BAC Information

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BAC

Clone NameB6Ng01-156F11
Chromosome1 (Build37)
Map Location 121,808,596 - 121,975,448
singlet/doubletdoublet
Overlap geneTmem177, Gm101, Sctr, Tmem37
Upstream geneGli2, LOC666838, LOC100041778, Inhbb, Ralb, Tmem185b, Epb4.1l5, Ptpn4, LOC100042447, LOC666870, LOC100041863
Downstream geneDbi, 3110009E18Rik, Steap3, C1ql2, Marco, En1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-156F11.bB6Ng01-156F11.g
ACCDH950870DH950871
length1591,118
definitionDH950870|Mus musculus domesticus DNA, BAC clone: B6Ng01-156F11, 5' end.DH950871|Mus musculus domesticus DNA, BAC clone: B6Ng01-156F11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(121,975,290 - 121,975,448)(121,808,596 - 121,809,728)
sequence
cagaccaatctggacaacacagcgagatccagtctctaaagtataattaa
ttaatcttgcgtctatccattcttgtgactgtgtatatgcagagaacaac
ctcaaaattttgttcctcaggagccatctactttattggtggtggtggtg
gtggtggtg
gaattcactggattcagtcagtctaagaaaaaaaaaatcatacttcagag
cccataccacaacagtttatttccagctgtgaaaagggatgcagctggac
aggtttattggccaaaaccacaagtggcagtgtcacatgctgcctagtgt
ccctacttccaccaagctcccatggttgagccacatttccattatcttac
gaggtggctgtatttggagcttcggcctatcattgaaatagaaacggaag
gttcgtgggatagcaatactcagatctcactgctttcgagctcagatccg
gacacatacagaaaaaataccacatgaagatccaggggtaagatggccat
ttgttagccttgctgaaatacccagggagcctagcttggccacacctgag
tcttggacctccagctctggaactaagaaaaaataaactcctgttgttca
ggtcattcctcatgagacacttttcttggcaggctaaccactgatagcaa
aggttcggtatttgatcacgggccgttagagattcatagcaagctgttca
ccttaaaaatgttatctattatatatacacaaacagaccaaacagaccat
ccacctcactcattagcaaagttaatattgtttttaaagttaattggtgg
tggttttttttttgagacaaagtctcacaggcgcacttttgaatattctg
ggcaccttatttcgtctgtgattatgtcactatgactgttatttctcttt
ggatgaaatttcactttattcctatctccgcgaagcgtttgattagcaat
gtactactgtaaacaaacgtagggttctgtatcactcatttaactcattc
tttccaagaggaaactgaggctagaaaagacagggttcttgggaagggaa
caaaaaaaaaacaaaaacaaaacaaaacaccttctcccggtcggcttctg
agtctcgcagtggcctagagcagtgtagctctgctttagagagctctcat
tgtgattccgcctgagcacttacgggctgcttcaacaccggaacttgact
gaacccggaagcttggactaaagatgacctcagccaagaaggagagctac
tcggtagcaactttagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_121975290_121975448
seq2: B6Ng01-156F11.b_52_210 (reverse)

seq1  CACCACCACCACCACCACCACCAATAAAGTAGATGGCTCCTGAGGAACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACCACCACCACCACCACCAATAAAGTAGATGGCTCCTGAGGAACAA  50

seq1  AATTTTGAGGTTGTTCTCTGCATATACACAGTCACAAGAATGGATAGACG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTGAGGTTGTTCTCTGCATATACACAGTCACAAGAATGGATAGACG  100

seq1  CAAGATTAATTAATTATACTTTAGAGACTGGATCTCGCTGTGTTGTCCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATTAATTAATTATACTTTAGAGACTGGATCTCGCTGTGTTGTCCAG  150

seq1  ATTGGTCTG  159
      |||||||||
seq2  ATTGGTCTG  159

seq1: chr1_121808596_121809728
seq2: B6Ng01-156F11.g_67_1184

seq1  GAATTCACTGGATTCAGTCAGTCTAAGAAAAAAAAAATCATACTTCAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGGATTCAGTCAGTCTAAGAAAAAAAAAATCATACTTCAGAG  50

seq1  CCCATACCACAACAGTTTATTTCCAGCTGTGAAAAGGGATGCAGCTGGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATACCACAACAGTTTATTTCCAGCTGTGAAAAGGGATGCAGCTGGAC  100

seq1  AGGTTTATTGGCCAAAACCACAAGTGGCAGTGTCACATGCTGCCTAGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTATTGGCCAAAACCACAAGTGGCAGTGTCACATGCTGCCTAGTGT  150

seq1  CCCTACTTCCACCAAGCTCCCATGGTTGAGCCACATTTCCATTATCTTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTACTTCCACCAAGCTCCCATGGTTGAGCCACATTTCCATTATCTTAC  200

seq1  GAGGTGGCTGTATTTGGAGCTTCGGCCTATCATTGAAATAGAAACGGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTGGCTGTATTTGGAGCTTCGGCCTATCATTGAAATAGAAACGGAAG  250

seq1  GTTCGTGGGATAGCAATACTCAGATCTCACTGCTTTCGAGCTCAGATCCG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCGTGGGATAGCAATACTCAGATCTCACTGCTTTCGAGCTCAGATCCG  300

seq1  GACACATACAGAAAAAATACCACATGAAGATCCAGGGGTAAGATGGCCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACATACAGAAAAAATACCACATGAAGATCCAGGGGTAAGATGGCCAT  350

seq1  TTGTTAGCCTTGCTGAAATACCCAGGGAGCCTAGCTTGGCCACACCTGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAGCCTTGCTGAAATACCCAGGGAGCCTAGCTTGGCCACACCTGAG  400

seq1  TCTTGGACCTCCAGCTCTGGAACTAAGAAAAAATAAACTCCTGTTGTTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGACCTCCAGCTCTGGAACTAAGAAAAAATAAACTCCTGTTGTTCA  450

seq1  GGTCATTCCTCATGAGACACTTTTCTTGGCAGGCTAACCACTGATAGCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATTCCTCATGAGACACTTTTCTTGGCAGGCTAACCACTGATAGCAA  500

seq1  AGGTTCGGTATTTGATCACGGGCCGTTAGAGATTCATAGCAAGCTGTTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCGGTATTTGATCACGGGCCGTTAGAGATTCATAGCAAGCTGTTCA  550

seq1  CCTTAAAAATGTTATCTATTATATATACACAAACAGACCAAACAGACCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAAAAATGTTATCTATTATATATACACAAACAGACCAAACAGACCAT  600

seq1  CCACCTCACTCATTAGCAAAGTTAATATTGTTTTTAAAGTTAATTGGTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTCACTCATTAGCAAAGTTAATATTGTTTTTAAAGTTAATTGGTGG  650

seq1  TGGTTTTTTTTTTGAGACAAAGTCTCACAGGCGCACTTTTGAATATTCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTTTTTTTTGAGACAAAGTCTCACAGGCGCACTTTTGAATATTCTG  700

seq1  GGCACCTTATTTCGTCTGTGATTATGTCACTATGACTGTTATTTCTCTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACCTTATTTCGTCTGTGATTATGTCACTATGACTGTTATTTCTCTTT  750

seq1  GGATGAAATTTCACTTTATTCCTATCTCCGCGAAGCGTTTGATTAGCAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGAAATTTCACTTTATTCCTATCTCCGCGAAGCGTTTGATTAGCAAT  800

seq1  GTACTACTGTAAACAAAACGTAGGGTTCTGTATCACTCATTTAACTCATT  850
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GTACTACTGTAAAC-AAACGTAGGGTTCTGTATCACTCATTTAACTCATT  849

seq1  CTTTCCAAGAGGAAACTGAGGCTAGAAAAGACAGGGTCCTT-GGAAGGGA  899
      ||||||||||||||||||||||||||||||||||||| ||| ||||||||
seq2  CTTTCCAAGAGGAAACTGAGGCTAGAAAAGACAGGGTTCTTGGGAAGGGA  899

seq1  ACAAAAAAAAAAACAAAAAACAAAAACAAAAACAACCTCTCCCGGGTCGG  949
      ||||||||||||   ||||||||||   |||||| | |||||| ||||||
seq2  ACAAAAAAAAAA--CAAAAACAAAA--CAAAACACCTTCTCCC-GGTCGG  944

seq1  CCTCTGAGTCTCGCAGTTGGCCTAGAAGCAGGTGTAGGCTCTGGCTTTAG  999
      | |||||||||||||| |||||||| |||| ||||| ||||| |||||||
seq2  CTTCTGAGTCTCGCAG-TGGCCTAG-AGCA-GTGTA-GCTCT-GCTTTAG  989

seq1  AAGAGCTCTCAATGTGATTCCGCCCTGA-CACATACCGGGCTGCTTCCAA  1048
       |||||||||| |||||||||| ||||| ||| || |||||||||| |||
seq2  -AGAGCTCTCATTGTGATTCCG-CCTGAGCACTTA-CGGGCTGCTT-CAA  1035

seq1  CAACCGGAACATGACTGAACCCGGAAGC-TGGACATAAGAGAACTCACAG  1097
      | |||||||| ||||||||||||||||| |||||  ||||  || | |||
seq2  C-ACCGGAACTTGACTGAACCCGGAAGCTTGGACTAAAGATGAC-CTCAG  1083

seq1  CCAAG-AGGAGAGCTTACCTCGGTAGCAACCTTAGAA  1133
      ||||| |||||||||   |||||||||||| ||||||
seq2  CCAAGAAGGAGAGCT--ACTCGGTAGCAACTTTAGAA  1118