BAC Information

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BAC

Clone NameB6Ng01-156I17
Chromosome1 (Build37)
Map Location 118,854,754 - 118,855,827
singlet/doubletsinglet
Overlap genenone
Upstream geneCntnap5a
Downstream geneB020011L13Rik, LOC100041684, LOC636972, EG666785
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-156I17.bB6Ng01-156I17.g
ACCDH951022DH951023
length8591,052
definitionDH951022|Mus musculus domesticus DNA, BAC clone: B6Ng01-156I17, 5' end.DH951023|Mus musculus domesticus DNA, BAC clone: B6Ng01-156I17, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaaagaaacaactccttgttttcttgattttttgaatagtcct
ttctttccacattgttgatttcagccataaatttgattatttcctgctgt
ctactctcttgggtgaatttgcttccttttgctctagaacttttaggtgt
actgtcaggctgctaatgtatgctctctctagtttccttttggaggcact
cagagcaatgagttttcctattaggaatgctttcacaggatatgctctca
ctaataggtggatattagcccagaaacttagaatacccaagatacatttt
gcaaatagtacaaaaaaatcaagaagaaggaagaccaaagtctagatact
ttattactccttagaatagggaacaaaatagccatggaaggagttacagg
gacaaagtttggagctaagtaaaaagaatggaccatccagagactacacc
acccagggttccatcccataatcagccaccaaatgcagacactattgcat
atgccagcaagattttgctgacatgatcctaatatagctgtctagtgtga
ggtgatgccagtgcctggcaaatacagaagtggatgctcacagtcatcta
ttggatggaacacaggacacacaatggaggagctagagaaagtacccaag
gagttgaaggggtctgcaaccctaaaggtggaagagcaatatgaactaaa
cagtacccccagagctcctgtctctacctgcatatgtagcagaagatggc
ctagtcggccatcattgtgaagagaggccccttggtcttgcaaattttat
atgcctcagaacaggggaacgccagggccaagaagttggagtaggtgggt
aggggagca

gaattctccatagtctttgaaaaaactaagtattatttgagtcttatcca
ttacgttaaaagtattgtgtgtgcacttgcatgtgaatgagctaatacat
gccctggttagtgactgtggatgggggtcagagggcagctttcagaagcc
agtcttcttccacagtgtcattctctgagactgaatggaggacagtagtt
ggatttcagtggaaatcctttcaaatgttcagccatgtagacatttaacc
catctagaattaattgctgatgatcatatttagagtaaaatattgatatt
tattgttatatacttagaacaaactttcaccactacttagtaatttcagc
aaaagtttgaactgcagtgttctgcgtgatgtgttgacctatcacatgcc
aatcaaactggttttaaacagttctgatcctccattctcctacatactca
ttctctgttgttaattatcacatgttaatgaggctcattttaaactgttc
caatcctacatttttatgttcgcatcccctgttgaaaatgacacactgtc
gtaagaactacaggttctttgaaagcctgacatctcattgagaaaggaat
ggacctctcattttgcagttttgtgactttattctgtgagcttatattgg
atccaactttattggacctagaatctaggaaataagcttcagaacatacc
aatgagagaatacatagattaatttagcctctgggacattcctataagtt
attttcttgattaatttaatatggtagaaacagcaaccctaaagatgggg
ttgcaccactttatgttctgctcatgattcaataacaaagagaagtgtac
ataatgtttaagaggcaatgtgagcaactgtccccaactcctgctggcat
accttccagacttgagcgatttctccctctaccatgacaatagcacatga
aaattagcagtacatagcttcaaatccttcactgctagaattggaggggg
gattctgggccggctggctgaccaatgccagaatcagtggattatttccc
ta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_118854754_118855827
seq2: B6Ng01-156I17.g_66_1117 (reverse)

seq1  TAGGGAAATACAATCCACTGTGAATCTGGCATTTGTCAGCCAGACAGCAC  50
      |||||||||  |||||||  ||| ||||||||| ||||||||| | || |
seq2  TAGGGAAAT--AATCCAC--TGATTCTGGCATTGGTCAGCCAGCCGGC-C  45

seq1  CAGAAATCCCCCCCTTCCAAATTCTAGCAGTTGGAAGGATTTGAAGGCTA  100
      ||| |||||||||  ||| ||||||||||||  |||||||||||| ||||
seq2  CAG-AATCCCCCC--TCC-AATTCTAGCAGT--GAAGGATTTGAA-GCTA  88

seq1  TGTACTGGCTTAATTTTCATGGTGCTATTTTGTCATGGTAGAGGGGAAGA  150
      |||||||   |||||||||| ||||||  ||||||||||||||||  |||
seq2  TGTACTG--CTAATTTTCAT-GTGCTA--TTGTCATGGTAGAGGG--AGA  131

seq1  AATCGCTTCAAGTCTGGAAGGTATGCCAGCAGGAGTTGGGGGACAGTTGC  200
      |||||| |||||||||||||||||||||||||||||| ||||||||||||
seq2  AATCGC-TCAAGTCTGGAAGGTATGCCAGCAGGAGTT-GGGGACAGTTGC  179

seq1  TCACATTGCCTTCTTAAACATTATGTACACTTCTCTTTGTTATTTGAATC  250
      |||||||||| ||||||||||||||||||||||||||||||| |||||||
seq2  TCACATTGCC-TCTTAAACATTATGTACACTTCTCTTTGTTA-TTGAATC  227

seq1  ATGAGCAGAACATAAAGTGGTGCAA-CCCATCTTTAGGGTTGCTGTTTCT  299
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  ATGAGCAGAACATAAAGTGGTGCAACCCCATCTTTAGGGTTGCTGTTTCT  277

seq1  ACCATATTAAATTAATCAAGAAAATAACTTATAGGAATGTCCCAGAGGCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATATTAAATTAATCAAGAAAATAACTTATAGGAATGTCCCAGAGGCT  327

seq1  AAATTAATCTATGTATTCTCTCATTGGTATGTTCTGAAGCTTATTTCCTA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAATCTATGTATTCTCTCATTGGTATGTTCTGAAGCTTATTTCCTA  377

seq1  GATTCTAGGTCCAATAAAGTTGGATCCAATATAAGCTCACAGAATAAAGT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTAGGTCCAATAAAGTTGGATCCAATATAAGCTCACAGAATAAAGT  427

seq1  CACAAAACTGCAAAATGAGAGGTCCATTCCTTTCTCAATGAGATGTCAGG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAACTGCAAAATGAGAGGTCCATTCCTTTCTCAATGAGATGTCAGG  477

seq1  CTTTCAAAGAACCTGTAGTTCTTACGACAGTGTGTCATTTTCAACAGGGG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAAAGAACCTGTAGTTCTTACGACAGTGTGTCATTTTCAACAGGGG  527

seq1  ATGCGAACATAAAAATGTAGGATTGGAACAGTTTAAAATGAGCCTCATTA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCGAACATAAAAATGTAGGATTGGAACAGTTTAAAATGAGCCTCATTA  577

seq1  ACATGTGATAATTAACAACAGAGAATGAGTATGTAGGAGAATGGAGGATC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTGATAATTAACAACAGAGAATGAGTATGTAGGAGAATGGAGGATC  627

seq1  AGAACTGTTTAAAACCAGTTTGATTGGCATGTGATAGGTCAACACATCAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTGTTTAAAACCAGTTTGATTGGCATGTGATAGGTCAACACATCAC  677

seq1  GCAGAACACTGCAGTTCAAACTTTTGCTGAAATTACTAAGTAGTGGTGAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAACACTGCAGTTCAAACTTTTGCTGAAATTACTAAGTAGTGGTGAA  727

seq1  AGTTTGTTCTAAGTATATAACAATAAATATCAATATTTTACTCTAAATAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGTTCTAAGTATATAACAATAAATATCAATATTTTACTCTAAATAT  777

seq1  GATCATCAGCAATTAATTCTAGATGGGTTAAATGTCTACATGGCTGAACA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATCAGCAATTAATTCTAGATGGGTTAAATGTCTACATGGCTGAACA  827

seq1  TTTGAAAGGATTTCCACTGAAATCCAACTACTGTCCTCCATTCAGTCTCA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAAGGATTTCCACTGAAATCCAACTACTGTCCTCCATTCAGTCTCA  877

seq1  GAGAATGACACTGTGGAAGAAGACTGGCTTCTGAAAGCTGCCCTCTGACC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATGACACTGTGGAAGAAGACTGGCTTCTGAAAGCTGCCCTCTGACC  927

seq1  CCCATCCACAGTCACTAACCAGGGCATGTATTAGCTCATTCACATGCAAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCCACAGTCACTAACCAGGGCATGTATTAGCTCATTCACATGCAAG  977

seq1  TGCACACACAATACTTTTAACGTAATGGATAAGACTCAAATAATACTTAG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACACACAATACTTTTAACGTAATGGATAAGACTCAAATAATACTTAG  1027

seq1  TTTTTTCAAAGACTATGGAGAATTC  1074
      |||||||||||||||||||||||||
seq2  TTTTTTCAAAGACTATGGAGAATTC  1052


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