggaaaggccccttgtgggtaggaccatctctgggc
tggtagtcttgtttctataagagagcaggctgagcaagccaggggaagca
agccagtaaagaacattcctccatggcctctgcatcagctcctgcttcct
gacctgcttgagttccagtcctgacttcctttggtgatgaaaagcagtat
ggaagtgtaagctgaataagccctttcctccccaacttgcttcctggtca
caatgtttgtgcaggaatagaaaccctgactaagacaacctgtatgaaaa
taacttcaagtctctcaagaaagaaatcaaagaagatctcagaaaaatca
agggatctcccatgcttatggattggaacaattaacatagtaaaaaaggc
catcctaccaaaggcagtctatagattcaatgtaatcgccaccaaaatcc
caacacaaatcttcaaaaacatggaagagcaattctcaaattcagctgga
aagtgaactaccaacaacaacagcaaataaaatcaataacactatactaa
acaaaaaagatgcaaccgtcttaacaataaagacgctggggatcccttct
gactcagctttctcgagcatataataaatgcattgactggtcagaacaga
ccggtctatatgaataagtgaatcgtgaaataaagcacccatctcataga
tccgtgtacatctcgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_27731130_27732300
seq2: B6Ng01-155E10.b_46_1190

seq1  GAATTCTAAGATTTTTTTCACCTTGCCCCTCCAACCCCATCCTCCCTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAGATTTTTTTCACCTTGCCCCTCCAACCCCATCCTCCCTTTT  50

seq1  GTACACTGGACTCTAATCCTGGGTGATTACCCCTAAGGAAGAAATAGTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACACTGGACTCTAATCCTGGGTGATTACCCCTAAGGAAGAAATAGTGA  100

seq1  TCATTGTTGTTAATATTCTGTGATGGCTAAACCTAGGAGCTAATGTAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGTTGTTAATATTCTGTGATGGCTAAACCTAGGAGCTAATGTAGAG  150

seq1  AGTAGGGAGCTGAGATTAAGAATTGCACTTCTCAGGTTTGTAGGATAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGGGAGCTGAGATTAAGAATTGCACTTCTCAGGTTTGTAGGATAGTT  200

seq1  TCTTCCACCTAAACTCCATTATGGCTGCTGATTCCTGCTTTTACTGACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCACCTAAACTCCATTATGGCTGCTGATTCCTGCTTTTACTGACAA  250

seq1  CCTAATGTCTAACCTTCTTCAGTAAGGGACAGTTGCTGCCAATGGATTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAATGTCTAACCTTCTTCAGTAAGGGACAGTTGCTGCCAATGGATTTC  300

seq1  TCTGCTTGGAATTCTCTTCCTGGAATATTTCACATTTTTTCCTTTCACTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTTGGAATTCTCTTCCTGGAATATTTCACATTTTTTCCTTTCACTA  350

seq1  TTCTCTATTAACATTTATATTAGGGGAGTTTTGTGTGATTTTTTATATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTATTAACATTTATATTAGGGGAGTTTTGTGTGATTTTTTATATGA  400

seq1  GACTCCTGGTTTAGCAATACTCATATCTTTGGTGTTGTATGACAGCACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCCTGGTTTAGCAATACTCATATCTTTGGTGTTGTATGACAGCACAA  450

seq1  AGAACAAGCTTGTCCTTTAATCTCAGCACTTGGGAGGCAGAGGCAGGTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAAGCTTGTCCTTTAATCTCAGCACTTGGGAGGCAGAGGCAGGTGG  500

seq1  ATTTCTGAGTTCAAGGCCAGCCTGGTCTACAAAATGAGTTCCAGGACAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGAGTTCAAGGCCAGCCTGGTCTACAAAATGAGTTCCAGGACAGT  550

seq1  CAGTGCAATATAGAGAAACCCTGTCTCGAAAAACAAACAAACAAACAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCAATATAGAGAAACCCTGTCTCGAAAAACAAACAAACAAACAAAC  600

seq1  AAAACAAAACAAAACAAAACAAAAATACAACCTTGTCTTTATTCTTTTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAAACAAAACAAAACAAAAATACAACCTTGTCTTTATTCTTTTCT  650

seq1  TCTGTATTTCCTTCCCAGATTCTATACATAAGATTGGAGGATACCTTTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTATTTCCTTCCCAGATTCTATACATAAGATTGGAGGATACCTTTAC  700

seq1  ATTATGGATGATTGATCATTACAGAGAAAGAACCAGAAAGCAGGGTGGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGGATGATTGATCATTACAGAGAAAGAACCAGAAAGCAGGGTGGAG  750

seq1  GATGATAAAAAGTTCATAAAAGCAGAGCTTCCGAATTGAAATGTTTGCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATAAAAAGTTCATAAAAGCAGAGCTTCCGAATTGAAATGTTTGCAC  800

seq1  ACAATTATTAACAACAGAACTATGGTAAACAGTATGACTGTACTGCCTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTATTAACAACAGAACTATGGTAAACAGTATGACTGTACTGCCTGT  850

seq1  GAAGCTGTTAAGTAGAAATAACCGTATCAACATACAGGGATGGTCTTTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTGTTAAGTAGAAATAACCGTATCAACATACAGGGATGGTCTTTGT  900

seq1  AAAGCCTCTGTAATAGTATTTTAAACATGAACACTATAATGCATTTATTA  950
      ||   |||||||||||||||||||||||||||||||||||||||||||||
seq2  AA--GCTCTGTAATAGTATTTTAAACATGAACACTATAATGCATTTATTA  948

seq1  TATAAATGAATTGTAAGGCTACAGAAAGAAGCCACAATGAGGCAAAATAT  1000
      ||| ||||||||||||||||||||||||||||||| ||||||| ||||||
seq2  TAT-AATGAATTGTAAGGCTACAGAAAGAAGCCAC-ATGAGGC-AAATAT  995

seq1  TAGAAGTTCTTAATGTAAATTTTAGTGGTTATCTAAAGAAAATAAAGAGC  1050
      ||||||||||| |||||||||||||| ||||| | |||||||| ||||||
seq2  TAGAAGTTCTT-ATGTAAATTTTAGT-GTTAT-TTAAGAAAAT-AAGAGC  1041

seq1  CCTACAAAAGTTTAATTAAGAAGCTAAAATGGATAATGCAAAAAAAAGTT  1100
      ||||| ||||||||||  || |||||||   ||||||||  |||||||| 
seq2  CCTAC-AAAGTTTAAT--AG-AGCTAAA--TGATAATGC--AAAAAAGT-  1082

seq1  AAAAAAAAGAAGCTAAAATGTGTTAAGCAATATTTATATTAATTCTTTGA  1150
       |||||||||||||  |||||||||||||  | |||| ||||||| ||||
seq2  -AAAAAAAGAAGCT--AATGTGTTAAGCA--AATTATTTTAATTC-TTGA  1126

seq1  TGAAACATATTAATTCTTCTA  1171
      ||||||  |||||||||||||
seq2  TGAAAC--ATTAATTCTTCTA  1145