BAC Information

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BAC

Clone NameB6Ng01-155F21
Chromosome1 (Build37)
Map Location 112,277,843 - 112,278,979
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666508, Cdh7
Downstream geneLOC100041429, EG626652, Cdh19
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155F21.bB6Ng01-155F21.g
ACCDH950171DH950172
length1,2631,134
definitionDH950171|Mus musculus domesticus DNA, BAC clone: B6Ng01-155F21, 5' end.DH950172|Mus musculus domesticus DNA, BAC clone: B6Ng01-155F21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgctgtaagatctagaatcgataaatggaacctcataaaattac
agaacttctgcaaggcaaaagacactgtcaataagacaaaaagaccacca
acagatggggaaaggatctttacctatcccaaatcagataggggactaac
atccaatatatctaaagaactcaagaaggtggactccagaaaatcaaata
atccccttaaaaatggggctcagagctaaacaaagaattctcacctgatg
agtactaaatgactgagaagcaccggaaaaaatgttcaacgtccttaatc
atcagggaaatgcaaatcaaaacaaccctgagattccatctcacatcagt
cagaatggctaagatcaaaaattcaggtgacagcagattctggtgaggat
gtggaggaagaggaacactcttccattgttggtgggattgatagcttgta
caaccactttggaaatcagtctgatggttcctcagaaaactggacacagt
actaccggaggatccagcaatctcctgggcatatacccagatgatgttcc
aactggtaagaaggacacatgctcctatgttcatagcagccttatttata
atagccagaagctggaaagaacccagatgcccctcaacagaggaatggat
acagaaaatgtggtacattgacacaatggagtactactcagctattaaaa
agattgaatttatgaaatgcctaggcaaatggatgtacctggagggcatc
atcctgagtgaggtaacccaatcacaaaataactcacacagtatatactc
actgataaattgatattagcccagatacttagaacgcccaagatataaga
tacaatttgctaaacacatgtaactcaagaagaacgaagaccaaagtgtg
gacactttgccccttctcagaattaggaacaatatacccacgtaagagtt
atggagacaaagtttagagctgaaacaaaagatgaaccatctagagactg
ccatatctgggatcgttcccatatcagcttcaaatgctgacaccatgcat
acactagcaagatttgctgaaagatccagatagagctgtttctgtgaaac
tagctgggctagcaaactaagaagtggattcctcacagttagctatttga
gtgatcctgggttcattggaggactagagagagatccatggactgcagat
ctggcaccctaaggtggacaaaatatgaatcctacctggaatctccgcag
cagaccgttggac
gaattctgtcatattgaaaatatattttaaatatcacattattattgtta
ttattattattaggattttgctggttaaagtaatgagatcaatagaaaaa
tgttattgtttctttttttgaccttgagtatttttcaataatggcagttg
atctatccgtatgttcagaaaattacccagtattcattaggatacacaca
cacttcagatctgacatctcaactctgtacacaagttatttttaatatgg
tccttgtgttatataatatcttcatgcatttatttatattaagacaaatt
aatatatgaaagtagtcaggataatatggcttctgtctgtgtgattttcc
ttatttgaatgctgcattctgcttacatatcatttgcaaatgtttgtata
aagtaatcaaaaaagaaagggatggccttaacatcaagcaaatattttaa
tcttgaaacaagtctatggtgtctagtcccagacattttatttttgtgag
acaaatatggagtacagttagaagagtgttttattcttaaataatattca
aatattgggattaattattactacaaaaatcactgttatgtaatgtattc
atcattaaagaaaaatttaaaatacatataaagctggaatttataattta
aaaatccaaatgtacaaatcccttgagattggaattataattattttata
cattttgactatactaacttgtatacaattaagtccatataattcattat
acatgccattgttagcattcaatataacttaatcacatgtcattatcttg
tctataattagttcaggtttcaatgttttattagatattttctttattca
catttcaaatgttatccccttttctgacttccctccctcccagaaacacc
ctaccacatcctccatacccttgtttctatgaggtgttcctgggcacata
cccagagatgctccagatgtaataaggacacatgctccactatgttcata
gcatccttatttatcatagccagagctggaaagaacaaggatgttctttc
aacagaatgaatggtatcaaaaatgtggttcagtttccacaatggaggta
ctcagatttaaaatgataaatcccgtgaaattct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_112277843_112278979
seq2: B6Ng01-155F21.g_66_1199

seq1  GAATTCTGTCATATTGAAAATATATTTTAAATATCACATTATTATTGTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTCATATTGAAAATATATTTTAAATATCACATTATTATTGTTA  50

seq1  TTATTATTATTAGGATTTTGCTGGTTAAAGTAATGAGATCAATAGAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATTATTAGGATTTTGCTGGTTAAAGTAATGAGATCAATAGAAAAA  100

seq1  TGTTATTGTTTCTTTTTTTGACCTTGAGTATTTTTCAATAATGGCAGTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATTGTTTCTTTTTTTGACCTTGAGTATTTTTCAATAATGGCAGTTG  150

seq1  ATCTATCCGTATGTTCAGAAAATTACCCAGTATTCATTAGGATACACACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATCCGTATGTTCAGAAAATTACCCAGTATTCATTAGGATACACACA  200

seq1  CACTTCAGATCTGACATCTCAACTCTGTACACAAGTTATTTTTAATATGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCAGATCTGACATCTCAACTCTGTACACAAGTTATTTTTAATATGG  250

seq1  TCCTTGTGTTATATAATATCTTCATGCATTTATTTATATTAAGACAAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGTGTTATATAATATCTTCATGCATTTATTTATATTAAGACAAATT  300

seq1  AATATATGAAAGTAGTCAGGATAATATGGCTTCTGTCTGTGTGATTTTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATATGAAAGTAGTCAGGATAATATGGCTTCTGTCTGTGTGATTTTCC  350

seq1  TTATTTGAATGCTGCATTCTGCTTACATATCATTTGCAAATGTTTGTATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTGAATGCTGCATTCTGCTTACATATCATTTGCAAATGTTTGTATA  400

seq1  AAGTAATCAAAAAAGAAAGGGATGGCCTTAACATCAAGCAAATATTTTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAATCAAAAAAGAAAGGGATGGCCTTAACATCAAGCAAATATTTTAA  450

seq1  TCTTGAAACAAGTCTATGGTGTCTAGTCCCAGACATTTTATTTTTGTGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGAAACAAGTCTATGGTGTCTAGTCCCAGACATTTTATTTTTGTGAG  500

seq1  ACAAATATGGAGTACAGTTAGAAGAGTGTTTTATTCTTAAATAATATTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATATGGAGTACAGTTAGAAGAGTGTTTTATTCTTAAATAATATTCA  550

seq1  AATATTGGGATTAATTATTACTACAAAAATCACTGTTATGTAATGTATTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTGGGATTAATTATTACTACAAAAATCACTGTTATGTAATGTATTC  600

seq1  ATCATTAAAGAAAAATTTAAAATACATATAAAGCTGGAATTTATAATTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTAAAGAAAAATTTAAAATACATATAAAGCTGGAATTTATAATTTA  650

seq1  AAAATCCAAATGTACAAATCCCTTGAGATTGGAATTATAATTATTTTATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCCAAATGTACAAATCCCTTGAGATTGGAATTATAATTATTTTATA  700

seq1  CATTTTGACTATACTAACTTGTATACAATTAAGTCCATATAATTCATTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTGACTATACTAACTTGTATACAATTAAGTCCATATAATTCATTAT  750

seq1  ACATGCCATTGTTAGCATTCAATATAACTTAATCACATGTCATTATCTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCCATTGTTAGCATTCAATATAACTTAATCACATGTCATTATCTTG  800

seq1  TCTATAATTAGTTCAGGTTTCAATGTTTTATTAGATATTTTCTTTATTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATAATTAGTTCAGGTTTCAATGTTTTATTAGATATTTTCTTTATTCA  850

seq1  CATTTCAAATGTTATCCCCTTTCCTGACTTCCCTCCCTCCCAGAAACACC  900
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CATTTCAAATGTTATCCCCTTTTCTGACTTCCCTCCCTCCCAGAAACACC  900

seq1  CTACCACATCCTCCATACCCTTGTTTCTATGAGGGTGTTCCTGGGCACAT  950
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CTACCACATCCTCCATACCCTTGTTTCTATGA-GGTGTTCCTGGGCACAT  949

seq1  ACCCAGAAGATGCTCCAAGATGTAATAAGGACACATGCTCCACTATGTTC  1000
      |||||| ||||||||| |||||||||||||||||||||||||||||||||
seq2  ACCCAG-AGATGCTCC-AGATGTAATAAGGACACATGCTCCACTATGTTC  997

seq1  ATAGCATCCTTATTTATCATAGCCAGGAGCTGGAAAGAACACAGATGTTC  1050
      ||||||||||||||||||||||||| |||||||||||||||  |||||||
seq2  ATAGCATCCTTATTTATCATAGCCA-GAGCTGGAAAGAACAAGGATGTTC  1046

seq1  -TTCAACAG-ATGAATGGATACAGAAAATGTGGTACAG-TTACACAATGG  1097
       |||||||| |||||||| ||   |||||||||| ||| || ||||||||
seq2  TTTCAACAGAATGAATGG-TATCAAAAATGTGGTTCAGTTTCCACAATGG  1095

seq1  AGTAACTCAGATATTAAAAATGATGAAT-TCGTGAAATTCT  1137
      ||  ||||||  ||| |||||||| |||  |||||||||||
seq2  AGGTACTCAG--ATTTAAAATGATAAATCCCGTGAAATTCT  1134